RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 PDIA3P30101 505 aaKnown RBP18.11■□□□□ 0.49
SREBF1-221ENST00000583080 NPEPPSP55786 919 aa18.11■□□□□ 0.49
SREBF1-221ENST00000583080 TDGQ13569 410 aa18.11■□□□□ 0.49
SREBF1-221ENST00000583080 NPY5RQ15761 445 aa18.11■□□□□ 0.49
SREBF1-221ENST00000583080 LETM2Q2VYF4 491 aa18.11■□□□□ 0.49
SREBF1-221ENST00000583080 UBXN11Q5T124 520 aa18.11■□□□□ 0.49
SREBF1-221ENST00000583080 PGBD4Q96DM1 585 aa18.11■□□□□ 0.49
SREBF1-221ENST00000583080 EMILIN2Q9BXX0 1053 aa18.11■□□□□ 0.49
SREBF1-221ENST00000583080 KCNK12Q9HB15 430 aa18.11■□□□□ 0.49
SREBF1-221ENST00000583080 BMP2KQ9NSY1 1161 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-221ENST00000583080 MARCH5Q9NX47 278 aa18.11■□□□□ 0.49
SREBF1-221ENST00000583080 WRAP73Q9P2S5 460 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-221ENST00000583080 COL4A3BPQ9Y5P4 624 aa18.11■□□□□ 0.49
SREBF1-221ENST00000583080 C2CD2LO14523 706 aa18.1■□□□□ 0.49
SREBF1-221ENST00000583080 POMCP01189 267 aa18.1■□□□□ 0.49
SREBF1-221ENST00000583080 PSMC5P62195 406 aa18.1■□□□□ 0.49
SREBF1-221ENST00000583080 MRPL10Q7Z7H8 261 aaKnown RBP18.1■□□□□ 0.49
SREBF1-221ENST00000583080 CCDC105Q8IYK2 499 aa18.1■□□□□ 0.49
SREBF1-221ENST00000583080 SIX5Q8N196 739 aa18.1■□□□□ 0.49
SREBF1-221ENST00000583080 TMEM143Q96AN5 459 aa18.1■□□□□ 0.49
SREBF1-221ENST00000583080 AIFM3Q96NN9 605 aa18.1■□□□□ 0.49
SREBF1-221ENST00000583080 MAN1C1Q9NR34 630 aa18.1■□□□□ 0.49
SREBF1-221ENST00000583080 VAV3Q9UKW4 847 aa18.1■□□□□ 0.49
SREBF1-221ENST00000583080 PRG3Q9Y2Y8 225 aaPredicted RBP18.1■□□□□ 0.49
SREBF1-221ENST00000583080 NRP1O14786 923 aa18.09■□□□□ 0.49
SREBF1-221ENST00000583080 MYBP10242 640 aa18.09■□□□□ 0.49
SREBF1-221ENST00000583080 HOXA11P31270 313 aaPredicted RBP18.09■□□□□ 0.49
SREBF1-221ENST00000583080 C15orf39Q6ZRI6 1047 aa18.09■□□□□ 0.49
SREBF1-221ENST00000583080 TAS1R1Q7RTX1 841 aa18.09■□□□□ 0.49
SREBF1-221ENST00000583080 BLIDQ8IZY5 108 aa18.09■□□□□ 0.49
SREBF1-221ENST00000583080 RSAD2Q8WXG1 361 aa18.09■□□□□ 0.49
SREBF1-221ENST00000583080 TMEM175Q9BSA9 504 aa18.09■□□□□ 0.49
SREBF1-221ENST00000583080 HERC2P3Q9BVR0 1158 aa18.09■□□□□ 0.49
SREBF1-221ENST00000583080 C22orf23Q9BZE7 217 aa18.09■□□□□ 0.49
SREBF1-221ENST00000583080 MRPL17Q9NRX2 175 aaKnown RBP18.09■□□□□ 0.49
SREBF1-221ENST00000583080 DDX25Q9UHL0 483 aaKnown RBP18.09■□□□□ 0.49
SREBF1-221ENST00000583080 FBXL21Q9UKT6 434 aa18.09■□□□□ 0.49
SREBF1-221ENST00000583080 FAN1Q9Y2M0 1017 aa18.09■□□□□ 0.49
SREBF1-221ENST00000583080 CNTNAP2Q9UHC6 1331 aa18.08■□□□□ 0.49
SREBF1-221ENST00000583080 ARID2Q68CP9 1835 aa18.08■□□□□ 0.48
SREBF1-221ENST00000583080 F8W810 466 aa18.08■□□□□ 0.48
SREBF1-221ENST00000583080 SOD2P04179 222 aa18.08■□□□□ 0.48
SREBF1-221ENST00000583080 URODP06132 367 aa18.08■□□□□ 0.48
SREBF1-221ENST00000583080 SRGAP2CP0DJJ0 459 aa18.08■□□□□ 0.48
SREBF1-221ENST00000583080 AK2P54819 239 aa18.08■□□□□ 0.48
SREBF1-221ENST00000583080 EVCP57679 992 aa18.08■□□□□ 0.48
SREBF1-221ENST00000583080 TOB2Q14106 344 aaPredicted RBP18.08■□□□□ 0.48
SREBF1-221ENST00000583080 ANGPT1Q15389 498 aa18.08■□□□□ 0.48
SREBF1-221ENST00000583080 INF2Q27J81 1249 aa18.08■□□□□ 0.48
SREBF1-221ENST00000583080 MOXD1Q6UVY6 613 aa18.08■□□□□ 0.48
SREBF1-221ENST00000583080 ADSSL1Q8N142 457 aa18.08■□□□□ 0.48
SREBF1-221ENST00000583080 DAGLBQ8NCG7 672 aa18.08■□□□□ 0.48
SREBF1-221ENST00000583080 SMG8Q8ND04 991 aaKnown RBP18.08■□□□□ 0.48
SREBF1-221ENST00000583080 PRPF31Q8WWY3 499 aaKnown RBP18.08■□□□□ 0.48
SREBF1-221ENST00000583080 FAM193BQ96PV7 902 aaPredicted RBP18.08■□□□□ 0.48
SREBF1-221ENST00000583080 JPH2Q9BR39 696 aaPredicted RBP18.08■□□□□ 0.48
SREBF1-221ENST00000583080 DHX33Q9H6R0 707 aaKnown RBP18.08■□□□□ 0.48
SREBF1-221ENST00000583080 DCHS1Q96JQ0 3298 aa18.08■□□□□ 0.48
SREBF1-221ENST00000583080 TEX28O15482 410 aa18.07■□□□□ 0.48
SREBF1-221ENST00000583080 CFHP08603 1231 aa18.07■□□□□ 0.48
SREBF1-221ENST00000583080 QARSP47897 775 aaKnown RBP18.07■□□□□ 0.48
SREBF1-221ENST00000583080 SSRP1Q08945 709 aaKnown RBP18.07■□□□□ 0.48
SREBF1-221ENST00000583080 LAMTOR4Q0VGL1 99 aa18.07■□□□□ 0.48
SREBF1-221ENST00000583080 NONOQ15233 471 aaKnown RBP eCLIP18.07■□□□□ 0.48
SREBF1-221ENST00000583080 SRGAP1Q7Z6B7 1085 aa18.07■□□□□ 0.48
SREBF1-221ENST00000583080 TRIM22Q8IYM9 498 aa18.07■□□□□ 0.48
SREBF1-221ENST00000583080 DTWD2Q8NBA8 298 aa18.07■□□□□ 0.48
SREBF1-221ENST00000583080 CMASQ8NFW8 434 aaPredicted RBP18.07■□□□□ 0.48
SREBF1-221ENST00000583080 SLC7A3Q8WY07 619 aa18.07■□□□□ 0.48
SREBF1-221ENST00000583080 CEP170P1Q96L14 293 aa18.07■□□□□ 0.48
SREBF1-221ENST00000583080 RPS6KC1Q96S38 1066 aa18.07■□□□□ 0.48
SREBF1-221ENST00000583080 DOCK8Q8NF50 2099 aa18.07■□□□□ 0.48
SREBF1-221ENST00000583080 CLUHO75153 1309 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 KRBA1A5PL33 1030 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 INPPL1O15357 1258 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 RFPL2O75678 378 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 EFEMP2O95967 443 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 ALDH2P05091 517 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 NCLP19338 710 aaKnown RBP18.06■□□□□ 0.48
SREBF1-221ENST00000583080 GBP2P32456 591 aaPredicted RBP18.06■□□□□ 0.48
SREBF1-221ENST00000583080 FOXK2Q01167 660 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 PPP2R5CQ13362 524 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 EMC2Q15006 297 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 CENPQQ7L2Z9 268 aaPredicted RBP18.06■□□□□ 0.48
SREBF1-221ENST00000583080 COLGALT2Q8IYK4 626 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 RNF168Q8IYW5 571 aaPredicted RBP18.06■□□□□ 0.48
SREBF1-221ENST00000583080 PSPC1Q8WXF1 523 aaKnown RBP18.06■□□□□ 0.48
SREBF1-221ENST00000583080 MYADMQ96S97 322 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 RTP3Q9BQQ7 232 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 LARP6Q9BRS8 491 aaKnown RBP18.06■□□□□ 0.48
SREBF1-221ENST00000583080 EIF2AQ9BY44 585 aaKnown RBP18.06■□□□□ 0.48
SREBF1-221ENST00000583080 RNF39Q9H2S5 420 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 WDR6Q9NNW5 1121 aaKnown RBP18.06■□□□□ 0.48
SREBF1-221ENST00000583080 KCNMB3Q9NPA1 279 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 IGSF9Q9P2J2 1179 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 KANSL3Q9P2N6 904 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 STK39Q9UEW8 545 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 IPPQ9Y573 584 aa18.06■□□□□ 0.48
SREBF1-221ENST00000583080 CCDC195A0A1B0GUA6 201 aa18.05■□□□□ 0.48
SREBF1-221ENST00000583080 DEXIO95424 95 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms