RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SLC26A4O43511 780 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 LRRN2O75325 713 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 SKAP2O75563 359 aaPredicted RBP14.79□□□□□ -0.04
HDAC7-228ENST00000548938 TRIM49P0CI25 452 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 TRIM49CP0CI26 452 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 TNFAIP3P21580 790 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 CHRNA3P32297 505 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 FMO5P49326 533 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 FRMPD4Q14CM0 1322 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 ARHGAP44Q17R89 818 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 TNFAIP8L3Q5GJ75 292 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 MFSD14BQ5SR56 506 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 CNKSR2Q8WXI2 1034 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 L3MBTL3Q96JM7 780 aaPredicted RBP14.79□□□□□ -0.04
HDAC7-228ENST00000548938 MBOAT7Q96N66 472 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 SYNGAP1Q96PV0 1343 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 TMEM109Q9BVC6 243 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 ECT2Q9H8V3 914 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 CYP3A7-CYP3A51PA0A087WV96 503 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 IGF2BP3O00425 579 aaKnown RBP eCLIP14.79□□□□□ -0.04
HDAC7-228ENST00000548938 NPR1P16066 1061 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 CYP3A7P24462 503 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 PDE6CP51160 858 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 COG2Q14746 738 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 QRICH1Q2TAL8 776 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 EXOC3L1Q86VI1 746 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 CCDC25Q86WR0 208 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 KSR1Q8IVT5 923 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 KIF2BQ8N4N8 673 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 ERMNQ8TAM6 284 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 TRIM6Q9C030 488 aaPredicted RBP14.79□□□□□ -0.04
HDAC7-228ENST00000548938 SLC24A3Q9HC58 644 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 USP40Q9NVE5 1235 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 CHORDC1Q9UHD1 332 aaPredicted RBP14.79□□□□□ -0.04
HDAC7-228ENST00000548938 PTPN22Q9Y2R2 807 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 TCRBV7S2A1N4TA0A589 114 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 ANKRD62A6NC57 917 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 A8MUI8 341 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 CREB1P16220 341 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 NMT1P30419 496 aaKnown RBP14.79□□□□□ -0.04
HDAC7-228ENST00000548938 PSMC2P35998 433 aaKnown RBP14.79□□□□□ -0.04
HDAC7-228ENST00000548938 SLC8A3P57103 927 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 ARHGAP4P98171 946 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 ZC2HC1CQ53FD0 456 aaPredicted RBP14.79□□□□□ -0.04
HDAC7-228ENST00000548938 CCDC137Q6PK04 289 aaKnown RBP14.79□□□□□ -0.04
HDAC7-228ENST00000548938 BTNL9Q6UXG8 535 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 MAB21L3Q8N8X9 362 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 SLC20A1Q8WUM9 679 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 DYDC1Q8WWB3 177 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 INTS2Q9H0H0 1204 aaKnown RBP14.79□□□□□ -0.04
HDAC7-228ENST00000548938 PCYOX1Q9UHG3 505 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 USP15Q9Y4E8 981 aaPredicted RBP14.79□□□□□ -0.04
HDAC7-228ENST00000548938 PCDHA1Q9Y5I3 950 aa14.79□□□□□ -0.04
HDAC7-228ENST00000548938 NRXN2Q9P2S2 1712 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 GAKO14976 1311 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 TCP11X1B4DZS4 312 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 RAD21O60216 631 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 CTNNA2P26232 953 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
HDAC7-228ENST00000548938 PPP2R5AQ15172 486 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 LONRF1Q17RB8 773 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 ZSWIM1Q9BR11 485 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 STMN4Q9H169 189 aaPredicted RBP14.78□□□□□ -0.04
HDAC7-228ENST00000548938 MLXIPLQ9NP71 852 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 CTTNBP2NLQ9P2B4 639 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 TNS1Q9HBL0 1735 aaKnown RBP14.78□□□□□ -0.04
HDAC7-228ENST00000548938 PFASO15067 1338 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 MYCNP04198 464 aaPredicted RBP14.78□□□□□ -0.04
HDAC7-228ENST00000548938 SLURP2P0DP57 97 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 ALADP13716 330 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 PDE6BP35913 854 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 GPATCH4Q5T3I0 446 aaKnown RBP14.78□□□□□ -0.04
HDAC7-228ENST00000548938 TAOK1Q7L7X3 1001 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 CCHCR1Q8TD31 782 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 LENG9Q96B70 501 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 DDX23Q9BUQ8 820 aaKnown RBP14.78□□□□□ -0.04
HDAC7-228ENST00000548938 APEX2Q9UBZ4 518 aa14.78□□□□□ -0.04
HDAC7-228ENST00000548938 FOXO6A8MYZ6 492 aa14.77□□□□□ -0.04
HDAC7-228ENST00000548938 KRT16P08779 473 aa14.77□□□□□ -0.04
HDAC7-228ENST00000548938 ALAS1P13196 640 aa14.77□□□□□ -0.04
HDAC7-228ENST00000548938 RARGP13631 454 aa14.77□□□□□ -0.04
HDAC7-228ENST00000548938 EN1Q05925 392 aaPredicted RBP14.77□□□□□ -0.04
HDAC7-228ENST00000548938 CTTNQ14247 550 aaKnown RBP14.77□□□□□ -0.04
HDAC7-228ENST00000548938 GALNTL6Q49A17 601 aa14.77□□□□□ -0.04
HDAC7-228ENST00000548938 CROCCP2Q86T23 111 aa14.77□□□□□ -0.04
HDAC7-228ENST00000548938 ZNF570Q96NI8 536 aa14.77□□□□□ -0.04
HDAC7-228ENST00000548938 NOP53Q9NZM5 478 aaKnown RBP14.77□□□□□ -0.04
HDAC7-228ENST00000548938 PARP2Q9UGN5 583 aa14.77□□□□□ -0.04
HDAC7-228ENST00000548938 PNMA3Q9UL41 463 aa14.77□□□□□ -0.04
HDAC7-228ENST00000548938 BCS1LQ9Y276 419 aa14.77□□□□□ -0.04
HDAC7-228ENST00000548938 DAGLAQ9Y4D2 1042 aa14.77□□□□□ -0.04
HDAC7-228ENST00000548938 TMEM120BA0PK00 339 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 FAM86B1E9PN63 330 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 PODXLO00592 558 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 MEIS2O14770 477 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 RIMBP2O15034 1052 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 FAM86B2P0C5J1 330 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 CDC25CP30307 473 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 KCNJ1P48048 391 aa14.77□□□□□ -0.05
HDAC7-228ENST00000548938 CYP2J2P51589 502 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms