RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 KCNG1Q9UIX4 513 aa8.25□□□□□ -1.09
SMG1-204ENST00000561940 ARHGAP6O43182 974 aa8.24□□□□□ -1.09
SMG1-204ENST00000561940 PCDH8O95206 1070 aa8.24□□□□□ -1.09
SMG1-204ENST00000561940 CCT2P78371 535 aaKnown RBP8.24□□□□□ -1.09
SMG1-204ENST00000561940 DGKDQ16760 1214 aa8.24□□□□□ -1.09
SMG1-204ENST00000561940 ZNF827Q17R98 1081 aa8.24□□□□□ -1.09
SMG1-204ENST00000561940 RPGRQ92834 1020 aaKnown RBP8.24□□□□□ -1.09
SMG1-204ENST00000561940 HSPBAP1Q96EW2 488 aa8.24□□□□□ -1.09
SMG1-204ENST00000561940 OR10A2Q9H208 303 aa8.24□□□□□ -1.09
SMG1-204ENST00000561940 ZNF277Q9NRM2 450 aaPredicted RBP8.24□□□□□ -1.09
SMG1-204ENST00000561940 SLC52A1Q9NWF4 448 aa8.24□□□□□ -1.09
SMG1-204ENST00000561940 DPP7Q9UHL4 492 aa8.24□□□□□ -1.09
SMG1-204ENST00000561940 DNAI1Q9UI46 699 aa8.24□□□□□ -1.09
SMG1-204ENST00000561940 DENND2AQ9ULE3 1009 aa8.24□□□□□ -1.09
SMG1-204ENST00000561940 GIT1Q9Y2X7 761 aa8.24□□□□□ -1.09
SMG1-204ENST00000561940 GPR45Q9Y5Y3 372 aa8.24□□□□□ -1.09
SMG1-204ENST00000561940 ST20-MTHFSA0A0A6YYL1 179 aa8.23□□□□□ -1.09
SMG1-204ENST00000561940 MATN2O00339 956 aa8.23□□□□□ -1.09
SMG1-204ENST00000561940 CDC14BO60729 498 aa8.23□□□□□ -1.09
SMG1-204ENST00000561940 IL33O95760 270 aa8.23□□□□□ -1.09
SMG1-204ENST00000561940 TCTN3Q6NUS6 607 aa8.23□□□□□ -1.09
SMG1-204ENST00000561940 TSPEARQ8WU66 669 aa8.23□□□□□ -1.09
SMG1-204ENST00000561940 LRGUKQ96M69 825 aa8.23□□□□□ -1.09
SMG1-204ENST00000561940 MTG2Q9H4K7 406 aa8.23□□□□□ -1.09
SMG1-204ENST00000561940 KCMF1Q9P0J7 381 aa8.23□□□□□ -1.09
SMG1-204ENST00000561940 PUF60Q9UHX1 559 aaKnown RBP8.23□□□□□ -1.09
SMG1-204ENST00000561940 TUBD1Q9UJT1 453 aa8.23□□□□□ -1.09
SMG1-204ENST00000561940 ANKRD6Q9Y2G4 727 aa8.23□□□□□ -1.09
SMG1-204ENST00000561940 FOXS1O43638 330 aa8.22□□□□□ -1.09
SMG1-204ENST00000561940 PRC1O43663 620 aa8.22□□□□□ -1.09
SMG1-204ENST00000561940 CR2P20023 1033 aa8.22□□□□□ -1.09
SMG1-204ENST00000561940 MAGEA10P43363 369 aaPredicted RBP8.22□□□□□ -1.09
SMG1-204ENST00000561940 MRPS9P82933 396 aaKnown RBP8.22□□□□□ -1.09
SMG1-204ENST00000561940 ATP2C1P98194 919 aaPredicted RBP8.22□□□□□ -1.09
SMG1-204ENST00000561940 EFEMP1Q12805 493 aa8.22□□□□□ -1.09
SMG1-204ENST00000561940 SPATS1Q496A3 300 aa8.22□□□□□ -1.09
SMG1-204ENST00000561940 ZNF585AQ6P3V2 769 aa8.22□□□□□ -1.09
SMG1-204ENST00000561940 SLC41A1Q8IVJ1 513 aa8.22□□□□□ -1.09
SMG1-204ENST00000561940 DYDC2Q96IM9 177 aa8.22□□□□□ -1.09
SMG1-204ENST00000561940 SAMD11Q96NU1 681 aa8.22□□□□□ -1.09
SMG1-204ENST00000561940 ANLNQ9NQW6 1124 aa8.22□□□□□ -1.09
SMG1-204ENST00000561940 OAZ3Q9UMX2 235 aa8.22□□□□□ -1.09
SMG1-204ENST00000561940 RBM8AQ9Y5S9 174 aaKnown RBP8.22□□□□□ -1.09
SMG1-204ENST00000561940 NUMBLQ9Y6R0 609 aa8.22□□□□□ -1.09
SMG1-204ENST00000561940 MYPNQ86TC9 1320 aa8.22□□□□□ -1.09
SMG1-204ENST00000561940 GNALP38405 381 aa8.21□□□□□ -1.1
SMG1-204ENST00000561940 BCAR1P56945 870 aa8.21□□□□□ -1.1
SMG1-204ENST00000561940 CDK17Q00537 523 aa8.21□□□□□ -1.1
SMG1-204ENST00000561940 MUM1Q2TAK8 710 aa8.21□□□□□ -1.1
SMG1-204ENST00000561940 KLHDC10Q6PID8 442 aa8.21□□□□□ -1.1
SMG1-204ENST00000561940 PPM1NQ8N819 430 aa8.21□□□□□ -1.1
SMG1-204ENST00000561940 AUTS2Q8WXX7 1259 aa8.21□□□□□ -1.1
SMG1-204ENST00000561940 CFHR4Q92496 578 aa8.21□□□□□ -1.1
SMG1-204ENST00000561940 OR14A2Q96R54 314 aa8.21□□□□□ -1.1
SMG1-204ENST00000561940 DEF6Q9H4E7 631 aa8.21□□□□□ -1.1
SMG1-204ENST00000561940 PRSS50Q9UI38 385 aa8.21□□□□□ -1.1
SMG1-204ENST00000561940 SERPINB13Q9UIV8 391 aa8.21□□□□□ -1.1
SMG1-204ENST00000561940 PNMA8BQ9ULN7 279 aaPredicted RBP8.21□□□□□ -1.1
SMG1-204ENST00000561940 USP18Q9UMW8 372 aa8.21□□□□□ -1.1
SMG1-204ENST00000561940 ZFR2Q9UPR6 939 aaKnown RBP8.21□□□□□ -1.1
SMG1-204ENST00000561940 C2orf78A6NCI8 922 aa8.2□□□□□ -1.1
SMG1-204ENST00000561940 OPHN1O60890 802 aa8.2□□□□□ -1.1
SMG1-204ENST00000561940 NDUFS2O75306 463 aa8.2□□□□□ -1.1
SMG1-204ENST00000561940 HNRNPLP14866 589 aaKnown RBP eCLIP8.2□□□□□ -1.1
SMG1-204ENST00000561940 PPARAQ07869 468 aa8.2□□□□□ -1.1
SMG1-204ENST00000561940 NFYCQ13952 458 aa8.2□□□□□ -1.1
SMG1-204ENST00000561940 EPM2AIP1Q7L775 607 aaPredicted RBP8.2□□□□□ -1.1
SMG1-204ENST00000561940 CCDC146Q8IYE0 955 aa8.2□□□□□ -1.1
SMG1-204ENST00000561940 RPL10LQ96L21 214 aaKnown RBP8.2□□□□□ -1.1
SMG1-204ENST00000561940 NOL10Q9BSC4 688 aaKnown RBP8.2□□□□□ -1.1
SMG1-204ENST00000561940 PITHD1Q9GZP4 211 aaPredicted RBP8.2□□□□□ -1.1
SMG1-204ENST00000561940 CNOT11Q9UKZ1 510 aaKnown RBP8.2□□□□□ -1.1
SMG1-204ENST00000561940 CCDC194A0A1B0GVG4 234 aa8.19□□□□□ -1.1
SMG1-204ENST00000561940 VSTM5A8MXK1 200 aa8.19□□□□□ -1.1
SMG1-204ENST00000561940 ZNF623O75123 536 aa8.19□□□□□ -1.1
SMG1-204ENST00000561940 MAFO75444 373 aaPredicted RBP8.19□□□□□ -1.1
SMG1-204ENST00000561940 MAP4K4O95819 1239 aaPredicted RBP8.19□□□□□ -1.1
SMG1-204ENST00000561940 LPOP22079 712 aaPredicted RBP8.19□□□□□ -1.1
SMG1-204ENST00000561940 ADAM17P78536 824 aa8.19□□□□□ -1.1
SMG1-204ENST00000561940 CXorf57Q6NSI4 855 aaKnown RBP8.19□□□□□ -1.1
SMG1-204ENST00000561940 FUKQ8N0W3 1084 aa8.19□□□□□ -1.1
SMG1-204ENST00000561940 Q8TCH9 128 aa8.19□□□□□ -1.1
SMG1-204ENST00000561940 CLIP3Q96DZ5 547 aa8.19□□□□□ -1.1
SMG1-204ENST00000561940 RAX2Q96IS3 184 aa8.19□□□□□ -1.1
SMG1-204ENST00000561940 CCDC136Q96JN2 1154 aa8.19□□□□□ -1.1
SMG1-204ENST00000561940 WDR92Q96MX6 357 aa8.19□□□□□ -1.1
SMG1-204ENST00000561940 WNT8AQ9H1J5 351 aa8.19□□□□□ -1.1
SMG1-204ENST00000561940 IFT122Q9HBG6 1241 aa8.19□□□□□ -1.1
SMG1-204ENST00000561940 POLR3BQ9NW08 1133 aaPredicted RBP8.19□□□□□ -1.1
SMG1-204ENST00000561940 EVLQ9UI08 416 aaPredicted RBP8.19□□□□□ -1.1
SMG1-204ENST00000561940 CTDP1Q9Y5B0 961 aaPredicted RBP8.19□□□□□ -1.1
SMG1-204ENST00000561940 CDY2AQ9Y6F7 541 aa8.19□□□□□ -1.1
SMG1-204ENST00000561940 A0A0A6YYJ9 748 aa8.18□□□□□ -1.1
SMG1-204ENST00000561940 FXR1P51114 621 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMG1-204ENST00000561940 HGFACQ04756 655 aa8.18□□□□□ -1.1
SMG1-204ENST00000561940 MBNL2Q5VZF2 373 aaKnown RBP8.18□□□□□ -1.1
SMG1-204ENST00000561940 GAREM2Q75VX8 874 aa8.18□□□□□ -1.1
SMG1-204ENST00000561940 BMP8AQ7Z5Y6 402 aa8.18□□□□□ -1.1
SMG1-204ENST00000561940 CATIPQ7Z7H3 387 aa8.18□□□□□ -1.1
SMG1-204ENST00000561940 PALM2Q8IXS6 379 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms