RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 PHKA2P46019 1235 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 GCGRP47871 477 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 NPEPPSP55786 919 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 CYP4A11Q02928 519 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 CTTNQ14247 550 aaKnown RBP11.34□□□□□ -0.59
TRIM35-204ENST00000521283 EMC2Q15006 297 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 ZNF174Q15697 407 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 LARP1BQ659C4 914 aaKnown RBP11.34□□□□□ -0.59
TRIM35-204ENST00000521283 ARL6IP4Q66PJ3 421 aaKnown RBP11.34□□□□□ -0.59
TRIM35-204ENST00000521283 PLA2G4FQ68DD2 849 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 MCTP1Q6DN14 999 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 PDE12Q6L8Q7 609 aaKnown RBP11.34□□□□□ -0.59
TRIM35-204ENST00000521283 DTHD1Q6ZMT9 781 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 BRAPQ7Z569 592 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 FERMT3Q86UX7 667 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 PRPF31Q8WWY3 499 aaKnown RBP11.34□□□□□ -0.59
TRIM35-204ENST00000521283 LINC01599Q8WXQ3 324 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 PGBD4Q96DM1 585 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 CCDC51Q96ER9 411 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 INTS4Q96HW7 963 aaKnown RBP11.34□□□□□ -0.59
TRIM35-204ENST00000521283 FDXACB1Q9BRP7 624 aaPredicted RBP11.34□□□□□ -0.59
TRIM35-204ENST00000521283 C17orf80Q9BSJ5 609 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 MRPL9Q9BYD2 267 aaKnown RBP11.34□□□□□ -0.59
TRIM35-204ENST00000521283 TMEM117Q9H0C3 514 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 STK39Q9UEW8 545 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 LRWD1Q9UFC0 647 aa11.34□□□□□ -0.59
TRIM35-204ENST00000521283 COL4A4P53420 1690 aaPredicted RBP11.33□□□□□ -0.6
TRIM35-204ENST00000521283 ZNF623O75123 536 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 ARHGEF15O94989 841 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 LAG3P18627 525 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 PPM1AP35813 382 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 SLC19A1P41440 591 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 RARRES1P49788 294 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 LAMTOR4Q0VGL1 99 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 CUL4AQ13619 759 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 KRT79Q5XKE5 535 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 CATSPER4Q7RTX7 472 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 CATSPER3Q86XQ3 398 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 IGSF22Q8N9C0 903 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 PPM1EQ8WY54 764 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 HLA-CQ95604 372 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 NLRP4Q96MN2 994 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 TMEM60Q9H2L4 133 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 IFT122Q9HBG6 1241 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 UBN1Q9NPG3 1134 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 WRAP73Q9P2S5 460 aaPredicted RBP11.33□□□□□ -0.6
TRIM35-204ENST00000521283 MTUS1Q9ULD2 1270 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 PHLPP2Q6ZVD8 1323 aa11.33□□□□□ -0.6
TRIM35-204ENST00000521283 EPOPA6NHQ4 379 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 RFXAPO00287 272 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 MGEA5O60502 916 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 DTNBO60941 627 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 ERLIN2O94905 339 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 SPATA31C1P0DKV0 1188 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 DRP2Q13474 957 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 BMS1Q14692 1282 aaKnown RBP11.32□□□□□ -0.6
TRIM35-204ENST00000521283 PPP2R5AQ15172 486 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 SKIV2LQ15477 1246 aaKnown RBP11.32□□□□□ -0.6
TRIM35-204ENST00000521283 CCDC85BQ15834 202 aaPredicted RBP11.32□□□□□ -0.6
TRIM35-204ENST00000521283 SPOUT1Q5T280 376 aaKnown RBP11.32□□□□□ -0.6
TRIM35-204ENST00000521283 TWF2Q6IBS0 349 aaKnown RBP11.32□□□□□ -0.6
TRIM35-204ENST00000521283 ECHDC2Q86YB7 292 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 HACE1Q8IYU2 909 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 LRRC43Q8N309 656 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 MICALL1Q8N3F8 863 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 C4orf32Q8N8J7 132 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 GDPD5Q8WTR4 605 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 PRIMPOLQ96LW4 560 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 AK8Q96MA6 479 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 ASB2Q96Q27 587 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 PPP1R16BQ96T49 567 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 SLC6A16Q9GZN6 736 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 NT5C3AQ9H0P0 336 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 NSUN3Q9H649 340 aaKnown RBP11.32□□□□□ -0.6
TRIM35-204ENST00000521283 AGPAT5Q9NUQ2 364 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 PUF60Q9UHX1 559 aaKnown RBP11.32□□□□□ -0.6
TRIM35-204ENST00000521283 LZTS1Q9Y250 596 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 UNC80Q8N2C7 3258 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 CNTNAP2Q9UHC6 1331 aa11.32□□□□□ -0.6
TRIM35-204ENST00000521283 ARHGEF35A5YM69 484 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 TMEM150BA6NC51 233 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 TBKBP1A7MCY6 615 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 SRGAP2CP0DJJ0 459 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 ARL2P36404 184 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 CCT6AP40227 531 aaKnown RBP11.31□□□□□ -0.6
TRIM35-204ENST00000521283 PTENP60484 403 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 LIAT1Q6ZQX7 453 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 TRIM67Q6ZTA4 783 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 RNF149Q8NC42 400 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 TMEM143Q96AN5 459 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 THAP11Q96EK4 314 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 SPSB2Q99619 263 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 SH2D3AQ9BRG2 576 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 TIPINQ9BVW5 301 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 C2orf40Q9H1Z8 148 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 KANSL3Q9P2N6 904 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 PLAGL2Q9UPG8 496 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 DNM3Q9UQ16 869 aa11.31□□□□□ -0.6
TRIM35-204ENST00000521283 PIN4Q9Y237 131 aaKnown RBP11.31□□□□□ -0.6
TRIM35-204ENST00000521283 FAM50BQ9Y247 325 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms