RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SIGLEC1Q9BZZ2 1709 aa2.07□□□□□ -2.08
PRPF39-208ENST00000554785 FER1L4A9Z1Z3 1794 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-208ENST00000554785 TGM5O43548 720 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 RAB11FIP3O75154 756 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 ULK1O75385 1050 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 PRLP01236 227 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 CYP17A1P05093 508 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 PDGFRBP09619 1106 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 C1SP09871 688 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 MSX2P35548 267 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-208ENST00000554785 ALDH6A1Q02252 535 aaKnown RBP2.06□□□□□ -2.08
PRPF39-208ENST00000554785 FAPQ12884 760 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 FOXE3Q13461 319 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 DDB1Q16531 1140 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 ZNF568Q3ZCX4 644 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 BRDTQ58F21 947 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-208ENST00000554785 IQSEC1Q6DN90 963 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 UNQ6494/PRO21346Q6UXR6 183 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 SLC5A5Q92911 643 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 CEP89Q96ST8 783 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 PUS7LQ9H0K6 701 aaKnown RBP2.06□□□□□ -2.08
PRPF39-208ENST00000554785 C11orf21Q9P2W6 132 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 PUF60Q9UHX1 559 aaKnown RBP2.06□□□□□ -2.08
PRPF39-208ENST00000554785 FBXO10Q9UK96 956 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 GOLGB1Q14789 3259 aaKnown RBP2.06□□□□□ -2.08
PRPF39-208ENST00000554785 BCORL1Q5H9F3 1711 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 TEX14Q8IWB6 1497 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 C2orf78A6NCI8 922 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 SLC26A4O43511 780 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 NARSO43776 548 aaKnown RBP2.06□□□□□ -2.08
PRPF39-208ENST00000554785 KATNA1O75449 491 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 PRKD3O94806 890 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 APEX1P27695 318 aaKnown RBP2.06□□□□□ -2.08
PRPF39-208ENST00000554785 LSP1P33241 339 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 SESN3P58005 492 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 ADAM8P78325 824 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 PHC1P78364 1004 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 SMAD3P84022 425 aaKnown RBP2.06□□□□□ -2.08
PRPF39-208ENST00000554785 ATP2C1P98194 919 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-208ENST00000554785 EXOSC10Q01780 885 aaKnown RBP2.06□□□□□ -2.08
PRPF39-208ENST00000554785 SLC6A3Q01959 620 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 ITKQ08881 620 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 LRRC32Q14392 662 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 GRM7Q14831 915 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 TERF2Q15554 542 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 PLEKHG6Q3KR16 790 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 NRN1LQ496H8 165 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 MIIPQ5JXC2 388 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 GPR158Q5T848 1215 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 BROXQ5VW32 411 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 HDGFL2Q7Z4V5 671 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-208ENST00000554785 C1orf210Q8IVY1 113 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 ZZZ3Q8IYH5 903 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 RTKN2Q8IZC4 609 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 COG1Q8WTW3 980 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 C16orf92Q96LL3 132 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 GPHA2Q96T91 129 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 TLR9Q9NR96 1032 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 SH3BP1Q9Y3L3 701 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 CTDP1Q9Y5B0 961 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-208ENST00000554785 EPRSP07814 1512 aaKnown RBP2.06□□□□□ -2.08
PRPF39-208ENST00000554785 FHAD1B1AJZ9 1412 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 EP400Q96L91 3159 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 ADAMTSL3P82987 1691 aa2.06□□□□□ -2.08
PRPF39-208ENST00000554785 MED1Q15648 1581 aaPredicted RBP2.05□□□□□ -2.08
PRPF39-208ENST00000554785 CD40P25942 277 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 FNTBP49356 437 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 MEOX1P50221 254 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 ADCY7P51828 1080 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 ADCY1Q08828 1119 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 ABHD18Q0P651 414 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 MTMR1Q13613 665 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 MYBPC3Q14896 1274 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 EPHA7Q15375 998 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 FNDC7Q5VTL7 733 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 ESRP1Q6NXG1 681 aaKnown RBP2.05□□□□□ -2.08
PRPF39-208ENST00000554785 FRMD7Q6ZUT3 714 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 POLNQ7Z5Q5 900 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 RASSF3Q86WH2 238 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 NME9Q86XW9 330 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 CNTD1Q8N815 330 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 ZNF610Q8N9Z0 462 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 CLRN3Q8NCR9 226 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 SHCBP1Q8NEM2 672 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 NKD2Q969F2 451 aaPredicted RBP2.05□□□□□ -2.08
PRPF39-208ENST00000554785 MTMR8Q96EF0 704 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 RPL10LQ96L21 214 aaKnown RBP2.05□□□□□ -2.08
PRPF39-208ENST00000554785 FOXB1Q99853 325 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 ZNF341Q9BYN7 854 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 TRIM8Q9BZR9 551 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 ZMAT4Q9H898 229 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 NOC2LQ9Y3T9 749 aaKnown RBP2.05□□□□□ -2.08
PRPF39-208ENST00000554785 STRCQ7RTU9 1775 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 PTPRGP23470 1445 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 CFAP43Q8NDM7 1665 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 LCHNA4D1U4 455 aa2.05□□□□□ -2.08
PRPF39-208ENST00000554785 S100BP04271 92 aaPredicted RBP2.05□□□□□ -2.08
PRPF39-208ENST00000554785 HIBADHP31937 336 aaKnown RBP2.05□□□□□ -2.08
PRPF39-208ENST00000554785 DPTQ07507 201 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms