RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 C1orf220Q5T0J3 134 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 KLHDC7AQ5VTJ3 777 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 GBP6Q6ZN66 633 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 ABRAQ8N0Z2 381 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 ATP8B4Q8TF62 1192 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 CCDC42Q96M95 316 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 NLRP4Q96MN2 994 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 ARHGAP39Q9C0H5 1083 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 SIX2Q9NPC8 291 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 CEP72Q9P209 647 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 GUCA1BQ9UMX6 200 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 GH1P01241 217 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 DLATP10515 647 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 KRT13P13646 458 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 INSRRP14616 1297 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 LIG4P49917 911 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 WNT7BP56706 349 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 EFCAB12Q6NXP0 572 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 C17orf99Q6UX52 265 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 PLPPR4Q7Z2D5 763 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 SLC9A9Q8IVB4 645 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 RNF149Q8NC42 400 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 MKNK1Q9BUB5 465 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 DEF6Q9H4E7 631 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 SMARCAD1Q9H4L7 1026 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 C17orf75Q9HAS0 396 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 VTA1Q9NP79 307 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 EXOC7Q9UPT5 735 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 DYNC1LI2O43237 492 aaPredicted RBP11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 ETF1P62495 437 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 MAP2K1Q02750 393 aaPredicted RBP11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 LAMC2Q13753 1193 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 ARHGAP29Q52LW3 1261 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 SFMBT2Q5VUG0 894 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 HGSNATQ68CP4 663 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 KIF18AQ8NI77 898 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 SPAG5Q96R06 1193 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 LACRTQ9GZZ8 138 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 TLL2Q9Y6L7 1015 aa11.85□□□□□ -0.51
SNRPA1-211ENST00000560433 ADGRA2Q96PE1 1338 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 KIF3CO14782 793 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 CCP110O43303 1012 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 NAMPTP43490 491 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 MYL7Q01449 175 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 LAMTOR4Q0VGL1 99 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 STRN3Q13033 797 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 MAP2K5Q13163 448 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 NAA30Q147X3 362 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 ARHGAP44Q17R89 818 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 MORN1Q5T089 497 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 IQCEQ6IPM2 695 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 ZBTB33Q86T24 672 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 OR6J1Q8NGC5 347 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 ABHD16BQ9H3Z7 469 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 ERAP1Q9NZ08 941 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 SLC15A5A6NIM6 579 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 AKR1B10O60218 316 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 AOC2O75106 756 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 RFC5P40937 340 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 ARHGAP25P42331 645 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 KIF11P52732 1056 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 RTP1P59025 263 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 NLRP11P59045 1033 aaKnown RBP11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 ZNF569Q5MCW4 686 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 INTS8Q75QN2 995 aaKnown RBP11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 C16orf70Q9BSU1 422 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 SUCLA2Q9P2R7 463 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 PAXBP1Q9Y5B6 917 aa11.84□□□□□ -0.51
SNRPA1-211ENST00000560433 ZSWIM8A7E2V4 1837 aa11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 LRRIQ3A6PVS8 624 aaPredicted RBP11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 H3BRB1 525 aa11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 TNPO2O14787 897 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 TFRCP02786 760 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 KLRC1P26715 233 aa11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 TNFAIP2Q03169 654 aa11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 OLFML2BQ68BL8 750 aa11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 SCARA3Q6AZY7 606 aa11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 PHLDB3Q6NSJ2 640 aa11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 HOMEZQ8IX15 550 aa11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 PPTC7Q8NI37 304 aa11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 KAT5Q92993 513 aa11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 FAM167AQ96KS9 214 aa11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 TMEM117Q9H0C3 514 aa11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 HAUS4Q9H6D7 363 aa11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 TUT1Q9H6E5 874 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 V9GYY5 206 aaPredicted RBP11.83□□□□□ -0.52
SNRPA1-211ENST00000560433 MACROD2A1Z1Q3 448 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 URI1O94763 535 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 GFPT2O94808 682 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 VTNP04004 478 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 HNRNPH3P31942 346 aaKnown RBP11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 CYLC1P35663 651 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 BEX3Q00994 111 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 PPP2R3AQ06190 1150 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 PPP2R5AQ15172 486 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 DUSP28Q4G0W2 176 aa11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 BRDTQ58F21 947 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-211ENST00000560433 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms