RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 IL17AQ16552 155 aa15.37■□□□□ 0.05
VARS-225ENST00000482996 LEXMQ3ZCV2 418 aa15.37■□□□□ 0.05
VARS-225ENST00000482996 UBXN11Q5T124 520 aa15.37■□□□□ 0.05
VARS-225ENST00000482996 PDE12Q6L8Q7 609 aaKnown RBP15.37■□□□□ 0.05
VARS-225ENST00000482996 HACE1Q8IYU2 909 aa15.37■□□□□ 0.05
VARS-225ENST00000482996 MRPS27Q92552 414 aaKnown RBP15.37■□□□□ 0.05
VARS-225ENST00000482996 KIFAP3Q92845 792 aa15.37■□□□□ 0.05
VARS-225ENST00000482996 INTS4Q96HW7 963 aaKnown RBP15.37■□□□□ 0.05
VARS-225ENST00000482996 IFT74Q96LB3 600 aa15.37■□□□□ 0.05
VARS-225ENST00000482996 TRIM6Q9C030 488 aaPredicted RBP15.37■□□□□ 0.05
VARS-225ENST00000482996 CSRNP2Q9H175 543 aa15.37■□□□□ 0.05
VARS-225ENST00000482996 RSAD1Q9HA92 442 aa15.37■□□□□ 0.05
VARS-225ENST00000482996 UBN1Q9NPG3 1134 aa15.37■□□□□ 0.05
VARS-225ENST00000482996 PRMT7Q9NVM4 692 aaPredicted RBP15.37■□□□□ 0.05
VARS-225ENST00000482996 CLDND1Q9NY35 253 aa15.37■□□□□ 0.05
VARS-225ENST00000482996 VWA3AA6NCI4 1184 aa15.36■□□□□ 0.05
VARS-225ENST00000482996 K7ELQ4 463 aaPredicted RBP15.36■□□□□ 0.05
VARS-225ENST00000482996 OFD1O75665 1012 aa15.36■□□□□ 0.05
VARS-225ENST00000482996 ITGA4P13612 1032 aa15.36■□□□□ 0.05
VARS-225ENST00000482996 ARF4P18085 180 aaPredicted RBP15.36■□□□□ 0.05
VARS-225ENST00000482996 NCLP19338 710 aaKnown RBP15.36■□□□□ 0.05
VARS-225ENST00000482996 CDC25AP30304 524 aa15.36■□□□□ 0.05
VARS-225ENST00000482996 IRS1P35568 1242 aa15.36■□□□□ 0.05
VARS-225ENST00000482996 COL19A1Q14993 1142 aa15.36■□□□□ 0.05
VARS-225ENST00000482996 ZRSR1Q15695 479 aaKnown RBP15.36■□□□□ 0.05
VARS-225ENST00000482996 AMHR2Q16671 573 aa15.36■□□□□ 0.05
VARS-225ENST00000482996 PUS10Q3MIT2 529 aaKnown RBP15.36■□□□□ 0.05
VARS-225ENST00000482996 CDCA2Q69YH5 1023 aaPredicted RBP15.36■□□□□ 0.05
VARS-225ENST00000482996 AGMOQ6ZNB7 445 aa15.36■□□□□ 0.05
VARS-225ENST00000482996 DEPTORQ8TB45 409 aa15.36■□□□□ 0.05
VARS-225ENST00000482996 CPB2Q96IY4 423 aa15.36■□□□□ 0.05
VARS-225ENST00000482996 CDK5RAP3Q96JB5 506 aa15.36■□□□□ 0.05
VARS-225ENST00000482996 PRIMPOLQ96LW4 560 aa15.36■□□□□ 0.05
VARS-225ENST00000482996 IGFLR1Q9H665 355 aa15.36■□□□□ 0.05
VARS-225ENST00000482996 TBC1D13Q9NVG8 400 aa15.36■□□□□ 0.05
VARS-225ENST00000482996 KANSL3Q9P2N6 904 aa15.36■□□□□ 0.05
VARS-225ENST00000482996 MEIS3P2A8K0S8 358 aa15.35■□□□□ 0.05
VARS-225ENST00000482996 ZC3H11AO75152 810 aaKnown RBP eCLIP15.35■□□□□ 0.05
VARS-225ENST00000482996 PBX3P40426 434 aa15.35■□□□□ 0.05
VARS-225ENST00000482996 NAMPTP43490 491 aa15.35■□□□□ 0.05
VARS-225ENST00000482996 BCAR1P56945 870 aa15.35■□□□□ 0.05
VARS-225ENST00000482996 TMEM132AQ24JP5 1023 aa15.35■□□□□ 0.05
VARS-225ENST00000482996 PPP4R3CPQ6ZMV5 832 aa15.35■□□□□ 0.05
VARS-225ENST00000482996 SLC39A11Q8N1S5 342 aa15.35■□□□□ 0.05
VARS-225ENST00000482996 KCTD17Q8N5Z5 321 aa15.35■□□□□ 0.05
VARS-225ENST00000482996 TMEM169Q96HH4 297 aa15.35■□□□□ 0.05
VARS-225ENST00000482996 AK8Q96MA6 479 aa15.35■□□□□ 0.05
VARS-225ENST00000482996 FAM193BQ96PV7 902 aaPredicted RBP15.35■□□□□ 0.05
VARS-225ENST00000482996 MMTAG2Q9BU76 263 aaKnown RBP15.35■□□□□ 0.05
VARS-225ENST00000482996 EIF2AQ9BY44 585 aaKnown RBP15.35■□□□□ 0.05
VARS-225ENST00000482996 NT5C3AQ9H0P0 336 aa15.35■□□□□ 0.05
VARS-225ENST00000482996 TLE6Q9H808 572 aa15.35■□□□□ 0.05
VARS-225ENST00000482996 NGRNQ9NPE2 291 aaKnown RBP15.35■□□□□ 0.05
VARS-225ENST00000482996 ENTPD7Q9NQZ7 604 aa15.35■□□□□ 0.05
VARS-225ENST00000482996 FAM50BQ9Y247 325 aa15.35■□□□□ 0.05
VARS-225ENST00000482996 IPPQ9Y573 584 aa15.35■□□□□ 0.05
VARS-225ENST00000482996 FSD2A1L4K1 749 aa15.34■□□□□ 0.05
VARS-225ENST00000482996 E9PMD0 336 aa15.34■□□□□ 0.05
VARS-225ENST00000482996 H3BQ06 376 aaPredicted RBP15.34■□□□□ 0.05
VARS-225ENST00000482996 SLC26A4O43511 780 aa15.34■□□□□ 0.05
VARS-225ENST00000482996 EFNA5P52803 228 aa15.34■□□□□ 0.05
VARS-225ENST00000482996 BMS1Q14692 1282 aaKnown RBP15.34■□□□□ 0.05
VARS-225ENST00000482996 MAPK6Q16659 721 aa15.34■□□□□ 0.05
VARS-225ENST00000482996 FAM187BQ17R55 369 aa15.34■□□□□ 0.05
VARS-225ENST00000482996 CTC1Q2NKJ3 1217 aa15.34■□□□□ 0.05
VARS-225ENST00000482996 SLC27A1Q6PCB7 646 aa15.34■□□□□ 0.05
VARS-225ENST00000482996 EFHBQ8N7U6 833 aa15.34■□□□□ 0.05
VARS-225ENST00000482996 SMG8Q8ND04 991 aaKnown RBP15.34■□□□□ 0.05
VARS-225ENST00000482996 BSNDQ8WZ55 320 aa15.34■□□□□ 0.05
VARS-225ENST00000482996 GBP3Q9H0R5 595 aa15.34■□□□□ 0.05
VARS-225ENST00000482996 FZD8Q9H461 694 aa15.34■□□□□ 0.05
VARS-225ENST00000482996 NRDE2Q9H7Z3 1164 aa15.34■□□□□ 0.05
VARS-225ENST00000482996 TCF20Q9UGU0 1960 aaKnown RBP15.34■□□□□ 0.05
VARS-225ENST00000482996 A0A1B0GUA9 196 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 TNFRSF10AO00220 468 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 FSCN2O14926 492 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 N4BP3O15049 544 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 B4GALT5O43286 388 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 NPTXRO95502 500 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 PRKCBP05771 671 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 LIG1P18858 919 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 SYT1P21579 422 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 NRIP1P48552 1158 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 NDUFV1P49821 464 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 ERVFC1P60507 584 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 ADAM15Q13444 863 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 PRPF4BQ13523 1007 aaKnown RBP15.33■□□□□ 0.04
VARS-225ENST00000482996 HYIQ5T013 277 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 PLPP4Q5VZY2 271 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 PTCRAQ6ISU1 281 aaPredicted RBP15.33■□□□□ 0.04
VARS-225ENST00000482996 TMC7Q7Z402 723 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 ADGRD2Q7Z7M1 963 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 RBM23Q86U06 439 aaKnown RBP15.33■□□□□ 0.04
VARS-225ENST00000482996 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.33■□□□□ 0.04
VARS-225ENST00000482996 DRC1Q96MC2 740 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 CDCA3Q99618 268 aaPredicted RBP15.33■□□□□ 0.04
VARS-225ENST00000482996 TCF25Q9BQ70 676 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 TIPINQ9BVW5 301 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 APOL6Q9BWW8 343 aa15.33■□□□□ 0.04
VARS-225ENST00000482996 GIT1Q9Y2X7 761 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms