RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 AGPAT5Q9NUQ2 364 aa18.43■□□□□ 0.54
COMMD4-224ENST00000568877 B4GALT5O43286 388 aa18.42■□□□□ 0.54
COMMD4-224ENST00000568877 MGEA5O60502 916 aa18.42■□□□□ 0.54
COMMD4-224ENST00000568877 EFCAB14O75071 495 aa18.42■□□□□ 0.54
COMMD4-224ENST00000568877 BAIAP3O94812 1187 aa18.42■□□□□ 0.54
COMMD4-224ENST00000568877 ZSCAN20P17040 1043 aaPredicted RBP18.42■□□□□ 0.54
COMMD4-224ENST00000568877 AXLP30530 894 aa18.42■□□□□ 0.54
COMMD4-224ENST00000568877 HOXA11P31270 313 aaPredicted RBP18.42■□□□□ 0.54
COMMD4-224ENST00000568877 BMP8BP34820 402 aa18.42■□□□□ 0.54
COMMD4-224ENST00000568877 GTF2BQ00403 316 aa18.42■□□□□ 0.54
COMMD4-224ENST00000568877 STRN3Q13033 797 aa18.42■□□□□ 0.54
COMMD4-224ENST00000568877 PRPF4BQ13523 1007 aaKnown RBP18.42■□□□□ 0.54
COMMD4-224ENST00000568877 DSC3Q14574 896 aa18.42■□□□□ 0.54
COMMD4-224ENST00000568877 FAM26FQ5R3K3 315 aa18.42■□□□□ 0.54
COMMD4-224ENST00000568877 HERVK_113Q902F9 699 aa18.42■□□□□ 0.54
COMMD4-224ENST00000568877 STRA6Q9BX79 667 aa18.42■□□□□ 0.54
COMMD4-224ENST00000568877 EXOC1Q9NV70 894 aa18.42■□□□□ 0.54
COMMD4-224ENST00000568877 TBX20Q9UMR3 447 aa18.42■□□□□ 0.54
COMMD4-224ENST00000568877 PIN4Q9Y237 131 aaKnown RBP18.42■□□□□ 0.54
COMMD4-224ENST00000568877 CNTNAP2Q9UHC6 1331 aa18.42■□□□□ 0.54
COMMD4-224ENST00000568877 ENPP3O14638 875 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 PPP1R37O75864 691 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 SMC2O95347 1197 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 GCNT3O95395 438 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 EDN1P05305 212 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 ARF4P18085 180 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-224ENST00000568877 CASP5P51878 434 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 PSMD2Q13200 908 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 KCNB1Q14721 858 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 CAMK4Q16566 473 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 ZC2HC1CQ53FD0 456 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-224ENST00000568877 NT5DC1Q5TFE4 455 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 RTN4RL1Q86UN2 441 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-224ENST00000568877 SPATA20Q8TB22 786 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 LINC01599Q8WXQ3 324 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 ERCC4Q92889 916 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-224ENST00000568877 SMARCE1Q969G3 411 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 CPB2Q96IY4 423 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 ADAM2Q99965 735 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 MRPL4Q9BYD3 311 aaKnown RBP18.41■□□□□ 0.54
COMMD4-224ENST00000568877 FGFBP2Q9BYJ0 223 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 TSPYL2Q9H2G4 693 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-224ENST00000568877 CLSTN2Q9H4D0 955 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 PCDHB13Q9Y5F0 798 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 PCDHA5Q9Y5H7 936 aa18.41■□□□□ 0.54
COMMD4-224ENST00000568877 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-224ENST00000568877 TTLL13PA6NNM8 815 aa18.4■□□□□ 0.54
COMMD4-224ENST00000568877 RHOBTB3O94955 611 aa18.4■□□□□ 0.54
COMMD4-224ENST00000568877 MYBP10242 640 aa18.4■□□□□ 0.54
COMMD4-224ENST00000568877 ALCAMQ13740 583 aa18.4■□□□□ 0.54
COMMD4-224ENST00000568877 SHHQ15465 462 aa18.4■□□□□ 0.54
COMMD4-224ENST00000568877 C9orf50Q5SZB4 431 aa18.4■□□□□ 0.54
COMMD4-224ENST00000568877 NOTUMQ6P988 496 aa18.4■□□□□ 0.54
COMMD4-224ENST00000568877 STXBP4Q6ZWJ1 553 aa18.4■□□□□ 0.54
COMMD4-224ENST00000568877 HVCN1Q96D96 273 aa18.4■□□□□ 0.54
COMMD4-224ENST00000568877 GSDMAQ96QA5 445 aa18.4■□□□□ 0.54
COMMD4-224ENST00000568877 MTIF3Q9H2K0 278 aaKnown RBP18.4■□□□□ 0.54
COMMD4-224ENST00000568877 SLC39A2Q9NP94 309 aa18.4■□□□□ 0.54
COMMD4-224ENST00000568877 RGS18Q9NS28 235 aa18.4■□□□□ 0.54
COMMD4-224ENST00000568877 RMND1Q9NWS8 449 aa18.4■□□□□ 0.54
COMMD4-224ENST00000568877 USP20Q9Y2K6 914 aa18.4■□□□□ 0.54
COMMD4-224ENST00000568877 MYH11P35749 1972 aa18.39■□□□□ 0.53
COMMD4-224ENST00000568877 A0A1B0GUA9 196 aa18.39■□□□□ 0.53
COMMD4-224ENST00000568877 ZBBXA8MT70 800 aa18.39■□□□□ 0.53
COMMD4-224ENST00000568877 PTMSP20962 102 aa18.39■□□□□ 0.53
COMMD4-224ENST00000568877 SARSP49591 514 aaKnown RBP18.39■□□□□ 0.53
COMMD4-224ENST00000568877 TMEM132AQ24JP5 1023 aa18.39■□□□□ 0.53
COMMD4-224ENST00000568877 L1TD1Q5T7N2 865 aaKnown RBP18.39■□□□□ 0.53
COMMD4-224ENST00000568877 ATF7IP2Q5U623 682 aa18.39■□□□□ 0.53
COMMD4-224ENST00000568877 TWF2Q6IBS0 349 aaKnown RBP18.39■□□□□ 0.53
COMMD4-224ENST00000568877 CHRDL2Q6WN34 429 aa18.39■□□□□ 0.53
COMMD4-224ENST00000568877 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.39■□□□□ 0.53
COMMD4-224ENST00000568877 MAP4K3Q8IVH8 894 aa18.39■□□□□ 0.53
COMMD4-224ENST00000568877 GLIS3Q8NEA6 775 aa18.39■□□□□ 0.53
COMMD4-224ENST00000568877 TET1Q8NFU7 2136 aa18.39■□□□□ 0.53
COMMD4-224ENST00000568877 CCDC51Q96ER9 411 aa18.39■□□□□ 0.53
COMMD4-224ENST00000568877 ACO2Q99798 780 aaKnown RBP18.39■□□□□ 0.53
COMMD4-224ENST00000568877 TARS2Q9BW92 718 aaKnown RBP18.39■□□□□ 0.53
COMMD4-224ENST00000568877 NUP62CLQ9H1M0 184 aa18.39■□□□□ 0.53
COMMD4-224ENST00000568877 C1orf112Q9NSG2 853 aa18.39■□□□□ 0.53
COMMD4-224ENST00000568877 CXXC1Q9P0U4 656 aaPredicted RBP18.39■□□□□ 0.53
COMMD4-224ENST00000568877 N4BP3O15049 544 aa18.38■□□□□ 0.53
COMMD4-224ENST00000568877 KCNJ6P48051 423 aa18.38■□□□□ 0.53
COMMD4-224ENST00000568877 WDR5P61964 334 aaKnown RBP18.38■□□□□ 0.53
COMMD4-224ENST00000568877 STK4Q13043 487 aa18.38■□□□□ 0.53
COMMD4-224ENST00000568877 RASIP1Q5U651 963 aa18.38■□□□□ 0.53
COMMD4-224ENST00000568877 ZPBP2Q6X784 338 aa18.38■□□□□ 0.53
COMMD4-224ENST00000568877 SLC24A5Q71RS6 500 aa18.38■□□□□ 0.53
COMMD4-224ENST00000568877 EPM2AIP1Q7L775 607 aaPredicted RBP18.38■□□□□ 0.53
COMMD4-224ENST00000568877 ACCSQ96QU6 501 aa18.38■□□□□ 0.53
COMMD4-224ENST00000568877 TRAIPQ9BWF2 469 aa18.38■□□□□ 0.53
COMMD4-224ENST00000568877 PRO3102Q9H379 93 aa18.38■□□□□ 0.53
COMMD4-224ENST00000568877 PDZD7Q9H5P4 517 aa18.38■□□□□ 0.53
COMMD4-224ENST00000568877 TNFSF13BQ9Y275 285 aa18.38■□□□□ 0.53
COMMD4-224ENST00000568877 C9IYK1 514 aa18.37■□□□□ 0.53
COMMD4-224ENST00000568877 EIF3DO15371 548 aaKnown RBP eCLIP18.37■□□□□ 0.53
COMMD4-224ENST00000568877 PRPF6O94906 941 aaKnown RBP18.37■□□□□ 0.53
COMMD4-224ENST00000568877 PIGRP01833 764 aa18.37■□□□□ 0.53
COMMD4-224ENST00000568877 AMHP03971 560 aa18.37■□□□□ 0.53
COMMD4-224ENST00000568877 KCNA1Q09470 495 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms