RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 SPATA31D4Q6ZUB0 917 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 ASCL5Q7RTU5 278 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 ZNF410Q86VK4 478 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 HAS1Q92839 578 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 DYDC2Q96IM9 177 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 CPB2Q96IY4 423 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 B3GALT6Q96L58 329 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 NECTIN4Q96NY8 510 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 KLHL5Q96PQ7 755 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 APOL6Q9BWW8 343 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 EIF2AQ9BY44 585 aaKnown RBP12.55□□□□□ -0.4
ACTB-209ENST00000473257 AGPAT5Q9NUQ2 364 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 CACNG4Q9UBN1 327 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 SPDYE4A6NLX3 237 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 NRP1O14786 923 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 GALR2O43603 387 aaPredicted RBP12.54□□□□□ -0.4
ACTB-209ENST00000473257 PI15O43692 258 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 N4BP1O75113 896 aaKnown RBP12.54□□□□□ -0.4
ACTB-209ENST00000473257 KLRC2P26717 231 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 QARSP47897 775 aaKnown RBP12.54□□□□□ -0.4
ACTB-209ENST00000473257 FOSBP53539 338 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 POLGP54098 1239 aaPredicted RBP12.54□□□□□ -0.4
ACTB-209ENST00000473257 PIK3AP1Q6ZUJ8 805 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 CDR2LQ86X02 465 aaPredicted RBP12.54□□□□□ -0.4
ACTB-209ENST00000473257 POTEDQ86YR6 584 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 ZNF710Q8N1W2 664 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 DAGLBQ8NCG7 672 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 SMG8Q8ND04 991 aaKnown RBP12.54□□□□□ -0.4
ACTB-209ENST00000473257 FLCNQ8NFG4 579 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 RSAD2Q8WXG1 361 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 ZFP42Q96MM3 310 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 LXNQ9BS40 222 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 TRAIPQ9BWF2 469 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 RSAD1Q9HA92 442 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 KCNMB3Q9NPA1 279 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 DZANK1Q9NVP4 752 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 MARCH5Q9NX47 278 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 MIOSQ9NXC5 875 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 CYP46A1Q9Y6A2 500 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 EP300Q09472 2414 aaPredicted RBP12.54□□□□□ -0.4
ACTB-209ENST00000473257 ZNF292O60281 2723 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 C2orf16Q68DN1 1984 aa12.54□□□□□ -0.4
ACTB-209ENST00000473257 DMXL1Q9Y485 3027 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 NARSO43776 548 aaKnown RBP12.53□□□□□ -0.4
ACTB-209ENST00000473257 CCNT1O60563 726 aaKnown RBP12.53□□□□□ -0.4
ACTB-209ENST00000473257 LILRB3O75022 631 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 ZNF623O75123 536 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 OR1G1P47890 313 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 CLCN4P51793 760 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 AK2P54819 239 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 SCRN1Q12765 414 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 PPP2R5CQ13362 524 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 EMC2Q15006 297 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 KRT25Q7Z3Z0 450 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 FRMD5Q7Z6J6 570 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 MRPL10Q7Z7H8 261 aaKnown RBP12.53□□□□□ -0.4
ACTB-209ENST00000473257 GPR149Q86SP6 731 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 UBALD2Q8IYN6 164 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 ZDHHC14Q8IZN3 488 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 RNF149Q8NC42 400 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 URGCPQ8TCY9 931 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 ASAP3Q8TDY4 903 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 PSPC1Q8WXF1 523 aaKnown RBP12.53□□□□□ -0.4
ACTB-209ENST00000473257 SLC7A3Q8WY07 619 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 GAD1Q99259 594 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 PRRX2Q99811 253 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 PHF20Q9BVI0 1012 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 INO80BQ9C086 356 aaPredicted RBP12.53□□□□□ -0.4
ACTB-209ENST00000473257 DHX33Q9H6R0 707 aaKnown RBP12.53□□□□□ -0.4
ACTB-209ENST00000473257 XPNPEP1Q9NQW7 623 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 PDRG1Q9NUG6 133 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 FAN1Q9Y2M0 1017 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 IRAK3Q9Y616 596 aa12.53□□□□□ -0.4
ACTB-209ENST00000473257 DCHS1Q96JQ0 3298 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 CCDC194A0A1B0GVG4 234 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 WNT7AO00755 349 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 B4GALT5O43286 388 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 ST18O60284 1047 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 TSPAN1O60635 241 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 RFPL2O75678 378 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 REC8O95072 547 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 CTDNEP1O95476 244 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 SKIP12755 728 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 NPR3P17342 541 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 YWHABP31946 246 aaKnown RBP12.52□□□□□ -0.41
ACTB-209ENST00000473257 MLH1P40692 756 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 RAB27AP51159 221 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 SCNN1GP51170 649 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 NR5A1Q13285 461 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 BMS1Q14692 1282 aaKnown RBP12.52□□□□□ -0.41
ACTB-209ENST00000473257 XKR9Q5GH70 373 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 CWF19L1Q69YN2 538 aaKnown RBP12.52□□□□□ -0.41
ACTB-209ENST00000473257 ASTLQ6HA08 431 aaPredicted RBP12.52□□□□□ -0.41
ACTB-209ENST00000473257 NEK8Q86SG6 692 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 GLYCTKQ8IVS8 523 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 PGBD4Q96DM1 585 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 ZNF274Q96GC6 653 aaPredicted RBP12.52□□□□□ -0.41
ACTB-209ENST00000473257 FAM193BQ96PV7 902 aaPredicted RBP12.52□□□□□ -0.41
ACTB-209ENST00000473257 MFSD1Q9H3U5 465 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 MAN1C1Q9NR34 630 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms