RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 E9PMD0 336 aa19.7■□□□□ 0.74
CTDNEP1-207ENST00000572043 IL9P15248 144 aa19.7■□□□□ 0.74
CTDNEP1-207ENST00000572043 ARF4P18085 180 aaPredicted RBP19.7■□□□□ 0.74
CTDNEP1-207ENST00000572043 PRPHP41219 470 aa19.7■□□□□ 0.74
CTDNEP1-207ENST00000572043 AFF1P51825 1210 aaKnown RBP19.7■□□□□ 0.74
CTDNEP1-207ENST00000572043 ATP2C1P98194 919 aaPredicted RBP19.7■□□□□ 0.74
CTDNEP1-207ENST00000572043 POU5F1BQ06416 359 aa19.7■□□□□ 0.74
CTDNEP1-207ENST00000572043 AMHR2Q16671 573 aa19.7■□□□□ 0.74
CTDNEP1-207ENST00000572043 SLC39A11Q8N1S5 342 aa19.7■□□□□ 0.74
CTDNEP1-207ENST00000572043 TCF25Q9BQ70 676 aa19.7■□□□□ 0.74
CTDNEP1-207ENST00000572043 ENTPD7Q9NQZ7 604 aa19.7■□□□□ 0.74
CTDNEP1-207ENST00000572043 PUF60Q9UHX1 559 aaKnown RBP19.7■□□□□ 0.74
CTDNEP1-207ENST00000572043 IPPQ9Y573 584 aa19.7■□□□□ 0.74
CTDNEP1-207ENST00000572043 ITGA4P13612 1032 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 MUTP22033 750 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 AXLP30530 894 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 CA8P35219 290 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 PPM1AP35813 382 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 LTBRP36941 435 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 ALDH7A1P49419 539 aaKnown RBP19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 NDUFV1P49821 464 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 PLCB3Q01970 1234 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 KRT17Q04695 432 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 MRPL10Q7Z7H8 261 aaKnown RBP19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 TMEM173Q86WV6 379 aaPredicted RBP19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 ZBTB8OSQ8IWT0 167 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 SMG8Q8ND04 991 aaKnown RBP19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 DEPTORQ8TB45 409 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 URGCPQ8TCY9 931 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 PLIN2Q99541 437 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 MMTAG2Q9BU76 263 aaKnown RBP19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 KIFC3Q9BVG8 833 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 NFKBIZQ9BYH8 718 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 TRIM6Q9C030 488 aaPredicted RBP19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 CSRNP2Q9H175 543 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 RNF39Q9H2S5 420 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 NRDE2Q9H7Z3 1164 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 TLE6Q9H808 572 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 USP20Q9Y2K6 914 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 STK24Q9Y6E0 443 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 KIAA1671Q9BY89 1806 aa19.69■□□□□ 0.74
CTDNEP1-207ENST00000572043 ARID2Q68CP9 1835 aa19.68■□□□□ 0.74
CTDNEP1-207ENST00000572043 NCK2O43639 380 aa19.68■□□□□ 0.74
CTDNEP1-207ENST00000572043 TBX10O75333 385 aa19.68■□□□□ 0.74
CTDNEP1-207ENST00000572043 NPTXRO95502 500 aa19.68■□□□□ 0.74
CTDNEP1-207ENST00000572043 POMCP01189 267 aa19.68■□□□□ 0.74
CTDNEP1-207ENST00000572043 NCLP19338 710 aaKnown RBP19.68■□□□□ 0.74
CTDNEP1-207ENST00000572043 COL19A1Q14993 1142 aa19.68■□□□□ 0.74
CTDNEP1-207ENST00000572043 PCBP1Q15365 356 aaKnown RBP eCLIP19.68■□□□□ 0.747e-11■■■■■ 49.4
CTDNEP1-207ENST00000572043 TMEM132AQ24JP5 1023 aa19.68■□□□□ 0.74
CTDNEP1-207ENST00000572043 CTC1Q2NKJ3 1217 aa19.68■□□□□ 0.74
CTDNEP1-207ENST00000572043 ZNF280BQ86YH2 543 aa19.68■□□□□ 0.74
CTDNEP1-207ENST00000572043 DNAJB4Q9UDY4 337 aa19.68■□□□□ 0.74
CTDNEP1-207ENST00000572043 DNM3Q9UQ16 869 aa19.68■□□□□ 0.74
CTDNEP1-207ENST00000572043 FNDC1Q4ZHG4 1894 aaPredicted RBP19.67■□□□□ 0.74
CTDNEP1-207ENST00000572043 FSCN2O14926 492 aa19.67■□□□□ 0.74
CTDNEP1-207ENST00000572043 B4GALT3O60512 393 aa19.67■□□□□ 0.74
CTDNEP1-207ENST00000572043 MLH1P40692 756 aa19.67■□□□□ 0.74
CTDNEP1-207ENST00000572043 RBM10P98175 930 aaKnown RBP19.67■□□□□ 0.74
CTDNEP1-207ENST00000572043 ADAM15Q13444 863 aa19.67■□□□□ 0.74
CTDNEP1-207ENST00000572043 TMC7Q7Z402 723 aa19.67■□□□□ 0.74
CTDNEP1-207ENST00000572043 KCNK18Q7Z418 384 aa19.67■□□□□ 0.74
CTDNEP1-207ENST00000572043 CCDC51Q96ER9 411 aa19.67■□□□□ 0.74
CTDNEP1-207ENST00000572043 TMEM169Q96HH4 297 aa19.67■□□□□ 0.74
CTDNEP1-207ENST00000572043 NXF3Q9H4D5 531 aaKnown RBP19.67■□□□□ 0.74
CTDNEP1-207ENST00000572043 PRMT7Q9NVM4 692 aaPredicted RBP19.67■□□□□ 0.74
CTDNEP1-207ENST00000572043 LZTS1Q9Y250 596 aa19.67■□□□□ 0.74
CTDNEP1-207ENST00000572043 GRXCR2A6NFK2 248 aa19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 TTLL13PA6NNM8 815 aa19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 HIDE1A8MVS5 230 aa19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 DDHD2O94830 711 aa19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 EYA4O95677 639 aa19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 SSBP05455 408 aaKnown RBP eCLIP19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 GALTP07902 379 aa19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 AKAP5P24588 427 aa19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 NAMPTP43490 491 aa19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 SLC11A1P49279 550 aa19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 CDCA2Q69YH5 1023 aaPredicted RBP19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 EFHBQ8N7U6 833 aa19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 CNNM3Q8NE01 707 aa19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 BCL7CQ8WUZ0 217 aaPredicted RBP19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 FAM193BQ96PV7 902 aaPredicted RBP19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 GAD1Q99259 594 aa19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 BARX2Q9UMQ3 279 aaPredicted RBP19.66■□□□□ 0.74
CTDNEP1-207ENST00000572043 PRKCBP05771 671 aa19.65■□□□□ 0.74
CTDNEP1-207ENST00000572043 LLGL2Q6P1M3 1020 aa19.65■□□□□ 0.74
CTDNEP1-207ENST00000572043 SLC27A1Q6PCB7 646 aa19.65■□□□□ 0.74
CTDNEP1-207ENST00000572043 IFT74Q96LB3 600 aa19.65■□□□□ 0.74
CTDNEP1-207ENST00000572043 ZFP42Q96MM3 310 aa19.65■□□□□ 0.74
CTDNEP1-207ENST00000572043 PNMA5Q96PV4 448 aa19.65■□□□□ 0.74
CTDNEP1-207ENST00000572043 RUSC1Q9BVN2 902 aa19.65■□□□□ 0.74
CTDNEP1-207ENST00000572043 C2orf40Q9H1Z8 148 aa19.65■□□□□ 0.74
CTDNEP1-207ENST00000572043 FZD8Q9H461 694 aa19.65■□□□□ 0.74
CTDNEP1-207ENST00000572043 KLK14Q9P0G3 267 aa19.65■□□□□ 0.74
CTDNEP1-207ENST00000572043 PARP2Q9UGN5 583 aa19.65■□□□□ 0.74
CTDNEP1-207ENST00000572043 CNTNAP2Q9UHC6 1331 aa19.65■□□□□ 0.74
CTDNEP1-207ENST00000572043 SPTBN5Q9NRC6 3674 aaKnown RBP19.64■□□□□ 0.74
CTDNEP1-207ENST00000572043 A0A1B0GUA9 196 aa19.64■□□□□ 0.73
CTDNEP1-207ENST00000572043 CCDC169A6NNP5 214 aa19.64■□□□□ 0.73
CTDNEP1-207ENST00000572043 K7ELQ4 463 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms