RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 PNMA6FA0A0J9YX94 578 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 TAF1BQ53T94 588 aaPredicted RBP10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 RUBCNQ92622 972 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 ZBTB10Q96DT7 871 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 ATG3Q9NT62 314 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 ADAMTS12P58397 1594 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 DHX34Q14147 1143 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 ENAHQ8N8S7 591 aaPredicted RBP10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 ZBTB1Q9Y2K1 713 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 USP17L5A8MUK1 530 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 XPAP23025 273 aaPredicted RBP10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 KIAA1755Q5JYT7 1200 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 RARS2Q5T160 578 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 SYDE2Q5VT97 1194 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 FAM160B1Q5W0V3 765 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 CYB5D1Q6P9G0 228 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 C4orf33Q8N1A6 199 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 FUT8Q9BYC5 575 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 ZNF335Q9H4Z2 1342 aaPredicted RBP10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 FAM205CA6NFA0 338 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 SPDYE2BA6NHP3 402 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 CCT8L1PA6NM43 557 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 SPDYE6P0CI01 402 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 TBC1D9BQ66K14 1250 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 TEX9Q8N6V9 391 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 GIPC2Q8TF65 315 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 RHBDL2Q9NX52 303 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 PCSK1NQ9UHG2 260 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 CPSF1Q10570 1443 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 MROH7-TTC4A0A0A0MT08 1334 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 STAT3P40763 770 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 CDK8P49336 464 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 ATXN3P54252 364 aaPredicted RBP10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 KLC3Q6P597 504 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 TTLL6Q8N841 843 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 SNRNP27Q8WVK2 155 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 KLHL11Q9NVR0 708 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 STX18Q9P2W9 335 aaKnown RBP10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 AKT3Q9Y243 479 aa10.85□□□□□ -0.67
GTF3C1-202ENST00000561623 CNGA3Q16281 694 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 TMEM270Q6UE05 265 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 CATSPER3Q86XQ3 398 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 KIAA2013Q8IYS2 634 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 MSTO1Q9BUK6 570 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 SNX25Q9H3E2 840 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 TRIM33Q9UPN9 1127 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 PVALEFA0A1B0GWK0 134 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 SNAP23O00161 211 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 TRIM49P0CI25 452 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 TRIM49CP0CI26 452 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 BTKQ06187 659 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 MORF4L2Q15014 288 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 KNOP1Q1ED39 458 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 RPS6KC1Q96S38 1066 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 ADD3Q9UEY8 706 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 C21orf2O43822 256 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 ZFXP17010 805 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 MED21Q13503 144 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 TFDP1Q14186 410 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 USPL1Q5W0Q7 1092 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 RFFLQ8WZ73 363 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 SLC7A5P2Q9GIP4 190 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 ALDH8A1Q9H2A2 487 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 MOSPD1Q9UJG1 213 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 ZNF229Q9UJW7 825 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 POTEFA5A3E0 1075 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 KPNA7A9QM74 516 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 H3BQF6 201 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 FAM107AO95990 144 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 POTEIP0CG38 1075 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 PMS1P54277 932 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 POTEGQ6S5H5 508 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 POTEEQ6S8J3 1075 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 REXO1L1PQ8IX06 675 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 YAF2Q8IY57 180 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 AGGF1Q8N302 714 aaeCLIP10.84□□□□□ -0.676e-10■□□□□ 9
GTF3C1-202ENST00000561623 RBM46Q8TBY0 533 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 KIFC3Q9BVG8 833 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 CELF4Q9BZC1 486 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 WNT8AQ9H1J5 351 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 MARCOQ9UEW3 520 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 UGGT1Q9NYU2 1555 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 PITPNM2Q9BZ72 1349 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 GOLGA8CPA6NN73 597 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 GYPCP04921 128 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 IGKV5-2P06315 115 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 BMP3P12645 472 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 SERPINB3P29508 390 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 LRRC8EQ6NSJ5 796 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 NLRP10Q86W26 655 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 DTNBP1Q96EV8 351 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 DDX28Q9NUL7 540 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 PRDM15P57071 1507 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 NPHP3-ACAD11A0A0J9YXS1 232 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 ZNF233A6NK53 670 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 CCDC22O60826 627 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 TAC1P20366 129 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 ARSEP51690 589 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 ARHGDIAP52565 204 aa10.84□□□□□ -0.67
GTF3C1-202ENST00000561623 NSUN2Q08J23 767 aaKnown RBP eCLIP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms