RNA–Protein interactions for RNA: ENST00000504956.5

AFF1-205, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-205ENST00000504956 AGPAT5Q9NUQ2 364 aa17.44■□□□□ 0.38
AFF1-205ENST00000504956 KCNG1Q9UIX4 513 aa17.44■□□□□ 0.38
AFF1-205ENST00000504956 TRIP11Q15643 1979 aa17.44■□□□□ 0.38
AFF1-205ENST00000504956 MBD3O95983 291 aa17.43■□□□□ 0.38
AFF1-205ENST00000504956 FGBP02675 491 aa17.43■□□□□ 0.38
AFF1-205ENST00000504956 ZNF720Q7Z2F6 126 aa17.43■□□□□ 0.38
AFF1-205ENST00000504956 LINC01599Q8WXQ3 324 aa17.43■□□□□ 0.38
AFF1-205ENST00000504956 UBE2OQ9C0C9 1292 aaKnown RBP17.43■□□□□ 0.38
AFF1-205ENST00000504956 CLSTN2Q9H4D0 955 aa17.43■□□□□ 0.38
AFF1-205ENST00000504956 TMEM134Q9H6X4 195 aa17.43■□□□□ 0.38
AFF1-205ENST00000504956 SLC39A2Q9NP94 309 aa17.43■□□□□ 0.38
AFF1-205ENST00000504956 H0YCG3 227 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 ACTN1P12814 892 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 ARF4P18085 180 aaPredicted RBP17.42■□□□□ 0.38
AFF1-205ENST00000504956 IBSPP21815 317 aaPredicted RBP17.42■□□□□ 0.38
AFF1-205ENST00000504956 PRPF4BQ13523 1007 aaKnown RBP17.42■□□□□ 0.38
AFF1-205ENST00000504956 IKBKEQ14164 716 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 FAM187BQ17R55 369 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 TMEM132AQ24JP5 1023 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 C9orf50Q5SZB4 431 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 PPP4R3CPQ6ZMV5 832 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 CDR2LQ86X02 465 aaPredicted RBP17.42■□□□□ 0.38
AFF1-205ENST00000504956 ELOA2Q8IYF1 753 aaPredicted RBP17.42■□□□□ 0.38
AFF1-205ENST00000504956 PRIMPOLQ96LW4 560 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 PCDHA5Q9Y5H7 936 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 CITO14578 2027 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 CNTNAP2Q9UHC6 1331 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 ZBBXA8MT70 800 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 ACKR2O00590 384 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 HOXA11P31270 313 aaPredicted RBP17.42■□□□□ 0.38
AFF1-205ENST00000504956 STRN3Q13033 797 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 SLC17A8Q8NDX2 589 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 SMARCE1Q969G3 411 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 CCDC47Q96A33 483 aaKnown RBP17.42■□□□□ 0.38
AFF1-205ENST00000504956 ADAM2Q99965 735 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 FTHL17Q9BXU8 183 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 NUP62CLQ9H1M0 184 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 TBX20Q9UMR3 447 aa17.42■□□□□ 0.38
AFF1-205ENST00000504956 PPP1R37O75864 691 aa17.41■□□□□ 0.38
AFF1-205ENST00000504956 PRPF6O94906 941 aaKnown RBP17.41■□□□□ 0.38
AFF1-205ENST00000504956 SMC2O95347 1197 aa17.41■□□□□ 0.38
AFF1-205ENST00000504956 ZSCAN20P17040 1043 aaPredicted RBP17.41■□□□□ 0.38
AFF1-205ENST00000504956 GTF2BQ00403 316 aa17.41■□□□□ 0.38
AFF1-205ENST00000504956 KCNA1Q09470 495 aa17.41■□□□□ 0.38
AFF1-205ENST00000504956 STK4Q13043 487 aa17.41■□□□□ 0.38
AFF1-205ENST00000504956 DSC3Q14574 896 aa17.41■□□□□ 0.38
AFF1-205ENST00000504956 PCBP1Q15365 356 aaKnown RBP eCLIP17.41■□□□□ 0.38
AFF1-205ENST00000504956 NT5DC1Q5TFE4 455 aa17.41■□□□□ 0.38
AFF1-205ENST00000504956 TWF2Q6IBS0 349 aaKnown RBP17.41■□□□□ 0.38
AFF1-205ENST00000504956 CHRDL2Q6WN34 429 aa17.41■□□□□ 0.38
AFF1-205ENST00000504956 RTN4RL1Q86UN2 441 aaPredicted RBP17.41■□□□□ 0.38
AFF1-205ENST00000504956 KIAA0895Q8NCT3 520 aa17.41■□□□□ 0.38
AFF1-205ENST00000504956 ST6GALNAC4Q9H4F1 302 aa17.41■□□□□ 0.38
AFF1-205ENST00000504956 CXXC1Q9P0U4 656 aaPredicted RBP17.41■□□□□ 0.38
AFF1-205ENST00000504956 FNDC1Q4ZHG4 1894 aaPredicted RBP17.41■□□□□ 0.38
AFF1-205ENST00000504956 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.4■□□□□ 0.38
AFF1-205ENST00000504956 BAIAP3O94812 1187 aa17.4■□□□□ 0.38
AFF1-205ENST00000504956 RHOBTB3O94955 611 aa17.4■□□□□ 0.38
AFF1-205ENST00000504956 WDR5P61964 334 aaKnown RBP17.4■□□□□ 0.38
AFF1-205ENST00000504956 NCBP1Q09161 790 aaKnown RBP17.4■□□□□ 0.38
AFF1-205ENST00000504956 KCNB1Q14721 858 aa17.4■□□□□ 0.38
AFF1-205ENST00000504956 NOTUMQ6P988 496 aa17.4■□□□□ 0.38
AFF1-205ENST00000504956 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.4■□□□□ 0.38
AFF1-205ENST00000504956 BICD1Q96G01 975 aa17.4■□□□□ 0.38
AFF1-205ENST00000504956 TARS2Q9BW92 718 aaKnown RBP17.4■□□□□ 0.38
AFF1-205ENST00000504956 STRA6Q9BX79 667 aa17.4■□□□□ 0.38
AFF1-205ENST00000504956 MRPL4Q9BYD3 311 aaKnown RBP17.4■□□□□ 0.38
AFF1-205ENST00000504956 TSPYL2Q9H2G4 693 aaPredicted RBP17.4■□□□□ 0.38
AFF1-205ENST00000504956 IKZF4Q9H2S9 585 aa17.4■□□□□ 0.38
AFF1-205ENST00000504956 GDAQ9Y2T3 454 aa17.4■□□□□ 0.38
AFF1-205ENST00000504956 LAMA2P24043 3122 aaKnown RBP17.4■□□□□ 0.38
AFF1-205ENST00000504956 ABHD14A-ACY1A0A1B0GW23 586 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 ENPP3O14638 875 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 AXLP30530 894 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 DEFB103AP81534 67 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 SHHQ15465 462 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 L1TD1Q5T7N2 865 aaKnown RBP17.39■□□□□ 0.37
AFF1-205ENST00000504956 ATF7IP2Q5U623 682 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 EEF1DP3Q658K8 133 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 ISM2Q6H9L7 571 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 MAP4K3Q8IVH8 894 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 SPATA20Q8TB22 786 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 HERVK_113Q902F9 699 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 GSDMAQ96QA5 445 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 ACO2Q99798 780 aaKnown RBP17.39■□□□□ 0.37
AFF1-205ENST00000504956 PDZD7Q9H5P4 517 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 CHST12Q9NRB3 414 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 RGS18Q9NS28 235 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 PCDHB13Q9Y5F0 798 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 BIN1O00499 593 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 HNRNPDLO14979 420 aaKnown RBP17.39■□□□□ 0.37
AFF1-205ENST00000504956 KCNJ6P48051 423 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 PSMD2Q13200 908 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 ALCAMQ13740 583 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 EPM2AIP1Q7L775 607 aaPredicted RBP17.39■□□□□ 0.37
AFF1-205ENST00000504956 SMYD4Q8IYR2 804 aaPredicted RBP17.39■□□□□ 0.37
AFF1-205ENST00000504956 KCNN1Q92952 543 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 HVCN1Q96D96 273 aa17.39■□□□□ 0.37
AFF1-205ENST00000504956 RNPC3Q96LT9 517 aaKnown RBP17.39■□□□□ 0.37
AFF1-205ENST00000504956 EIF2AQ9BY44 585 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms