RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 GLIS3Q8NEA6 775 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 LINC01599Q8WXQ3 324 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 CPB2Q96IY4 423 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 FIZ1Q96SL8 496 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 NTPCRQ9BSD7 190 aaKnown RBP12.56□□□□□ -0.4
CHD7-209ENST00000529472 FGFBP2Q9BYJ0 223 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 OLFML3Q9NRN5 406 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 KCNG1Q9UIX4 513 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 CHD9Q3L8U1 2897 aa12.56□□□□□ -0.4
CHD7-209ENST00000529472 CHD7Q9P2D1 2997 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 PVALEFA0A1B0GWK0 134 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 TTLL13PA6NNM8 815 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 MBD3O95983 291 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 MYBP10242 640 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 ARF4P18085 180 aaPredicted RBP12.55□□□□□ -0.4
CHD7-209ENST00000529472 CASP5P51878 434 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 NCBP1Q09161 790 aaKnown RBP12.55□□□□□ -0.4
CHD7-209ENST00000529472 C9orf50Q5SZB4 431 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 CHRDL2Q6WN34 429 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 SMARCE1Q969G3 411 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 CCDC47Q96A33 483 aaKnown RBP12.55□□□□□ -0.4
CHD7-209ENST00000529472 BICD1Q96G01 975 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 ADAM2Q99965 735 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 FTHL17Q9BXU8 183 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 FZD8Q9H461 694 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 TMEM134Q9H6X4 195 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 SLC39A2Q9NP94 309 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 CNTNAP2Q9UHC6 1331 aa12.55□□□□□ -0.4
CHD7-209ENST00000529472 ABHD14A-ACY1A0A1B0GW23 586 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 ACKR2O00590 384 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 BAIAP3O94812 1187 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 SMC2O95347 1197 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 ZSCAN20P17040 1043 aaPredicted RBP12.54□□□□□ -0.4
CHD7-209ENST00000529472 KCNJ6P48051 423 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 EHHADHQ08426 723 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 PCBP1Q15365 356 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHD7-209ENST00000529472 SHHQ15465 462 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 FAM187BQ17R55 369 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 NT5DC1Q5TFE4 455 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 TWF2Q6IBS0 349 aaKnown RBP12.54□□□□□ -0.4
CHD7-209ENST00000529472 NOTUMQ6P988 496 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 PPP4R3CPQ6ZMV5 832 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHD7-209ENST00000529472 ZNF720Q7Z2F6 126 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 CDR2LQ86X02 465 aaPredicted RBP12.54□□□□□ -0.4
CHD7-209ENST00000529472 SLC17A8Q8NDX2 589 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 HERVK_113Q902F9 699 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 RNPC3Q96LT9 517 aaKnown RBP12.54□□□□□ -0.4
CHD7-209ENST00000529472 PRIMPOLQ96LW4 560 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 MRPL4Q9BYD3 311 aaKnown RBP12.54□□□□□ -0.4
CHD7-209ENST00000529472 NUP62CLQ9H1M0 184 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 TSPYL2Q9H2G4 693 aaPredicted RBP12.54□□□□□ -0.4
CHD7-209ENST00000529472 CLSTN2Q9H4D0 955 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 CXXC1Q9P0U4 656 aaPredicted RBP12.54□□□□□ -0.4
CHD7-209ENST00000529472 TBX20Q9UMR3 447 aa12.54□□□□□ -0.4
CHD7-209ENST00000529472 HNRNPDLO14979 420 aaKnown RBP12.53□□□□□ -0.4
CHD7-209ENST00000529472 PPP1R37O75864 691 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 PRPF6O94906 941 aaKnown RBP12.53□□□□□ -0.4
CHD7-209ENST00000529472 SCP2P22307 547 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 AXLP30530 894 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 HOXA11P31270 313 aaPredicted RBP12.53□□□□□ -0.4
CHD7-209ENST00000529472 ABCD1P33897 745 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 WDR5P61964 334 aaKnown RBP12.53□□□□□ -0.4
CHD7-209ENST00000529472 GTF2BQ00403 316 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 KCNA1Q09470 495 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 STK4Q13043 487 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 ALCAMQ13740 583 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 DSC3Q14574 896 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 ATF7IP2Q5U623 682 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 STXBP4Q6ZWJ1 553 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 RTN4RL1Q86UN2 441 aaPredicted RBP12.53□□□□□ -0.4
CHD7-209ENST00000529472 ELOA2Q8IYF1 753 aaPredicted RBP12.53□□□□□ -0.4
CHD7-209ENST00000529472 MYOCDQ8IZQ8 938 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 KIAA0895Q8NCT3 520 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 TARS2Q9BW92 718 aaKnown RBP12.53□□□□□ -0.4
CHD7-209ENST00000529472 MTIF3Q9H2K0 278 aaKnown RBP12.53□□□□□ -0.4
CHD7-209ENST00000529472 ST6GALNAC4Q9H4F1 302 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 PDZD7Q9H5P4 517 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 CHST12Q9NRB3 414 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 RGS18Q9NS28 235 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 RMND1Q9NWS8 449 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 ANKFY1Q9P2R3 1169 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 PCDHB13Q9Y5F0 798 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 PCDHA5Q9Y5H7 936 aa12.53□□□□□ -0.4
CHD7-209ENST00000529472 PTPRSQ13332 1948 aa12.52□□□□□ -0.4
CHD7-209ENST00000529472 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.52□□□□□ -0.41
CHD7-209ENST00000529472 BIN1O00499 593 aa12.52□□□□□ -0.41
CHD7-209ENST00000529472 ENPP3O14638 875 aa12.52□□□□□ -0.41
CHD7-209ENST00000529472 N4BP3O15049 544 aa12.52□□□□□ -0.41
CHD7-209ENST00000529472 EFCAB14O75071 495 aa12.52□□□□□ -0.41
CHD7-209ENST00000529472 RHOBTB3O94955 611 aa12.52□□□□□ -0.41
CHD7-209ENST00000529472 NPTXRO95502 500 aa12.52□□□□□ -0.41
CHD7-209ENST00000529472 AMHP03971 560 aa12.52□□□□□ -0.41
CHD7-209ENST00000529472 HARSP12081 509 aaKnown RBP12.52□□□□□ -0.41
CHD7-209ENST00000529472 LIG4P49917 911 aa12.52□□□□□ -0.41
CHD7-209ENST00000529472 DEFB103AP81534 67 aa12.52□□□□□ -0.41
CHD7-209ENST00000529472 PSMD2Q13200 908 aa12.52□□□□□ -0.41
CHD7-209ENST00000529472 KCNB1Q14721 858 aa12.52□□□□□ -0.41
CHD7-209ENST00000529472 L1TD1Q5T7N2 865 aaKnown RBP12.52□□□□□ -0.41
CHD7-209ENST00000529472 PRPF38BQ5VTL8 546 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms