RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 TNIP1Q15025 636 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 EPC2Q52LR7 807 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 PLA2G4FQ68DD2 849 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 RPUSD2Q8IZ73 545 aaKnown RBP11.81□□□□□ -0.52
LIN54-207ENST00000508171 XXYLT1Q8NBI6 393 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 UBLCP1Q8WVY7 318 aaPredicted RBP11.81□□□□□ -0.52
LIN54-207ENST00000508171 PCDHB18PQ96TA0 734 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 POP1Q99575 1024 aaKnown RBP11.81□□□□□ -0.52
LIN54-207ENST00000508171 TMBIM4Q9HC24 238 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 DBR1Q9UK59 544 aaKnown RBP11.81□□□□□ -0.52
LIN54-207ENST00000508171 TTC7AQ9ULT0 858 aaPredicted RBP11.81□□□□□ -0.52
LIN54-207ENST00000508171 TMEM110-MUSTN1A8MSY1 372 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 CLSTN1O94985 981 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 SGPL1O95470 568 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 ADRB2P07550 413 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 HPDP32754 393 aaPredicted RBP11.81□□□□□ -0.52
LIN54-207ENST00000508171 MARCKSL1P49006 195 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 RPS6P62753 249 aaKnown RBP11.81□□□□□ -0.52
LIN54-207ENST00000508171 GTF2BQ00403 316 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 ZNF844Q08AG5 666 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 MYBPC2Q14324 1141 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 PCNX4Q63HM2 1172 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 FAM83AQ86UY5 434 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 KRT35Q92764 455 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 KIFC3Q9BVG8 833 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 TMEM117Q9H0C3 514 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 CTTNBP2NLQ9P2B4 639 aa11.81□□□□□ -0.52
LIN54-207ENST00000508171 ASTN2O75129 1339 aaPredicted RBP11.81□□□□□ -0.52
LIN54-207ENST00000508171 ANKRD63C9JTQ0 380 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 EBAG9O00559 213 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 ADSSP30520 456 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 LSP1P33241 339 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 MAP2K1Q02750 393 aaPredicted RBP11.8□□□□□ -0.52
LIN54-207ENST00000508171 FKBP1CQ5VVH2 108 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 CBWD2Q8IUF1 395 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 RTKN2Q8IZC4 609 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 SEC14L1Q92503 715 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 CCDC127Q96BQ5 260 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 UTP11Q9Y3A2 253 aaKnown RBP11.8□□□□□ -0.52
LIN54-207ENST00000508171 WDR81Q562E7 1941 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 MYO1FO00160 1098 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 CYP26A1O43174 497 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 ATMINO43313 823 aaPredicted RBP11.8□□□□□ -0.52
LIN54-207ENST00000508171 CCNE2O96020 404 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 EGFRP00533 1210 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 CHRNB2P17787 502 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 SEC24CP53992 1094 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 SOX10P56693 466 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 MAP3K10Q02779 954 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 DHX9Q08211 1270 aaKnown RBP11.8□□□□□ -0.52
LIN54-207ENST00000508171 CETN1Q12798 172 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 RASA3Q14644 834 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 PGM5Q15124 567 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 FAM102BQ5T8I3 360 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 EMC10Q5UCC4 262 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 TMC3Q7Z5M5 1100 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 SLC47A2Q86VL8 602 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 CPNE8Q86YQ8 564 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 PPM1KQ8N3J5 372 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 SEMA4DQ92854 862 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 LRRC45Q96CN5 670 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 SAAL1Q96ER3 474 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 PSMD1Q99460 953 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 CARD9Q9H257 536 aa11.8□□□□□ -0.52
LIN54-207ENST00000508171 BCCIPQ9P287 314 aaKnown RBP eCLIP11.8□□□□□ -0.52
LIN54-207ENST00000508171 FER1L6Q2WGJ9 1857 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 HMGB1P1B2RPK0 211 aaPredicted RBP11.79□□□□□ -0.52
LIN54-207ENST00000508171 NDUFAB1O14561 156 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 MYZAPP0CAP1 466 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 MAPTP10636 758 aaKnown RBP11.79□□□□□ -0.52
LIN54-207ENST00000508171 VCAM1P19320 739 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 KCNA3P22001 575 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 PTENP60484 403 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 EN1Q05925 392 aaPredicted RBP11.79□□□□□ -0.52
LIN54-207ENST00000508171 CXCL9Q07325 125 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 XKR9Q5GH70 373 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 NIPA1Q7RTP0 329 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 NOP9Q86U38 636 aaKnown RBP11.79□□□□□ -0.52
LIN54-207ENST00000508171 MCF2L2Q86YR7 1114 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 ZDHHC14Q8IZN3 488 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 ATP8B4Q8TF62 1192 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 KREMEN1Q96MU8 473 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 TSPYL1Q9H0U9 437 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 SLC38A10Q9HBR0 1119 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 ZNFX1Q9P2E3 1918 aaKnown RBP11.79□□□□□ -0.52
LIN54-207ENST00000508171 GOLGA6L10A6NI86 522 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 CCDC169A6NNP5 214 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 RFX1P22670 979 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 MDH1P40925 334 aaKnown RBP11.79□□□□□ -0.52
LIN54-207ENST00000508171 MXI1P50539 228 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 DR1Q01658 176 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 MESDQ14696 234 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 LRIG3Q6UXM1 1119 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 C12orf56Q8IXR9 622 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 EPS8L1Q8TE68 723 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 WNK4Q96J92 1243 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 BTBD6Q96KE9 485 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 ZNRF3Q9ULT6 936 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 FAM169AQ9Y6X4 670 aa11.79□□□□□ -0.52
LIN54-207ENST00000508171 TESPA1A2RU30 521 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms