RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 SMARCE1Q969G3 411 aa17.15■□□□□ 0.34
CTTN-215ENST00000533931 NUP62CLQ9H1M0 184 aa17.15■□□□□ 0.34
CTTN-215ENST00000533931 POLD4Q9HCU8 107 aa17.15■□□□□ 0.34
CTTN-215ENST00000533931 RNF216Q9NWF9 866 aaPredicted RBP17.15■□□□□ 0.34
CTTN-215ENST00000533931 TSPAN1O60635 241 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 KIF20AO95235 890 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 PRKCBP05771 671 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 CASP1P29466 404 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 BMP8BP34820 402 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 IKBKEQ14164 716 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 BMT2Q1RMZ1 405 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 KLHL40Q2TBA0 621 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 COBLL1Q53SF7 1204 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 EPM2AIP1Q7L775 607 aaPredicted RBP17.14■□□□□ 0.33
CTTN-215ENST00000533931 TRIML1Q8N9V2 468 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 SYAP1Q96A49 352 aaPredicted RBP17.14■□□□□ 0.33
CTTN-215ENST00000533931 ZNF668Q96K58 619 aaPredicted RBP17.14■□□□□ 0.33
CTTN-215ENST00000533931 GDF15Q99988 308 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 KIFC3Q9BVG8 833 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 MRPL4Q9BYD3 311 aaKnown RBP17.14■□□□□ 0.33
CTTN-215ENST00000533931 C1orf112Q9NSG2 853 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 TBX20Q9UMR3 447 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 EXOC7Q9UPT5 735 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 PCDHA5Q9Y5H7 936 aa17.14■□□□□ 0.33
CTTN-215ENST00000533931 TNRC18O15417 2968 aaPredicted RBP17.14■□□□□ 0.33
CTTN-215ENST00000533931 H0YGN5 161 aa17.13■□□□□ 0.33
CTTN-215ENST00000533931 GCNT3O95395 438 aa17.13■□□□□ 0.33
CTTN-215ENST00000533931 SKIP12755 728 aa17.13■□□□□ 0.33
CTTN-215ENST00000533931 PPP1R2P41236 205 aa17.13■□□□□ 0.33
CTTN-215ENST00000533931 MAGEA10P43363 369 aaPredicted RBP17.13■□□□□ 0.33
CTTN-215ENST00000533931 SNRPFP62306 86 aaKnown RBP17.13■□□□□ 0.33
CTTN-215ENST00000533931 NFX1Q12986 1120 aaKnown RBP17.13■□□□□ 0.33
CTTN-215ENST00000533931 PRPF4BQ13523 1007 aaKnown RBP17.13■□□□□ 0.33
CTTN-215ENST00000533931 DSC3Q14574 896 aa17.13■□□□□ 0.33
CTTN-215ENST00000533931 L1TD1Q5T7N2 865 aaKnown RBP17.13■□□□□ 0.33
CTTN-215ENST00000533931 NOTUMQ6P988 496 aa17.13■□□□□ 0.33
CTTN-215ENST00000533931 TAS1R3Q7RTX0 852 aa17.13■□□□□ 0.33
CTTN-215ENST00000533931 APBB1IPQ7Z5R6 666 aaPredicted RBP17.13■□□□□ 0.33
CTTN-215ENST00000533931 DEFB128Q7Z7B8 93 aa17.13■□□□□ 0.33
CTTN-215ENST00000533931 TSPYL2Q9H2G4 693 aaPredicted RBP17.13■□□□□ 0.33
CTTN-215ENST00000533931 MTIF3Q9H2K0 278 aaKnown RBP17.13■□□□□ 0.33
CTTN-215ENST00000533931 TMEM206Q9H813 350 aa17.13■□□□□ 0.33
CTTN-215ENST00000533931 KIAA1468Q9P260 1216 aa17.13■□□□□ 0.33
CTTN-215ENST00000533931 A0A1B0GUA9 196 aa17.12■□□□□ 0.33
CTTN-215ENST00000533931 N4BP3O15049 544 aa17.12■□□□□ 0.33
CTTN-215ENST00000533931 FGBP02675 491 aa17.12■□□□□ 0.33
CTTN-215ENST00000533931 ZSCAN20P17040 1043 aaPredicted RBP17.12■□□□□ 0.33
CTTN-215ENST00000533931 NMT1P30419 496 aaKnown RBP17.12■□□□□ 0.33
CTTN-215ENST00000533931 HOXA11P31270 313 aaPredicted RBP17.12■□□□□ 0.33
CTTN-215ENST00000533931 RAB27AP51159 221 aa17.12■□□□□ 0.33
CTTN-215ENST00000533931 RBM43Q6ZSC3 357 aaKnown RBP17.12■□□□□ 0.33
CTTN-215ENST00000533931 C16orf59Q7L2K0 433 aa17.12■□□□□ 0.33
CTTN-215ENST00000533931 ZNF507Q8TCN5 953 aa17.12■□□□□ 0.33
CTTN-215ENST00000533931 RSPH1Q8WYR4 309 aa17.12■□□□□ 0.33
CTTN-215ENST00000533931 HERVK_113Q902F9 699 aa17.12■□□□□ 0.33
CTTN-215ENST00000533931 ACCSQ96QU6 501 aa17.12■□□□□ 0.33
CTTN-215ENST00000533931 OSBPL7Q9BZF2 842 aa17.12■□□□□ 0.33
CTTN-215ENST00000533931 TMX1Q9H3N1 280 aa17.12■□□□□ 0.33
CTTN-215ENST00000533931 RGS18Q9NS28 235 aa17.12■□□□□ 0.33
CTTN-215ENST00000533931 TNFSF13BQ9Y275 285 aa17.12■□□□□ 0.33
CTTN-215ENST00000533931 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
CTTN-215ENST00000533931 TOM1L1O75674 476 aa17.11■□□□□ 0.33
CTTN-215ENST00000533931 ARF4P18085 180 aaPredicted RBP17.11■□□□□ 0.33
CTTN-215ENST00000533931 TMEM240Q5SV17 173 aa17.11■□□□□ 0.33
CTTN-215ENST00000533931 CCDC183Q5T5S1 534 aa17.11■□□□□ 0.33
CTTN-215ENST00000533931 ZNF658Q5TYW1 1059 aaPredicted RBP17.11■□□□□ 0.33
CTTN-215ENST00000533931 RASIP1Q5U651 963 aa17.11■□□□□ 0.33
CTTN-215ENST00000533931 CGNQ9P2M7 1197 aaKnown RBP17.11■□□□□ 0.33
CTTN-215ENST00000533931 PIN4Q9Y237 131 aaKnown RBP17.11■□□□□ 0.33
CTTN-215ENST00000533931 ZNF623O75123 536 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 CSDE1O75534 798 aaKnown RBP17.1■□□□□ 0.33
CTTN-215ENST00000533931 MYBP10242 640 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 PROZP22891 400 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 CASP5P51878 434 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 EPHB4P54760 987 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 FAM189BP81408 668 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 STK4Q13043 487 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 DCAF4L1Q3SXM0 396 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 ATF7IP2Q5U623 682 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 SLC27A1Q6PCB7 646 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 ZNF365Q70YC5 407 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 SLC24A5Q71RS6 500 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 MYOCDQ8IZQ8 938 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 GUF1Q8N442 669 aaKnown RBP17.1■□□□□ 0.33
CTTN-215ENST00000533931 KIAA0895Q8NCT3 520 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 GOLGA5Q8TBA6 731 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 TMEM174Q8WUU8 243 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 SCFD1Q8WVM8 642 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 ACO2Q99798 780 aaKnown RBP17.1■□□□□ 0.33
CTTN-215ENST00000533931 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.1■□□□□ 0.335e-11■■■■□ 24.4
CTTN-215ENST00000533931 ADPGKQ9BRR6 497 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 ELAC1Q9H777 363 aaKnown RBP17.1■□□□□ 0.33
CTTN-215ENST00000533931 TBC1D7Q9P0N9 293 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 ZMYM2Q9UBW7 1377 aa17.1■□□□□ 0.33
CTTN-215ENST00000533931 A0A0U1RQF3 1178 aa17.09■□□□□ 0.33
CTTN-215ENST00000533931 HNRNPDLO14979 420 aaKnown RBP17.09■□□□□ 0.33
CTTN-215ENST00000533931 B4GALT5O43286 388 aa17.09■□□□□ 0.33
CTTN-215ENST00000533931 FGFR4P22455 802 aa17.09■□□□□ 0.33
CTTN-215ENST00000533931 MORC3Q14149 939 aa17.09■□□□□ 0.33
CTTN-215ENST00000533931 HSP90AA2PQ14568 343 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms