RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 AXLP30530 894 aa27.71■■■□□ 2.03
HMGN1-217ENST00000489072 PPM1AP35813 382 aa27.71■■■□□ 2.03
HMGN1-217ENST00000489072 BCAR1P56945 870 aa27.71■■■□□ 2.03
HMGN1-217ENST00000489072 ATP2C1P98194 919 aaPredicted RBP27.71■■■□□ 2.03
HMGN1-217ENST00000489072 ADAM15Q13444 863 aa27.71■■■□□ 2.03
HMGN1-217ENST00000489072 PTCRAQ6ISU1 281 aaPredicted RBP27.71■■■□□ 2.03
HMGN1-217ENST00000489072 SMG8Q8ND04 991 aaKnown RBP27.71■■■□□ 2.03
HMGN1-217ENST00000489072 MICAL1Q8TDZ2 1067 aa27.71■■■□□ 2.03
HMGN1-217ENST00000489072 RSPH1Q8WYR4 309 aa27.71■■■□□ 2.03
HMGN1-217ENST00000489072 BSNDQ8WZ55 320 aa27.71■■■□□ 2.03
HMGN1-217ENST00000489072 RAB34Q9BZG1 259 aa27.71■■■□□ 2.03
HMGN1-217ENST00000489072 DDX19AQ9NUU7 478 aaKnown RBP27.71■■■□□ 2.03
HMGN1-217ENST00000489072 C5orf42Q9H799 3197 aa27.7■■■□□ 2.03
HMGN1-217ENST00000489072 LRRIQ4A6NIV6 560 aa27.7■■■□□ 2.02
HMGN1-217ENST00000489072 NT5C1B-RDH14C9J2C7 533 aa27.7■■■□□ 2.02
HMGN1-217ENST00000489072 B4GALT5O43286 388 aa27.7■■■□□ 2.02
HMGN1-217ENST00000489072 TBX10O75333 385 aa27.7■■■□□ 2.02
HMGN1-217ENST00000489072 IL9P15248 144 aa27.7■■■□□ 2.02
HMGN1-217ENST00000489072 ARF4P18085 180 aaPredicted RBP27.7■■■□□ 2.02
HMGN1-217ENST00000489072 NRIP1P48552 1158 aa27.7■■■□□ 2.02
HMGN1-217ENST00000489072 AFF1P51825 1210 aaKnown RBP27.7■■■□□ 2.02
HMGN1-217ENST00000489072 NOTUMQ6P988 496 aa27.7■■■□□ 2.02
HMGN1-217ENST00000489072 DTHD1Q6ZMT9 781 aa27.7■■■□□ 2.02
HMGN1-217ENST00000489072 RBM23Q86U06 439 aaKnown RBP27.7■■■□□ 2.02
HMGN1-217ENST00000489072 PPP2R3CQ969Q6 453 aa27.7■■■□□ 2.02
HMGN1-217ENST00000489072 MMTAG2Q9BU76 263 aaKnown RBP27.7■■■□□ 2.02
HMGN1-217ENST00000489072 BHMT2Q9H2M3 363 aa27.7■■■□□ 2.02
HMGN1-217ENST00000489072 NRDE2Q9H7Z3 1164 aa27.7■■■□□ 2.02
HMGN1-217ENST00000489072 GRXCR2A6NFK2 248 aa27.69■■■□□ 2.02
HMGN1-217ENST00000489072 B4GALT3O60512 393 aa27.69■■■□□ 2.02
HMGN1-217ENST00000489072 NCLP19338 710 aaKnown RBP27.69■■■□□ 2.02
HMGN1-217ENST00000489072 CDCA2Q69YH5 1023 aaPredicted RBP27.69■■■□□ 2.02
HMGN1-217ENST00000489072 CCDC51Q96ER9 411 aa27.69■■■□□ 2.02
HMGN1-217ENST00000489072 CSRNP2Q9H175 543 aa27.69■■■□□ 2.02
HMGN1-217ENST00000489072 RSAD1Q9HA92 442 aa27.69■■■□□ 2.02
HMGN1-217ENST00000489072 POLD4Q9HCU8 107 aa27.69■■■□□ 2.02
HMGN1-217ENST00000489072 IPPQ9Y573 584 aa27.69■■■□□ 2.02
HMGN1-217ENST00000489072 STK24Q9Y6E0 443 aa27.69■■■□□ 2.02
HMGN1-217ENST00000489072 ZC3H11AO75152 810 aaKnown RBP eCLIP27.68■■■□□ 2.02
HMGN1-217ENST00000489072 PLPP4Q5VZY2 271 aa27.68■■■□□ 2.02
HMGN1-217ENST00000489072 TMEM173Q86WV6 379 aaPredicted RBP27.68■■■□□ 2.02
HMGN1-217ENST00000489072 EFHBQ8N7U6 833 aa27.68■■■□□ 2.02
HMGN1-217ENST00000489072 RNF39Q9H2S5 420 aa27.68■■■□□ 2.02
HMGN1-217ENST00000489072 PUF60Q9UHX1 559 aaKnown RBP27.68■■■□□ 2.02
HMGN1-217ENST00000489072 CNTNAP2Q9UHC6 1331 aa27.67■■■□□ 2.02
HMGN1-217ENST00000489072 E9PMD0 336 aa27.67■■■□□ 2.02
HMGN1-217ENST00000489072 PER2O15055 1255 aa27.67■■■□□ 2.02
HMGN1-217ENST00000489072 ALDH7A1P49419 539 aaKnown RBP27.67■■■□□ 2.02
HMGN1-217ENST00000489072 NCBP1Q09161 790 aaKnown RBP27.67■■■□□ 2.02
HMGN1-217ENST00000489072 CLUL1Q15846 466 aa27.67■■■□□ 2.02
HMGN1-217ENST00000489072 KRT79Q5XKE5 535 aa27.67■■■□□ 2.02
HMGN1-217ENST00000489072 PDE12Q6L8Q7 609 aaKnown RBP27.67■■■□□ 2.02
HMGN1-217ENST00000489072 CDR2LQ86X02 465 aaPredicted RBP27.67■■■□□ 2.02
HMGN1-217ENST00000489072 ZNF280BQ86YH2 543 aa27.67■■■□□ 2.02
HMGN1-217ENST00000489072 TCF25Q9BQ70 676 aa27.67■■■□□ 2.02
HMGN1-217ENST00000489072 TLE6Q9H808 572 aa27.67■■■□□ 2.02
HMGN1-217ENST00000489072 DNAJB4Q9UDY4 337 aa27.67■■■□□ 2.02
HMGN1-217ENST00000489072 HES2Q9Y543 173 aa27.67■■■□□ 2.02
HMGN1-217ENST00000489072 GLP2RO95838 553 aa27.66■■■□□ 2.02
HMGN1-217ENST00000489072 ITGA4P13612 1032 aa27.66■■■□□ 2.02
HMGN1-217ENST00000489072 KRT17Q04695 432 aa27.66■■■□□ 2.02
HMGN1-217ENST00000489072 RNASELQ05823 741 aaKnown RBP27.66■■■□□ 2.02
HMGN1-217ENST00000489072 PUS10Q3MIT2 529 aaKnown RBP27.66■■■□□ 2.02
HMGN1-217ENST00000489072 PPP4R3CPQ6ZMV5 832 aa27.66■■■□□ 2.02
HMGN1-217ENST00000489072 KCNK18Q7Z418 384 aa27.66■■■□□ 2.02
HMGN1-217ENST00000489072 CNNM3Q8NE01 707 aa27.66■■■□□ 2.02
HMGN1-217ENST00000489072 BCL7CQ8WUZ0 217 aaPredicted RBP27.66■■■□□ 2.02
HMGN1-217ENST00000489072 GBP3Q9H0R5 595 aa27.66■■■□□ 2.02
HMGN1-217ENST00000489072 ENTPD7Q9NQZ7 604 aa27.66■■■□□ 2.02
HMGN1-217ENST00000489072 CLEC1BQ9P126 229 aa27.66■■■□□ 2.02
HMGN1-217ENST00000489072 TTLL13PA6NNM8 815 aa27.65■■■□□ 2.02
HMGN1-217ENST00000489072 DDHD2O94830 711 aa27.65■■■□□ 2.02
HMGN1-217ENST00000489072 EYA4O95677 639 aa27.65■■■□□ 2.02
HMGN1-217ENST00000489072 GALTP07902 379 aa27.65■■■□□ 2.02
HMGN1-217ENST00000489072 FAM178BQ8IXR5 827 aa27.65■■■□□ 2.02
HMGN1-217ENST00000489072 URGCPQ8TCY9 931 aa27.65■■■□□ 2.02
HMGN1-217ENST00000489072 FZD8Q9H461 694 aa27.65■■■□□ 2.02
HMGN1-217ENST00000489072 CD320Q9NPF0 282 aa27.65■■■□□ 2.02
HMGN1-217ENST00000489072 A0A1B0GUA9 196 aa27.64■■■□□ 2.02
HMGN1-217ENST00000489072 VWA3AA6NCI4 1184 aa27.64■■■□□ 2.02
HMGN1-217ENST00000489072 HIDE1A8MVS5 230 aa27.64■■■□□ 2.02
HMGN1-217ENST00000489072 NAMPTP43490 491 aa27.64■■■□□ 2.02
HMGN1-217ENST00000489072 SLC11A1P49279 550 aa27.64■■■□□ 2.02
HMGN1-217ENST00000489072 NDUFV1P49821 464 aa27.64■■■□□ 2.02
HMGN1-217ENST00000489072 RBM10P98175 930 aaKnown RBP27.64■■■□□ 2.02
HMGN1-217ENST00000489072 DUSP6Q16828 381 aa27.64■■■□□ 2.02
HMGN1-217ENST00000489072 FAM187BQ17R55 369 aa27.64■■■□□ 2.02
HMGN1-217ENST00000489072 ZBTB8OSQ8IWT0 167 aa27.64■■■□□ 2.02
HMGN1-217ENST00000489072 VN1R2Q8NFZ6 395 aa27.64■■■□□ 2.02
HMGN1-217ENST00000489072 MSLNLQ96KJ4 702 aa27.64■■■□□ 2.02
HMGN1-217ENST00000489072 NXF3Q9H4D5 531 aaKnown RBP27.64■■■□□ 2.02
HMGN1-217ENST00000489072 NGRNQ9NPE2 291 aaKnown RBP27.64■■■□□ 2.02
HMGN1-217ENST00000489072 PRMT7Q9NVM4 692 aaPredicted RBP27.64■■■□□ 2.02
HMGN1-217ENST00000489072 DNM3Q9UQ16 869 aa27.64■■■□□ 2.02
HMGN1-217ENST00000489072 TDRD15B5MCY1 1934 aaKnown RBP27.64■■■□□ 2.02
HMGN1-217ENST00000489072 NPTXRO95502 500 aa27.63■■■□□ 2.01
HMGN1-217ENST00000489072 POMCP01189 267 aa27.63■■■□□ 2.01
HMGN1-217ENST00000489072 ARL6IP4Q66PJ3 421 aaKnown RBP27.63■■■□□ 2.01
HMGN1-217ENST00000489072 SLC27A1Q6PCB7 646 aa27.63■■■□□ 2.01
HMGN1-217ENST00000489072 TMC7Q7Z402 723 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms