RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 PTGDRQ13258 359 aa22.06■■□□□ 1.12
MSH5-215ENST00000482280 PDIA5Q14554 519 aa22.06■■□□□ 1.12
MSH5-215ENST00000482280 NBR1Q14596 966 aa22.06■■□□□ 1.12
MSH5-215ENST00000482280 SMC1AQ14683 1233 aaKnown RBP22.06■■□□□ 1.12
MSH5-215ENST00000482280 KRT79Q5XKE5 535 aa22.06■■□□□ 1.12
MSH5-215ENST00000482280 DTHD1Q6ZMT9 781 aa22.06■■□□□ 1.12
MSH5-215ENST00000482280 FAM178BQ8IXR5 827 aa22.06■■□□□ 1.12
MSH5-215ENST00000482280 GJD3Q8N144 294 aa22.06■■□□□ 1.12
MSH5-215ENST00000482280 SLC39A11Q8N1S5 342 aa22.06■■□□□ 1.12
MSH5-215ENST00000482280 ASAP3Q8TDY4 903 aa22.06■■□□□ 1.12
MSH5-215ENST00000482280 POP1Q99575 1024 aaKnown RBP22.06■■□□□ 1.12
MSH5-215ENST00000482280 C1QTNF1Q9BXJ1 281 aa22.06■■□□□ 1.12
MSH5-215ENST00000482280 NFKBIZQ9BYH8 718 aa22.06■■□□□ 1.12
MSH5-215ENST00000482280 PRKAG3Q9UGI9 489 aa22.06■■□□□ 1.12
MSH5-215ENST00000482280 PER2O15055 1255 aa22.05■■□□□ 1.12
MSH5-215ENST00000482280 LINC01565O15544 149 aa22.05■■□□□ 1.12
MSH5-215ENST00000482280 TSPAN1O60635 241 aa22.05■■□□□ 1.12
MSH5-215ENST00000482280 GLRA2P23416 452 aa22.05■■□□□ 1.12
MSH5-215ENST00000482280 LTBRP36941 435 aa22.05■■□□□ 1.12
MSH5-215ENST00000482280 ERVFC1P60507 584 aa22.05■■□□□ 1.12
MSH5-215ENST00000482280 SMAD4Q13485 552 aaKnown RBP22.05■■□□□ 1.12
MSH5-215ENST00000482280 PPP2R5AQ15172 486 aa22.05■■□□□ 1.12
MSH5-215ENST00000482280 PADI6Q6TGC4 694 aa22.05■■□□□ 1.12
MSH5-215ENST00000482280 IFNLR1Q8IU57 520 aaPredicted RBP22.05■■□□□ 1.12
MSH5-215ENST00000482280 SNX29Q8TEQ0 813 aa22.05■■□□□ 1.12
MSH5-215ENST00000482280 CSRNP2Q9H175 543 aa22.05■■□□□ 1.12
MSH5-215ENST00000482280 C2orf40Q9H1Z8 148 aa22.05■■□□□ 1.12
MSH5-215ENST00000482280 TBC1D13Q9NVG8 400 aa22.05■■□□□ 1.12
MSH5-215ENST00000482280 STK39Q9UEW8 545 aa22.05■■□□□ 1.12
MSH5-215ENST00000482280 PCDHB6Q9Y5E3 794 aa22.05■■□□□ 1.12
MSH5-215ENST00000482280 PCDHGC5Q9Y5F6 944 aa22.05■■□□□ 1.12
MSH5-215ENST00000482280 TBX10O75333 385 aa22.04■■□□□ 1.12
MSH5-215ENST00000482280 OFD1O75665 1012 aa22.04■■□□□ 1.12
MSH5-215ENST00000482280 NCLP19338 710 aaKnown RBP22.04■■□□□ 1.12
MSH5-215ENST00000482280 HOXA11P31270 313 aaPredicted RBP22.04■■□□□ 1.12
MSH5-215ENST00000482280 MBTD1Q05BQ5 628 aa22.04■■□□□ 1.12
MSH5-215ENST00000482280 MRPL10Q7Z7H8 261 aaKnown RBP22.04■■□□□ 1.12
MSH5-215ENST00000482280 DEPTORQ8TB45 409 aa22.04■■□□□ 1.12
MSH5-215ENST00000482280 CPB2Q96IY4 423 aa22.04■■□□□ 1.12
MSH5-215ENST00000482280 IFT74Q96LB3 600 aa22.04■■□□□ 1.12
MSH5-215ENST00000482280 ARID2Q68CP9 1835 aa22.03■■□□□ 1.12
MSH5-215ENST00000482280 NT5C1B-RDH14C9J2C7 533 aa22.03■■□□□ 1.12
MSH5-215ENST00000482280 NR1I2O75469 434 aa22.03■■□□□ 1.12
MSH5-215ENST00000482280 PRPHP41219 470 aa22.03■■□□□ 1.12
MSH5-215ENST00000482280 DLX2Q07687 328 aaPredicted RBP22.03■■□□□ 1.12
MSH5-215ENST00000482280 DUSP6Q16828 381 aa22.03■■□□□ 1.12
MSH5-215ENST00000482280 GPRC5CQ9NQ84 441 aa22.03■■□□□ 1.12
MSH5-215ENST00000482280 PRMT7Q9NVM4 692 aaPredicted RBP22.03■■□□□ 1.12
MSH5-215ENST00000482280 KIAA1024Q9UPX6 916 aa22.03■■□□□ 1.12
MSH5-215ENST00000482280 DNM3Q9UQ16 869 aa22.03■■□□□ 1.12
MSH5-215ENST00000482280 IPPQ9Y573 584 aa22.03■■□□□ 1.12
MSH5-215ENST00000482280 REV3LO60673 3130 aa22.02■■□□□ 1.12
MSH5-215ENST00000482280 MEIS3P2A8K0S8 358 aa22.02■■□□□ 1.12
MSH5-215ENST00000482280 FSCN2O14926 492 aa22.02■■□□□ 1.12
MSH5-215ENST00000482280 MBTPS2O43462 519 aa22.02■■□□□ 1.12
MSH5-215ENST00000482280 ALDH2P05091 517 aa22.02■■□□□ 1.12
MSH5-215ENST00000482280 CYP11B2P19099 503 aa22.02■■□□□ 1.12
MSH5-215ENST00000482280 GIT2Q14161 759 aa22.02■■□□□ 1.12
MSH5-215ENST00000482280 LARP1BQ659C4 914 aaKnown RBP22.02■■□□□ 1.12
MSH5-215ENST00000482280 SLC27A1Q6PCB7 646 aa22.02■■□□□ 1.12
MSH5-215ENST00000482280 AGMOQ6ZNB7 445 aa22.02■■□□□ 1.12
MSH5-215ENST00000482280 ADHFE1Q8IWW8 467 aa22.02■■□□□ 1.12
MSH5-215ENST00000482280 PRIMPOLQ96LW4 560 aa22.02■■□□□ 1.12
MSH5-215ENST00000482280 APOL6Q9BWW8 343 aa22.02■■□□□ 1.12
MSH5-215ENST00000482280 BHMT2Q9H2M3 363 aa22.02■■□□□ 1.12
MSH5-215ENST00000482280 NRDE2Q9H7Z3 1164 aa22.02■■□□□ 1.12
MSH5-215ENST00000482280 DDX19AQ9NUU7 478 aaKnown RBP22.02■■□□□ 1.12
MSH5-215ENST00000482280 BARX2Q9UMQ3 279 aaPredicted RBP22.02■■□□□ 1.12
MSH5-215ENST00000482280 POMCP01189 267 aa22.01■■□□□ 1.11
MSH5-215ENST00000482280 ARF4P18085 180 aaPredicted RBP22.01■■□□□ 1.11
MSH5-215ENST00000482280 TOB1P50616 345 aaPredicted RBP22.01■■□□□ 1.11
MSH5-215ENST00000482280 SMAD2Q15796 467 aaKnown RBP22.01■■□□□ 1.11
MSH5-215ENST00000482280 MAPK6Q16659 721 aa22.01■■□□□ 1.11
MSH5-215ENST00000482280 UBXN11Q5T124 520 aa22.01■■□□□ 1.11
MSH5-215ENST00000482280 VPS52Q8N1B4 723 aa22.01■■□□□ 1.11
MSH5-215ENST00000482280 C4orf32Q8N8J7 132 aa22.01■■□□□ 1.11
MSH5-215ENST00000482280 KIFAP3Q92845 792 aa22.01■■□□□ 1.11
MSH5-215ENST00000482280 FAN1Q9Y2M0 1017 aa22.01■■□□□ 1.11
MSH5-215ENST00000482280 VCANP13611 3396 aa22.01■■□□□ 1.11
MSH5-215ENST00000482280 TTC28Q96AY4 2481 aa22.01■■□□□ 1.11
MSH5-215ENST00000482280 PLXNA4Q9HCM2 1894 aa22■■□□□ 1.11
MSH5-215ENST00000482280 CD2BP2O95400 341 aaKnown RBP22■■□□□ 1.11
MSH5-215ENST00000482280 CXCL14O95715 111 aa22■■□□□ 1.11
MSH5-215ENST00000482280 GALTP07902 379 aa22■■□□□ 1.11
MSH5-215ENST00000482280 LIG1P18858 919 aa22■■□□□ 1.11
MSH5-215ENST00000482280 NAMPTP43490 491 aa22■■□□□ 1.11
MSH5-215ENST00000482280 COASYQ13057 564 aa22■■□□□ 1.11
MSH5-215ENST00000482280 ZRSR1Q15695 479 aaKnown RBP22■■□□□ 1.11
MSH5-215ENST00000482280 LLGL2Q6P1M3 1020 aa22■■□□□ 1.11
MSH5-215ENST00000482280 DDX53Q86TM3 631 aaKnown RBP22■■□□□ 1.11
MSH5-215ENST00000482280 MRPL43Q8N983 215 aaKnown RBP22■■□□□ 1.11
MSH5-215ENST00000482280 IGSF22Q8N9C0 903 aa22■■□□□ 1.11
MSH5-215ENST00000482280 IGSF21Q96ID5 467 aa22■■□□□ 1.11
MSH5-215ENST00000482280 CDK5RAP3Q96JB5 506 aa22■■□□□ 1.11
MSH5-215ENST00000482280 ADPGKQ9BRR6 497 aa22■■□□□ 1.11
MSH5-215ENST00000482280 TMEM175Q9BSA9 504 aa22■■□□□ 1.11
MSH5-215ENST00000482280 EIF2AQ9BY44 585 aaKnown RBP22■■□□□ 1.11
MSH5-215ENST00000482280 EIF4ENIF1Q9NRA8 985 aaKnown RBP22■■□□□ 1.11
MSH5-215ENST00000482280 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.99■■□□□ 1.11
MSH5-215ENST00000482280 NPTXRO95502 500 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms