RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 ESRP1Q6NXG1 681 aaKnown RBP4.45□□□□□ -1.7
CD46-215ENST00000488596 RTN4RL1Q86UN2 441 aaPredicted RBP4.45□□□□□ -1.7
CD46-215ENST00000488596 SPATS2Q86XZ4 545 aaKnown RBP4.45□□□□□ -1.7
CD46-215ENST00000488596 ANKRD35Q8N283 1001 aa4.45□□□□□ -1.7
CD46-215ENST00000488596 CNTD1Q8N815 330 aa4.45□□□□□ -1.7
CD46-215ENST00000488596 CLRN3Q8NCR9 226 aa4.45□□□□□ -1.7
CD46-215ENST00000488596 CALML6Q8TD86 181 aa4.45□□□□□ -1.7
CD46-215ENST00000488596 MIEF2Q96C03 454 aa4.45□□□□□ -1.7
CD46-215ENST00000488596 RPL10LQ96L21 214 aaKnown RBP4.45□□□□□ -1.7
CD46-215ENST00000488596 ZMAT4Q9H898 229 aa4.45□□□□□ -1.7
CD46-215ENST00000488596 APOBEC2Q9Y235 224 aaKnown RBP4.45□□□□□ -1.7
CD46-215ENST00000488596 VWA7Q9Y334 891 aa4.45□□□□□ -1.7
CD46-215ENST00000488596 PCSK5Q92824 1860 aa4.44□□□□□ -1.7
CD46-215ENST00000488596 ALG1L2C9J202 215 aa4.44□□□□□ -1.7
CD46-215ENST00000488596 RAB11FIP3O75154 756 aa4.44□□□□□ -1.7
CD46-215ENST00000488596 PDGFRBP09619 1106 aa4.44□□□□□ -1.7
CD46-215ENST00000488596 LSP1P33241 339 aa4.44□□□□□ -1.7
CD46-215ENST00000488596 ALDH6A1Q02252 535 aaKnown RBP4.44□□□□□ -1.7
CD46-215ENST00000488596 FSTL1Q12841 308 aa4.44□□□□□ -1.7
CD46-215ENST00000488596 TOB2Q14106 344 aaPredicted RBP4.44□□□□□ -1.7
CD46-215ENST00000488596 LRCH2Q5VUJ6 765 aa4.44□□□□□ -1.7
CD46-215ENST00000488596 KLHDC10Q6PID8 442 aa4.44□□□□□ -1.7
CD46-215ENST00000488596 GAREM2Q75VX8 874 aa4.44□□□□□ -1.7
CD46-215ENST00000488596 ANKRD53Q8N9V6 530 aa4.44□□□□□ -1.7
CD46-215ENST00000488596 ZNF496Q96IT1 587 aaPredicted RBP4.44□□□□□ -1.7
CD46-215ENST00000488596 C16orf92Q96LL3 132 aa4.44□□□□□ -1.7
CD46-215ENST00000488596 SLC6A15Q9H2J7 730 aa4.44□□□□□ -1.7
CD46-215ENST00000488596 TOPORSQ9NS56 1045 aaPredicted RBP4.44□□□□□ -1.7
CD46-215ENST00000488596 NOC2LQ9Y3T9 749 aaKnown RBP4.44□□□□□ -1.7
CD46-215ENST00000488596 RBM8AQ9Y5S9 174 aaKnown RBP4.44□□□□□ -1.7
CD46-215ENST00000488596 XDHP47989 1333 aa4.44□□□□□ -1.7
CD46-215ENST00000488596 H2AFYO75367 372 aaKnown RBP4.43□□□□□ -1.7
CD46-215ENST00000488596 ULK1O75385 1050 aa4.43□□□□□ -1.7
CD46-215ENST00000488596 HSP90B1P14625 803 aaKnown RBP4.43□□□□□ -1.7
CD46-215ENST00000488596 SCAND1P57086 179 aa4.43□□□□□ -1.7
CD46-215ENST00000488596 MAP3K12Q12852 859 aa4.43□□□□□ -1.7
CD46-215ENST00000488596 CNGB1Q14028 1251 aaPredicted RBP4.43□□□□□ -1.7
CD46-215ENST00000488596 PDCD1Q15116 288 aa4.43□□□□□ -1.7
CD46-215ENST00000488596 LAIR1Q6GTX8 287 aa4.43□□□□□ -1.7
CD46-215ENST00000488596 RASSF3Q86WH2 238 aa4.43□□□□□ -1.7
CD46-215ENST00000488596 GSPT2Q8IYD1 628 aaKnown RBP4.43□□□□□ -1.7
CD46-215ENST00000488596 ZNF610Q8N9Z0 462 aa4.43□□□□□ -1.7
CD46-215ENST00000488596 LPPQ93052 612 aa4.43□□□□□ -1.7
CD46-215ENST00000488596 SLC7A6OSQ96CW6 309 aaPredicted RBP4.43□□□□□ -1.7
CD46-215ENST00000488596 MTMR8Q96EF0 704 aa4.43□□□□□ -1.7
CD46-215ENST00000488596 TUBGCP5Q96RT8 1024 aa4.43□□□□□ -1.7
CD46-215ENST00000488596 ANO3Q9BYT9 981 aa4.43□□□□□ -1.7
CD46-215ENST00000488596 SAE1Q9UBE0 346 aaPredicted RBP4.43□□□□□ -1.7
CD46-215ENST00000488596 MSRAQ9UJ68 235 aa4.43□□□□□ -1.7
CD46-215ENST00000488596 DENND2AQ9ULE3 1009 aa4.43□□□□□ -1.7
CD46-215ENST00000488596 UBE2QL1A1L167 161 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 GOLGA8AA7E2F4 631 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 GOLGA8BA8MQT2 603 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 FAM20BO75063 409 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 APOL3O95236 402 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 CD40P25942 277 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 FNTBP49356 437 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 MAN2A2P49641 1150 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 RGS3P49796 1198 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 SESN3P58005 492 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 BPIFB4P59827 614 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 PHC1P78364 1004 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 SLC6A3Q01959 620 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 LRRC32Q14392 662 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 EPHA7Q15375 998 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 ELAVL1Q15717 326 aaKnown RBP4.42□□□□□ -1.7
CD46-215ENST00000488596 PLEKHG6Q3KR16 790 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 DPY19L2P1Q6NXN4 242 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 FAM111BQ6SJ93 734 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 NECAB2Q7Z6G3 386 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 MRGPREQ86SM8 312 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 GPR150Q8NGU9 434 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 GFM2Q969S9 779 aaKnown RBP4.42□□□□□ -1.7
CD46-215ENST00000488596 AHCYL2Q96HN2 611 aaKnown RBP4.42□□□□□ -1.7
CD46-215ENST00000488596 SMAD5Q99717 465 aaKnown RBP4.42□□□□□ -1.7
CD46-215ENST00000488596 FOXB1Q99853 325 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 GPR87Q9BY21 358 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 ASPSCR1Q9BZE9 553 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 PUS7LQ9H0K6 701 aaKnown RBP4.42□□□□□ -1.7
CD46-215ENST00000488596 NRDE2Q9H7Z3 1164 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 C14orf119Q9NWQ9 140 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 TRHDEQ9UKU6 1024 aa4.42□□□□□ -1.7
CD46-215ENST00000488596 UBA6A0AVT1 1052 aaPredicted RBP4.41□□□□□ -1.7
CD46-215ENST00000488596 TMEM191CA6NGB0 347 aa4.41□□□□□ -1.7
CD46-215ENST00000488596 ELL2O00472 640 aaPredicted RBP4.41□□□□□ -1.7
CD46-215ENST00000488596 CLEC2LP0C7M8 214 aa4.41□□□□□ -1.7
CD46-215ENST00000488596 BMP5P22003 454 aa4.41□□□□□ -1.7
CD46-215ENST00000488596 PROZP22891 400 aa4.41□□□□□ -1.7
CD46-215ENST00000488596 RABGGTBP53611 331 aa4.41□□□□□ -1.7
CD46-215ENST00000488596 SESN2P58004 480 aaPredicted RBP4.41□□□□□ -1.7
CD46-215ENST00000488596 ERVK-21P61565 698 aa4.41□□□□□ -1.7
CD46-215ENST00000488596 EXOSC10Q01780 885 aaKnown RBP4.41□□□□□ -1.7
CD46-215ENST00000488596 TCIRG1Q13488 830 aa4.41□□□□□ -1.7
CD46-215ENST00000488596 CT83Q5H943 113 aa4.41□□□□□ -1.7
CD46-215ENST00000488596 GPR158Q5T848 1215 aa4.41□□□□□ -1.7
CD46-215ENST00000488596 MBNL2Q5VZF2 373 aaKnown RBP4.41□□□□□ -1.7
CD46-215ENST00000488596 UNQ6494/PRO21346Q6UXR6 183 aa4.41□□□□□ -1.7
CD46-215ENST00000488596 FRMD7Q6ZUT3 714 aa4.41□□□□□ -1.7
CD46-215ENST00000488596 ZZZ3Q8IYH5 903 aa4.41□□□□□ -1.7
CD46-215ENST00000488596 TGFBRAP1Q8WUH2 860 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms