RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 TRIP11Q15643 1979 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 K7ENM7 598 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 K7ERI5 159 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 ACKR2O00590 384 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 FGBP02675 491 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 PRKCBP05771 671 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 PFKMP08237 780 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 ARF4P18085 180 aaPredicted RBP14.36□□□□□ -0.11
RAB5C-206ENST00000550406 SFPQP23246 707 aaKnown RBP eCLIP14.36□□□□□ -0.11
RAB5C-206ENST00000550406 HOXD13P35453 343 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 EFNA5P52803 228 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 SMTNP53814 917 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 KCNA1Q09470 495 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 STK4Q13043 487 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 SHHQ15465 462 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 CAMK4Q16566 473 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 UBXN11Q5T124 520 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 RASIP1Q5U651 963 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.36□□□□□ -0.11
RAB5C-206ENST00000550406 EPM2AIP1Q7L775 607 aaPredicted RBP14.36□□□□□ -0.11
RAB5C-206ENST00000550406 OTOP2Q7RTS6 562 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 HERVK_113Q902F9 699 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 APBB2Q92870 758 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 CPB2Q96IY4 423 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 CLSTN2Q9H4D0 955 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 MRPL44Q9H9J2 332 aaKnown RBP14.36□□□□□ -0.11
RAB5C-206ENST00000550406 SLC39A2Q9NP94 309 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 AGPAT5Q9NUQ2 364 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 PRMT7Q9NVM4 692 aaPredicted RBP14.36□□□□□ -0.11
RAB5C-206ENST00000550406 CXXC1Q9P0U4 656 aaPredicted RBP14.36□□□□□ -0.11
RAB5C-206ENST00000550406 TBX20Q9UMR3 447 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 PHLPP2Q6ZVD8 1323 aa14.36□□□□□ -0.11
RAB5C-206ENST00000550406 CEP290O15078 2479 aa14.35□□□□□ -0.11
RAB5C-206ENST00000550406 PRPF6O94906 941 aaKnown RBP14.35□□□□□ -0.11
RAB5C-206ENST00000550406 RHOBTB3O94955 611 aa14.35□□□□□ -0.11
RAB5C-206ENST00000550406 BMP8BP34820 402 aa14.35□□□□□ -0.11
RAB5C-206ENST00000550406 KCNB1Q14721 858 aa14.35□□□□□ -0.11
RAB5C-206ENST00000550406 PCBP1Q15365 356 aaKnown RBP eCLIP14.35□□□□□ -0.11
RAB5C-206ENST00000550406 MAPK6Q16659 721 aa14.35□□□□□ -0.11
RAB5C-206ENST00000550406 FAM26FQ5R3K3 315 aa14.35□□□□□ -0.11
RAB5C-206ENST00000550406 EEF1DP3Q658K8 133 aa14.35□□□□□ -0.11
RAB5C-206ENST00000550406 CDR2LQ86X02 465 aaPredicted RBP14.35□□□□□ -0.11
RAB5C-206ENST00000550406 KIAA0895Q8NCT3 520 aa14.35□□□□□ -0.11
RAB5C-206ENST00000550406 PRIMPOLQ96LW4 560 aa14.35□□□□□ -0.11
RAB5C-206ENST00000550406 ACO2Q99798 780 aaKnown RBP14.35□□□□□ -0.11
RAB5C-206ENST00000550406 ADAM2Q99965 735 aa14.35□□□□□ -0.11
RAB5C-206ENST00000550406 TSPYL2Q9H2G4 693 aaPredicted RBP14.35□□□□□ -0.11
RAB5C-206ENST00000550406 FNDC1Q4ZHG4 1894 aaPredicted RBP14.35□□□□□ -0.11
RAB5C-206ENST00000550406 A0A1B0GUA9 196 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 ABHD14A-ACY1A0A1B0GW23 586 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 ABLIM1O14639 778 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 FAM189BP81408 668 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 PSMD2Q13200 908 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 PRPF4BQ13523 1007 aaKnown RBP14.34□□□□□ -0.11
RAB5C-206ENST00000550406 IKBKEQ14164 716 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 SLC39A4Q6P5W5 647 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 PSRC1Q6PGN9 363 aaPredicted RBP14.34□□□□□ -0.11
RAB5C-206ENST00000550406 CRIPAKQ8N1N5 446 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 ZNF507Q8TCN5 953 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 ZBTB45Q96K62 511 aaPredicted RBP14.34□□□□□ -0.11
RAB5C-206ENST00000550406 TARS2Q9BW92 718 aaKnown RBP14.34□□□□□ -0.11
RAB5C-206ENST00000550406 FTHL17Q9BXU8 183 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 UBE2OQ9C0C9 1292 aaKnown RBP14.34□□□□□ -0.11
RAB5C-206ENST00000550406 HAPLN2Q9GZV7 340 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 PDZD7Q9H5P4 517 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 PTPRHQ9HD43 1115 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 CHST12Q9NRB3 414 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 RGS18Q9NS28 235 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 MAN1B1Q9UKM7 699 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 PIN4Q9Y237 131 aaKnown RBP14.34□□□□□ -0.11
RAB5C-206ENST00000550406 CNTNAP2Q9UHC6 1331 aa14.34□□□□□ -0.11
RAB5C-206ENST00000550406 C9IYK1 514 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 ANKRD63C9JTQ0 380 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 H0YCG3 227 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 ERLIN2O94905 339 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 GCNT3O95395 438 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 MBD3O95983 291 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 BMP6P22004 513 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 PROZP22891 400 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 AXLP30530 894 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 WDR5P61964 334 aaKnown RBP14.33□□□□□ -0.12
RAB5C-206ENST00000550406 DEFB103AP81534 67 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 L1TD1Q5T7N2 865 aaKnown RBP14.33□□□□□ -0.12
RAB5C-206ENST00000550406 MAP4K3Q8IVH8 894 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 SLC17A8Q8NDX2 589 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 SCFD1Q8WVM8 642 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 SMARCE1Q969G3 411 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 CCDC34Q96HJ3 373 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 GSDMAQ96QA5 445 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 EIF2AQ9BY44 585 aaKnown RBP14.33□□□□□ -0.12
RAB5C-206ENST00000550406 EXOC1Q9NV70 894 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 GDAQ9Y2T3 454 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 PCDHB13Q9Y5F0 798 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 ANK1P16157 1881 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 COL4A6Q14031 1691 aa14.33□□□□□ -0.12
RAB5C-206ENST00000550406 TISP43B9A030 160 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 BAIAP3O94812 1187 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 SMC2O95347 1197 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 PIGRP01833 764 aa14.32□□□□□ -0.12
RAB5C-206ENST00000550406 ACTN1P12814 892 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms