RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	PPP4R3CP	Q6ZMV5	832 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	ZBTB8OS	Q8IWT0	167 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	ASAP3	Q8TDY4	903 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	CSRNP2	Q9H175	543 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	CLDND1	Q9NY35	253 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	PRKAG3	Q9UGI9	489 aa		13.96	□□□□□ -0.17
CDK5RAP3-222	ENST00000581708	ATG2A	Q2TAZ0	1938 aa		13.96	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	PLXNA4	Q9HCM2	1894 aa		13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	PHLPP2	Q6ZVD8	1323 aa		13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	NAMPT	P43490	491 aa		13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	ATP2C1	P98194	919 aa	Predicted RBP	13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	AMHR2	Q16671	573 aa		13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	FAM187B	Q17R55	369 aa		13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	UBXN11	Q5T124	520 aa		13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	BRAP	Q7Z569	592 aa		13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	SLC39A11	Q8N1S5	342 aa		13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	MICAL1	Q8TDZ2	1067 aa		13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	KIFAP3	Q92845	792 aa		13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	TIPIN	Q9BVW5	301 aa		13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	RSAD1	Q9HA92	442 aa		13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	KCNG1	Q9UIX4	513 aa		13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	DNM3	Q9UQ16	869 aa		13.95	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708		A0A1B0GUA9	196 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	SRGAP2B	P0DMP2	458 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	ITGA4	P13612	1032 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	LTBR	P36941	435 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	EFNA5	P52803	228 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	BCAR1	P56945	870 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	RNASEL	Q05823	741 aa	Known RBP	13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	GIT2	Q14161	759 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	NBR1	Q14596	966 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	SLC27A1	Q6PCB7	646 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	AGMO	Q6ZNB7	445 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	SNX29	Q8TEQ0	813 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	TMEM169	Q96HH4	297 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	INTS4	Q96HW7	963 aa	Known RBP	13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	IFT74	Q96LB3	600 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	AK8	Q96MA6	479 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	TMEM175	Q9BSA9	504 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	NT5C3A	Q9H0P0	336 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	FZD8	Q9H461	694 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	TLE6	Q9H808	572 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	TBC1D13	Q9NVG8	400 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	KIAA1024	Q9UPX6	916 aa		13.94	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	MUC3A	Q02505	3323 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	TCF20	Q9UGU0	1960 aa	Known RBP	13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	LRRIQ4	A6NIV6	560 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	EYA4	O95677	639 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	ARF4	P18085	180 aa	Predicted RBP	13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	IRS1	P35568	1242 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	ERVFC1	P60507	584 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	COASY	Q13057	564 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	DUSP6	Q16828	381 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	HYI	Q5T013	277 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	TMEM184A	Q6ZMB5	413 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	FAM178B	Q8IXR5	827 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	LPP	Q93052	612 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	TCF25	Q9BQ70	676 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	TRIM6	Q9C030	488 aa	Predicted RBP	13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	BHMT2	Q9H2M3	363 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	C17orf75	Q9HAS0	396 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	DDX19A	Q9NUU7	478 aa	Known RBP	13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	HCST	Q9UBK5	93 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	GIT1	Q9Y2X7	761 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	IRAK3	Q9Y616	596 aa		13.93	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708		H3BQ06	376 aa	Predicted RBP	13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	N4BP3	O15049	544 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	GALT	P07902	379 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	NRIP1	P48552	1158 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	NDUFV1	P49821	464 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	SMAD4	Q13485	552 aa	Known RBP	13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	SMC1A	Q14683	1233 aa	Known RBP	13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	MAPK6	Q16659	721 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	EP400NL	Q6ZTU2	488 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	TMC7	Q7Z402	723 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	DDX53	Q86TM3	631 aa	Known RBP	13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	MRPL43	Q8N983	215 aa	Known RBP	13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	SMG8	Q8ND04	991 aa	Known RBP	13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	DEPTOR	Q8TB45	409 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	IGSF21	Q96ID5	467 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	MSLNL	Q96KJ4	702 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	DRC1	Q96MC2	740 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	POP1	Q99575	1024 aa	Known RBP	13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	IGFLR1	Q9H665	355 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	NRDE2	Q9H7Z3	1164 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	GPRC5C	Q9NQ84	441 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	ENTPD7	Q9NQZ7	604 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	KCND2	Q9NZV8	630 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	CD207	Q9UJ71	328 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	IPP	Q9Y573	584 aa		13.92	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	ACKR2	O00590	384 aa		13.91	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	NR1I2	O75469	434 aa		13.91	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	ALDH2	P05091	517 aa		13.91	□□□□□ -0.18
CDK5RAP3-222	ENST00000581708	HOXB8	P17481	243 aa	Predicted RBP	13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms