RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 SLC26A2P50443 739 aa22.7■■□□□ 1.22
SMIM11A-204ENST00000474455 PMS1P54277 932 aaKnown RBP22.7■■□□□ 1.22
SMIM11A-204ENST00000474455 PRMT2P55345 433 aa22.7■■□□□ 1.22
SMIM11A-204ENST00000474455 KCNJ12Q14500 433 aa22.7■■□□□ 1.22
SMIM11A-204ENST00000474455 EMC2Q15006 297 aa22.7■■□□□ 1.22
SMIM11A-204ENST00000474455 GNASQ5JWF2 1037 aa22.7■■□□□ 1.22
SMIM11A-204ENST00000474455 KSR1Q8IVT5 923 aa22.7■■□□□ 1.22
SMIM11A-204ENST00000474455 BSNDQ8WZ55 320 aa22.7■■□□□ 1.22
SMIM11A-204ENST00000474455 RPGRIP1Q96KN7 1286 aa22.7■■□□□ 1.22
SMIM11A-204ENST00000474455 FAM167AQ96KS9 214 aa22.7■■□□□ 1.22
SMIM11A-204ENST00000474455 XPNPEP3Q9NQH7 507 aa22.7■■□□□ 1.22
SMIM11A-204ENST00000474455 A0A1W2PQC6 194 aa22.69■■□□□ 1.22
SMIM11A-204ENST00000474455 TRIM49BA6NDI0 452 aa22.69■■□□□ 1.22
SMIM11A-204ENST00000474455 HBP1O60381 514 aa22.69■■□□□ 1.22
SMIM11A-204ENST00000474455 HSP90B2PQ58FF3 399 aa22.69■■□□□ 1.22
SMIM11A-204ENST00000474455 HAUS4Q9H6D7 363 aa22.69■■□□□ 1.22
SMIM11A-204ENST00000474455 ATP6V0A4Q9HBG4 840 aa22.69■■□□□ 1.22
SMIM11A-204ENST00000474455 SCN10AQ9Y5Y9 1956 aa22.69■■□□□ 1.22
SMIM11A-204ENST00000474455 HSPA8P11142 646 aaKnown RBP22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 KCNA1Q09470 495 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 MKRN4PQ13434 485 aaPredicted RBP22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 CASP8Q14790 479 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 KIAA0753Q2KHM9 967 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 ZC2HC1CQ53FD0 456 aaPredicted RBP22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 ODR4Q5SWX8 454 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 LRRC71Q8N4P6 559 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 NELFBQ8WX92 580 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 UPF3AQ9H1J1 476 aaKnown RBP22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 IKZF4Q9H2S9 585 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 VPS18Q9P253 973 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 DDX20Q9UHI6 824 aaKnown RBP22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 FEZ2Q9UHY8 353 aaPredicted RBP22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 A0A0U1RQJ8 604 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 F2P00734 622 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 KRT9P35527 623 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 PURAQ00577 322 aaKnown RBP22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 PSMD2Q13200 908 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 HIC1Q14526 733 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 EHBP1Q8NDI1 1231 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 ATRIPQ8WXE1 791 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 SUGCTQ9HAC7 445 aa22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 EPN1Q9Y6I3 576 aaPredicted RBP22.68■■□□□ 1.22
SMIM11A-204ENST00000474455 MKI67P46013 3256 aaKnown RBP22.67■■□□□ 1.22
SMIM11A-204ENST00000474455 MAFO75444 373 aaPredicted RBP22.67■■□□□ 1.22
SMIM11A-204ENST00000474455 EEF1GP26641 437 aaKnown RBP22.67■■□□□ 1.22
SMIM11A-204ENST00000474455 LBX1P52954 281 aa22.67■■□□□ 1.22
SMIM11A-204ENST00000474455 PEX3P56589 373 aa22.67■■□□□ 1.22
SMIM11A-204ENST00000474455 VSNL1P62760 191 aa22.67■■□□□ 1.22
SMIM11A-204ENST00000474455 TBC1D8BQ0IIM8 1120 aa22.67■■□□□ 1.22
SMIM11A-204ENST00000474455 MAP9Q49MG5 647 aa22.67■■□□□ 1.22
SMIM11A-204ENST00000474455 CXCL17Q6UXB2 119 aa22.67■■□□□ 1.22
SMIM11A-204ENST00000474455 NELFCDQ8IXH7 590 aa22.67■■□□□ 1.22
SMIM11A-204ENST00000474455 NOC3LQ8WTT2 800 aaKnown RBP22.67■■□□□ 1.22
SMIM11A-204ENST00000474455 SCFD1Q8WVM8 642 aa22.67■■□□□ 1.22
SMIM11A-204ENST00000474455 KIFC3Q9BVG8 833 aa22.67■■□□□ 1.22
SMIM11A-204ENST00000474455 SETD4Q9NVD3 440 aa22.67■■□□□ 1.22
SMIM11A-204ENST00000474455 PRPF6O94906 941 aaKnown RBP22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 GJB1P08034 283 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 HOXD13P35453 343 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 MTFR1Q15390 333 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 LHX8Q68G74 356 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 TRAPPC11Q7Z392 1133 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 OR8K1Q8NGG5 319 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 SLC7A3Q8WY07 619 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 POLR3FQ9H1D9 316 aaPredicted RBP22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 VPS16Q9H269 839 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 SEMA6BQ9H3T3 888 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 HMX1Q9NP08 348 aaPredicted RBP22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 TAB2Q9NYJ8 693 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 TARSL2A2RTX5 802 aaKnown RBP22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 NDUFA10O95299 355 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 GCNT3O95395 438 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 PLS3P13797 630 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 GAP43P17677 238 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 PSEN2P49810 448 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 CKAP4Q07065 602 aaKnown RBP22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 MFSD10Q14728 455 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 KCNA10Q16322 511 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 MARCH8Q5T0T0 291 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 FAM178BQ8IXR5 827 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 ASAP3Q8TDY4 903 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 EEF2KMTQ96G04 330 aa22.66■■□□□ 1.22
SMIM11A-204ENST00000474455 HAS3O00219 553 aa22.65■■□□□ 1.22
SMIM11A-204ENST00000474455 RHOXF2BP0C7M4 288 aa22.65■■□□□ 1.22
SMIM11A-204ENST00000474455 KLRC1P26715 233 aa22.65■■□□□ 1.22
SMIM11A-204ENST00000474455 AARSP49588 968 aaKnown RBP eCLIP22.65■■□□□ 1.22
SMIM11A-204ENST00000474455 TSR1Q2NL82 804 aaKnown RBP22.65■■□□□ 1.22
SMIM11A-204ENST00000474455 EPM2AIP1Q7L775 607 aaPredicted RBP22.65■■□□□ 1.22
SMIM11A-204ENST00000474455 ZNF720Q7Z2F6 126 aa22.65■■□□□ 1.22
SMIM11A-204ENST00000474455 MCPH1Q8NEM0 835 aa22.65■■□□□ 1.22
SMIM11A-204ENST00000474455 KLHDC9Q8NEP7 349 aa22.65■■□□□ 1.22
SMIM11A-204ENST00000474455 DRC1Q96MC2 740 aa22.65■■□□□ 1.22
SMIM11A-204ENST00000474455 DNAJC7Q99615 494 aa22.65■■□□□ 1.22
SMIM11A-204ENST00000474455 RHOXF2Q9BQY4 288 aa22.65■■□□□ 1.22
SMIM11A-204ENST00000474455 UNC93B1Q9H1C4 597 aa22.65■■□□□ 1.22
SMIM11A-204ENST00000474455 OLFML3Q9NRN5 406 aa22.65■■□□□ 1.22
SMIM11A-204ENST00000474455 ADGRA3Q8IWK6 1321 aa22.65■■□□□ 1.22
SMIM11A-204ENST00000474455 IGKV6-21A0A0C4DH24 114 aa22.64■■□□□ 1.22
SMIM11A-204ENST00000474455 LGALS16A8MUM7 142 aa22.64■■□□□ 1.22
SMIM11A-204ENST00000474455 SLC16A4O15374 487 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms