RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 GUF1Q8N442 669 aaKnown RBP11.21□□□□□ -0.61
SYNE2-215ENST00000554997 TMEM199Q8N511 208 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 MLKLQ8NB16 471 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 KIAA0895Q8NCT3 520 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 GLIS3Q8NEA6 775 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 SCFD1Q8WVM8 642 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 ACCSQ96QU6 501 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 FGFBP2Q9BYJ0 223 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 OSBPL7Q9BZF2 842 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 PPP1R12CQ9BZL4 782 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 WNT8AQ9H1J5 351 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 AGO3Q9H9G7 860 aaKnown RBP11.21□□□□□ -0.61
SYNE2-215ENST00000554997 PADI3Q9ULW8 664 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 ST3GAL5Q9UNP4 418 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 EXOC7Q9UPT5 735 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 GDAQ9Y2T3 454 aa11.21□□□□□ -0.61
SYNE2-215ENST00000554997 LOXHD1Q8IVV2 1947 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 A0A1B0GUA9 196 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 PPP1R3GB7ZBB8 358 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 PRPF6O94906 941 aaKnown RBP11.2□□□□□ -0.62
SYNE2-215ENST00000554997 PRKCBP05771 671 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 GHRP10912 638 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 HOXA11P31270 313 aaPredicted RBP11.2□□□□□ -0.62
SYNE2-215ENST00000554997 HOXD13P35453 343 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 PRCPP42785 496 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 NLRP12P59046 1061 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 SNRPFP62306 86 aaKnown RBP11.2□□□□□ -0.62
SYNE2-215ENST00000554997 KCNA1Q09470 495 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 PRPF4BQ13523 1007 aaKnown RBP11.2□□□□□ -0.62
SYNE2-215ENST00000554997 KNOP1Q1ED39 458 aaKnown RBP11.2□□□□□ -0.62
SYNE2-215ENST00000554997 CT47A1Q5JQC4 288 aaPredicted RBP11.2□□□□□ -0.62
SYNE2-215ENST00000554997 ZPBP2Q6X784 338 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 CATSPER4Q7RTX7 472 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 MAP4K3Q8IVH8 894 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 RPUSD2Q8IZ73 545 aaKnown RBP11.2□□□□□ -0.62
SYNE2-215ENST00000554997 ADSSL1Q8N142 457 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 DHTKD1Q96HY7 919 aaPredicted RBP11.2□□□□□ -0.62
SYNE2-215ENST00000554997 SCLYQ96I15 445 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 ACO2Q99798 780 aaKnown RBP11.2□□□□□ -0.62
SYNE2-215ENST00000554997 MRPL4Q9BYD3 311 aaKnown RBP11.2□□□□□ -0.62
SYNE2-215ENST00000554997 ERVK-5Q9HDB9 667 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 MAPK8IP1Q9UQF2 711 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 NR2E3Q9Y5X4 410 aa11.2□□□□□ -0.62
SYNE2-215ENST00000554997 UBE4BO95155 1302 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 TSPAN1O60635 241 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 ERLIN2O94905 339 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 PIGRP01833 764 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 CSF2RAP15509 400 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 FGFR4P22455 802 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 CD52P31358 61 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 NFX1Q12986 1120 aaKnown RBP11.19□□□□□ -0.62
SYNE2-215ENST00000554997 PAK2Q13177 524 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 STIM1Q13586 685 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 ZSCAN23Q3MJ62 389 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 PLEKHG4Q58EX7 1191 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 FAM228AQ86W67 206 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 SMYD4Q8IYR2 804 aaPredicted RBP11.19□□□□□ -0.62
SYNE2-215ENST00000554997 SEPT8Q92599 483 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 APBB2Q92870 758 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 FTHL17Q9BXU8 183 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 IFIH1Q9BYX4 1025 aaKnown RBP11.19□□□□□ -0.62
SYNE2-215ENST00000554997 PTPRHQ9HD43 1115 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 CGNQ9P2M7 1197 aaKnown RBP11.19□□□□□ -0.62
SYNE2-215ENST00000554997 TNFSF13BQ9Y275 285 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 STYXL1Q9Y6J8 313 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 ARID2Q68CP9 1835 aa11.19□□□□□ -0.62
SYNE2-215ENST00000554997 KAT6AQ92794 2004 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 CNTNAP2Q9UHC6 1331 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 SYCE3A1L190 88 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 TTLL13PA6NNM8 815 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 PDXKO00764 312 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 B4GALT5O43286 388 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 TGFB1I1O43294 461 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 TOM1L1O75674 476 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 PFKMP08237 780 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 CD44P16070 742 aaKnown RBP11.18□□□□□ -0.62
SYNE2-215ENST00000554997 ZSCAN20P17040 1043 aaPredicted RBP11.18□□□□□ -0.62
SYNE2-215ENST00000554997 ARF4P18085 180 aaPredicted RBP11.18□□□□□ -0.62
SYNE2-215ENST00000554997 MLLT1Q03111 559 aaPredicted RBP11.18□□□□□ -0.62
SYNE2-215ENST00000554997 DSC3Q14574 896 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 ATF7IP2Q5U623 682 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 SLFN12LQ6IEE8 588 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 CENPPQ6IPU0 288 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 SYCP3Q8IZU3 236 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 DBF4BQ8NFT6 615 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 TMEM174Q8WUU8 243 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 BADQ92934 168 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 VWCEQ96DN2 955 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 TARS2Q9BW92 718 aaKnown RBP11.18□□□□□ -0.62
SYNE2-215ENST00000554997 TRAIPQ9BWF2 469 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 GBP3Q9H0R5 595 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 KCTD10Q9H3F6 313 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 TMX1Q9H3N1 280 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 AGPAT5Q9NUQ2 364 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 ANO10Q9NW15 660 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 TRAF3IP3Q9Y228 551 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 USP20Q9Y2K6 914 aa11.18□□□□□ -0.62
SYNE2-215ENST00000554997 ALPK3Q96L96 1907 aa11.17□□□□□ -0.62
SYNE2-215ENST00000554997 ANKRD63C9JTQ0 380 aa11.17□□□□□ -0.62
SYNE2-215ENST00000554997 ENPP3O14638 875 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms