RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, human

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KARS-204	ENST00000564578	PCDHA5	Q9Y5H7	936 aa		13.74	□□□□□ -0.21
KARS-204	ENST00000564578	ACKR2	O00590	384 aa		13.73	□□□□□ -0.21
KARS-204	ENST00000564578	ARF4	P18085	180 aa	Predicted RBP	13.73	□□□□□ -0.21
KARS-204	ENST00000564578	SARS	P49591	514 aa	Known RBP	13.73	□□□□□ -0.21
KARS-204	ENST00000564578	GTF2B	Q00403	316 aa		13.73	□□□□□ -0.21
KARS-204	ENST00000564578	KCNA1	Q09470	495 aa		13.73	□□□□□ -0.21
KARS-204	ENST00000564578	DSC3	Q14574	896 aa		13.73	□□□□□ -0.21
KARS-204	ENST00000564578	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
KARS-204	ENST00000564578	CAMK4	Q16566	473 aa		13.73	□□□□□ -0.21
KARS-204	ENST00000564578	MAPK6	Q16659	721 aa		13.73	□□□□□ -0.21
KARS-204	ENST00000564578	C9orf50	Q5SZB4	431 aa		13.73	□□□□□ -0.21
KARS-204	ENST00000564578	PPP4R3CP	Q6ZMV5	832 aa		13.73	□□□□□ -0.21
KARS-204	ENST00000564578	CATSPER4	Q7RTX7	472 aa		13.73	□□□□□ -0.21
KARS-204	ENST00000564578	ZBTB8OS	Q8IWT0	167 aa		13.73	□□□□□ -0.21
KARS-204	ENST00000564578	PRO3102	Q9H379	93 aa		13.73	□□□□□ -0.21
KARS-204	ENST00000564578	MRPL44	Q9H9J2	332 aa	Known RBP	13.73	□□□□□ -0.21
KARS-204	ENST00000564578	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.73	□□□□□ -0.21
KARS-204	ENST00000564578	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.72	□□□□□ -0.21
KARS-204	ENST00000564578		K7ENM7	598 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	RHOBTB3	O94955	611 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	FGB	P02675	491 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	MYB	P10242	640 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	STK4	Q13043	487 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	APBB2	Q92870	758 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	CCDC34	Q96HJ3	373 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	PRIMPOL	Q96LW4	560 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	IKZF4	Q9H2S9	585 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.72	□□□□□ -0.21
KARS-204	ENST00000564578	TBX20	Q9UMR3	447 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	PHLPP2	Q6ZVD8	1323 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578		A0A1B0GUA9	196 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	ENPP3	O14638	875 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	PRKCB	P05771	671 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	HOXD13	P35453	343 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	IKBKE	Q14164	716 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	SHH	Q15465	462 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	FAM26F	Q5R3K3	315 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	NT5DC1	Q5TFE4	455 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	RASIP1	Q5U651	963 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.72	□□□□□ -0.21
KARS-204	ENST00000564578	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.72	□□□□□ -0.21
KARS-204	ENST00000564578	KIAA0895	Q8NCT3	520 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	CPB2	Q96IY4	423 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	ADAM2	Q99965	735 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.72	□□□□□ -0.21
KARS-204	ENST00000564578	SLC39A2	Q9NP94	309 aa		13.72	□□□□□ -0.21
KARS-204	ENST00000564578	PIN4	Q9Y237	131 aa	Known RBP	13.72	□□□□□ -0.21
KARS-204	ENST00000564578	CDH23	Q9H251	3354 aa		13.71	□□□□□ -0.21
KARS-204	ENST00000564578	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.71	□□□□□ -0.21
KARS-204	ENST00000564578	ERLIN2	O94905	339 aa		13.71	□□□□□ -0.21
KARS-204	ENST00000564578	BMP8B	P34820	402 aa		13.71	□□□□□ -0.21
KARS-204	ENST00000564578	KCNB1	Q14721	858 aa		13.71	□□□□□ -0.21
KARS-204	ENST00000564578	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.71	□□□□□ -0.21	1e-8	■□□□□ 11.3
KARS-204	ENST00000564578	CDR2L	Q86X02	465 aa	Predicted RBP	13.71	□□□□□ -0.21
KARS-204	ENST00000564578	CRIPAK	Q8N1N5	446 aa		13.71	□□□□□ -0.21
KARS-204	ENST00000564578	HERVK_113	Q902F9	699 aa		13.71	□□□□□ -0.21
KARS-204	ENST00000564578	GSDMA	Q96QA5	445 aa		13.71	□□□□□ -0.21
KARS-204	ENST00000564578	TARS2	Q9BW92	718 aa	Known RBP	13.71	□□□□□ -0.21
KARS-204	ENST00000564578	FTHL17	Q9BXU8	183 aa		13.71	□□□□□ -0.21
KARS-204	ENST00000564578	UBE2O	Q9C0C9	1292 aa	Known RBP	13.71	□□□□□ -0.21
KARS-204	ENST00000564578	CLSTN2	Q9H4D0	955 aa		13.71	□□□□□ -0.21
KARS-204	ENST00000564578	CHST12	Q9NRB3	414 aa		13.71	□□□□□ -0.21
KARS-204	ENST00000564578	RGS18	Q9NS28	235 aa		13.71	□□□□□ -0.21
KARS-204	ENST00000564578	CNTNAP2	Q9UHC6	1331 aa		13.71	□□□□□ -0.21
KARS-204	ENST00000564578		H0YCG3	227 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	GCNT3	O95395	438 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	PRPF4B	Q13523	1007 aa	Known RBP	13.7	□□□□□ -0.22
KARS-204	ENST00000564578	UBXN11	Q5T124	520 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	MAP4K3	Q8IVH8	894 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	SLC17A8	Q8NDX2	589 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	SCFD1	Q8WVM8	642 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	ACO2	Q99798	780 aa	Known RBP	13.7	□□□□□ -0.22
KARS-204	ENST00000564578	TRAIP	Q9BWF2	469 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	PTPRH	Q9HD43	1115 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	EXOC1	Q9NV70	894 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	HOOK1	Q9UJC3	728 aa	Known RBP	13.7	□□□□□ -0.22
KARS-204	ENST00000564578		C9IYK1	514 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	ABLIM1	O14639	778 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	BAIAP3	O94812	1187 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	MBD3	O95983	291 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	BMP6	P22004	513 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	SCP2	P22307	547 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	AXL	P30530	894 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	WDR5	P61964	334 aa	Known RBP	13.7	□□□□□ -0.22
KARS-204	ENST00000564578	DEFB103A	P81534	67 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	PSMD2	Q13200	908 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	EEF1DP3	Q658K8	133 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	SLC39A4	Q6P5W5	647 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	ZNF507	Q8TCN5	953 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	KIAA1468	Q9P260	1216 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	GDA	Q9Y2T3	454 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	PCDHB13	Q9Y5F0	798 aa		13.7	□□□□□ -0.22
KARS-204	ENST00000564578	TRIOBP	Q9H2D6	2365 aa		13.69	□□□□□ -0.22
KARS-204	ENST00000564578	MICAL3	Q7RTP6	2002 aa		13.69	□□□□□ -0.22
KARS-204	ENST00000564578		A0A0U1RQF3	1178 aa		13.69	□□□□□ -0.22
KARS-204	ENST00000564578	PRPF6	O94906	941 aa	Known RBP	13.69	□□□□□ -0.22
KARS-204	ENST00000564578	PIGR	P01833	764 aa		13.69	□□□□□ -0.22
KARS-204	ENST00000564578	ACTN1	P12814	892 aa		13.69	□□□□□ -0.22
KARS-204	ENST00000564578	ZSCAN20	P17040	1043 aa	Predicted RBP	13.69	□□□□□ -0.22
KARS-204	ENST00000564578	PROZ	P22891	400 aa		13.69	□□□□□ -0.22

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