RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 WDR81Q562E7 1941 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 ACKR2O00590 384 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 GPR182O15218 404 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 CLDN3O15551 220 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 EPB41P11171 864 aaKnown RBP11.33□□□□□ -0.6
COL12A1-206ENST00000474564 KRT13P13646 458 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 CD44P16070 742 aaKnown RBP11.33□□□□□ -0.6
COL12A1-206ENST00000474564 EIF4BP23588 611 aaKnown RBP11.33□□□□□ -0.6
COL12A1-206ENST00000474564 AXLP30530 894 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 ZNF200P98182 395 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-206ENST00000474564 TMEM62Q0P6H9 643 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 MKRN4PQ13434 485 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-206ENST00000474564 DRP2Q13474 957 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 FAM187BQ17R55 369 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 KIZQ2M2Z5 673 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 CCDC40Q4G0X9 1142 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 CDCA2Q69YH5 1023 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-206ENST00000474564 ANKRD40Q6AI12 368 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 SLC39A5Q6ZMH5 540 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 LUZP1Q86V48 1076 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 IFNLR1Q8IU57 520 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-206ENST00000474564 MAP4K3Q8IVH8 894 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 KSR1Q8IVT5 923 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 HACE1Q8IYU2 909 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 LINC01465Q8N7H1 131 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 SLC43A3Q8NBI5 491 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 BSNDQ8WZ55 320 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 POMGNT1Q8WZA1 660 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 TOX2Q96NM4 488 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 SRRTQ9BXP5 876 aaKnown RBP11.33□□□□□ -0.6
COL12A1-206ENST00000474564 NFE2L3Q9Y4A8 694 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 SQORQ9Y6N5 450 aa11.33□□□□□ -0.6
COL12A1-206ENST00000474564 GOLGA6L6A8MZA4 724 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 TULP1O00294 542 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-206ENST00000474564 N4BP3O15049 544 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 CBFA2T2O43439 604 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 EXOC3O60645 756 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 RPS6KA5O75582 802 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 TOM1L1O75674 476 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 PPP1R37O75864 691 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 SERPINC1P01008 464 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 NR3C1P04150 777 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 DARSP14868 501 aaKnown RBP11.32□□□□□ -0.6
COL12A1-206ENST00000474564 ZSCAN20P17040 1043 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-206ENST00000474564 GARTP22102 1010 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 NR2F2P24468 414 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 EEF1GP26641 437 aaKnown RBP11.32□□□□□ -0.6
COL12A1-206ENST00000474564 PSMC2P35998 433 aaKnown RBP11.32□□□□□ -0.6
COL12A1-206ENST00000474564 MTIF2P46199 727 aaKnown RBP11.32□□□□□ -0.6
COL12A1-206ENST00000474564 CASP5P51878 434 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 PPP2R3AQ06190 1150 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 NFIL3Q16649 462 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 C1orf53Q5VUE5 145 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 CEP135Q66GS9 1140 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 RUFY4Q6ZNE9 571 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 FILIP1Q7Z7B0 1213 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 DRC7Q8IY82 874 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 PPP1R16BQ96T49 567 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 KIFC3Q9BVG8 833 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 STRA6Q9BX79 667 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 TRIM6Q9C030 488 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-206ENST00000474564 SEMA6BQ9H3T3 888 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 TRMT13Q9NUP7 481 aaKnown RBP11.32□□□□□ -0.6
COL12A1-206ENST00000474564 RNF216Q9NWF9 866 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-206ENST00000474564 PRKAG2Q9UGJ0 569 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 CDY2AQ9Y6F7 541 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 GRIN2DO15399 1336 aa11.32□□□□□ -0.6
COL12A1-206ENST00000474564 KAT6AQ92794 2004 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 PES1O00541 588 aaKnown RBP11.31□□□□□ -0.6
COL12A1-206ENST00000474564 STX10O60499 249 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 B4GALT4O60513 344 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 PQBP1O60828 265 aaKnown RBP11.31□□□□□ -0.6
COL12A1-206ENST00000474564 GPR32O75388 356 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 PIGRP01833 764 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 CDK7P50613 346 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 CYP2J2P51589 502 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
COL12A1-206ENST00000474564 ATF7IP2Q5U623 682 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 TTI2Q6NXR4 508 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 NOTUMQ6P988 496 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 ANKRD33Q7Z3H0 272 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 SLC9A9Q8IVB4 645 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 C12orf56Q8IXR9 622 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 XXYLT1Q8NBI6 393 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 PPP1R13LQ8WUF5 828 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 ZBTB10Q96DT7 871 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 CCDC51Q96ER9 411 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 PAWRQ96IZ0 340 aaKnown RBP11.31□□□□□ -0.6
COL12A1-206ENST00000474564 ZNF668Q96K58 619 aaPredicted RBP11.31□□□□□ -0.6
COL12A1-206ENST00000474564 FIZ1Q96SL8 496 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 OSMRQ99650 979 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 MSTO1Q9BUK6 570 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 TRIM5Q9C035 493 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 TRPV6Q9H1D0 765 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 ADAMTS10Q9H324 1103 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 KCTD10Q9H3F6 313 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 FZD8Q9H461 694 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 IFT122Q9HBG6 1241 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 AGPAT3Q9NRZ7 376 aa11.31□□□□□ -0.6
COL12A1-206ENST00000474564 FANCLQ9NW38 375 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms