RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 SCYL3Q8IZE3 742 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 LMO3Q8TAP4 145 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 ATP6V1G3Q96LB4 118 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 HACL1Q9UJ83 578 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 ZNF112Q9UJU3 913 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 KRIT1O00522 736 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 TRIM66O15016 1216 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 DKC1O60832 514 aaKnown RBP eCLIP28.25■■■□□ 2.115e-8■■□□□ 14.4
HLA-C-208ENST00000487245 EGFRP00533 1210 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 TNFAIP3P21580 790 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 OAZ1P54368 228 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 HADHBP55084 474 aaKnown RBP28.25■■■□□ 2.11
HLA-C-208ENST00000487245 BACE1P56817 501 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 MCCD1P59942 119 aaPredicted RBP28.25■■■□□ 2.11
HLA-C-208ENST00000487245 ZNF746Q6NUN9 644 aaPredicted RBP28.25■■■□□ 2.11
HLA-C-208ENST00000487245 MAATS1Q7Z4T9 603 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 NLRX1Q86UT6 975 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 DNAAF5Q86Y56 855 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 C10orf67Q8IYJ2 551 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 RDH13Q8NBN7 331 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 CCDC26Q8TAB7 109 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 GPRASP2Q96D09 838 aa28.25■■■□□ 2.11
HLA-C-208ENST00000487245 SRRM3A6NNA2 597 aaPredicted RBP28.24■■■□□ 2.11
HLA-C-208ENST00000487245 NFKBIEO00221 500 aa28.24■■■□□ 2.11
HLA-C-208ENST00000487245 GMPSP49915 693 aaPredicted RBP28.24■■■□□ 2.11
HLA-C-208ENST00000487245 SPP2Q13103 211 aa28.24■■■□□ 2.11
HLA-C-208ENST00000487245 PPP2R5EQ16537 467 aa28.24■■■□□ 2.11
HLA-C-208ENST00000487245 NSMFQ6X4W1 530 aa28.24■■■□□ 2.11
HLA-C-208ENST00000487245 GLYCTKQ8IVS8 523 aa28.24■■■□□ 2.11
HLA-C-208ENST00000487245 MAF1Q9H063 256 aa28.24■■■□□ 2.11
HLA-C-208ENST00000487245 RNF146Q9NTX7 359 aa28.24■■■□□ 2.11
HLA-C-208ENST00000487245 HSPBP1Q9NZL4 362 aa28.24■■■□□ 2.11
HLA-C-208ENST00000487245 USP20Q9Y2K6 914 aa28.24■■■□□ 2.11
HLA-C-208ENST00000487245 EMSYQ7Z589 1322 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 DOCK1Q14185 1865 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 BACH1O14867 736 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 CLUL1Q15846 466 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 XKR9Q5GH70 373 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 SLC35G2Q8TBE7 412 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 CTNNBL1Q8WYA6 563 aaPredicted RBP28.23■■■□□ 2.11
HLA-C-208ENST00000487245 PCIF1Q9H4Z3 704 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 CNOT7Q9UIV1 285 aaKnown RBP28.23■■■□□ 2.11
HLA-C-208ENST00000487245 PLAAQ9Y263 795 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 DDX3YO15523 660 aaKnown RBP28.23■■■□□ 2.11
HLA-C-208ENST00000487245 BUB1BO60566 1050 aaPredicted RBP28.23■■■□□ 2.11
HLA-C-208ENST00000487245 SMTNP53814 917 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 DGKZQ13574 1117 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 VSIG10LQ86VR7 867 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 BCAS4Q8TDM0 211 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 ATG4CQ96DT6 458 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 AP1M1Q9BXS5 423 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 PLEKHA4Q9H4M7 779 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 TMBIM4Q9HC24 238 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 PICK1Q9NRD5 415 aa28.23■■■□□ 2.11
HLA-C-208ENST00000487245 ANKRD62A6NC57 917 aa28.22■■■□□ 2.11
HLA-C-208ENST00000487245 ATP9AO75110 1047 aa28.22■■■□□ 2.11
HLA-C-208ENST00000487245 POU5F1Q01860 360 aaKnown RBP28.22■■■□□ 2.11
HLA-C-208ENST00000487245 MTMR3Q13615 1198 aa28.22■■■□□ 2.11
HLA-C-208ENST00000487245 HLTFQ14527 1009 aaKnown RBP eCLIP28.22■■■□□ 2.11
HLA-C-208ENST00000487245 UGCGQ16739 394 aa28.22■■■□□ 2.11
HLA-C-208ENST00000487245 NBPF12Q5TAG4 269 aaPredicted RBP28.22■■■□□ 2.11
HLA-C-208ENST00000487245 PHLDB3Q6NSJ2 640 aa28.22■■■□□ 2.11
HLA-C-208ENST00000487245 OTUD6AQ7L8S5 288 aa28.22■■■□□ 2.11
HLA-C-208ENST00000487245 ZNF280CQ8ND82 737 aa28.22■■■□□ 2.11
HLA-C-208ENST00000487245 C12orf42Q96LP6 360 aa28.22■■■□□ 2.11
HLA-C-208ENST00000487245 MOV10L1Q9BXT6 1211 aaKnown RBP28.22■■■□□ 2.11
HLA-C-208ENST00000487245 LTBP3Q9NS15 1303 aa28.22■■■□□ 2.11
HLA-C-208ENST00000487245 TESPA1A2RU30 521 aaPredicted RBP28.21■■■□□ 2.11
HLA-C-208ENST00000487245 H0YGN5 161 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 EBAG9O00559 213 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 CCNE2O96020 404 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 PEX3P56589 373 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 BAATQ14032 418 aaPredicted RBP28.21■■■□□ 2.11
HLA-C-208ENST00000487245 EPC2Q52LR7 807 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 CBWD1Q9BRT8 395 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 DDX47Q9H0S4 455 aaKnown RBP28.21■■■□□ 2.11
HLA-C-208ENST00000487245 CARD9Q9H257 536 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 C17orf75Q9HAS0 396 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 FAM114A2Q9NRY5 505 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 PCDHA10Q9Y5I2 948 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 NFS1Q9Y697 457 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 NR1D1P20393 614 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 HSD17B3P37058 310 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 ARHGAP44Q17R89 818 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 SAMD7Q7Z3H4 446 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 EFCAB13Q8IY85 973 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 SH2D3CQ8N5H7 860 aa28.21■■■□□ 2.11
HLA-C-208ENST00000487245 C19orf81C9J6K1 198 aa28.2■■■□□ 2.1
HLA-C-208ENST00000487245 SLC16A4O15374 487 aa28.2■■■□□ 2.1
HLA-C-208ENST00000487245 CCT5P48643 541 aa28.2■■■□□ 2.1
HLA-C-208ENST00000487245 TBC1D10BQ4KMP7 808 aaPredicted RBP28.2■■■□□ 2.1
HLA-C-208ENST00000487245 FAM102BQ5T8I3 360 aa28.2■■■□□ 2.1
HLA-C-208ENST00000487245 NAP1L3Q99457 506 aaPredicted RBP28.2■■■□□ 2.1
HLA-C-208ENST00000487245 AGPAT1Q99943 283 aa28.2■■■□□ 2.1
HLA-C-208ENST00000487245 UBE2TQ9NPD8 197 aaPredicted RBP28.2■■■□□ 2.1
HLA-C-208ENST00000487245 ATXN2Q99700 1313 aaKnown RBP28.2■■■□□ 2.1
HLA-C-208ENST00000487245 PARP14Q460N5 1801 aa28.2■■■□□ 2.1
HLA-C-208ENST00000487245 NR3C2P08235 984 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 SPDYCQ5MJ68 293 aa28.19■■■□□ 2.1
HLA-C-208ENST00000487245 REPS2Q8NFH8 660 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms