RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 ADAM15Q13444 863 aa18.96■□□□□ 0.63
SSBP1-207ENST00000468267 AMHR2Q16671 573 aa18.96■□□□□ 0.63
SSBP1-207ENST00000468267 PUS10Q3MIT2 529 aaKnown RBP18.96■□□□□ 0.63
SSBP1-207ENST00000468267 NOMO2Q5JPE7 1267 aa18.96■□□□□ 0.63
SSBP1-207ENST00000468267 PDE12Q6L8Q7 609 aaKnown RBP18.96■□□□□ 0.63
SSBP1-207ENST00000468267 DTHD1Q6ZMT9 781 aa18.96■□□□□ 0.63
SSBP1-207ENST00000468267 AGMOQ6ZNB7 445 aa18.96■□□□□ 0.63
SSBP1-207ENST00000468267 ADGRD2Q7Z7M1 963 aa18.96■□□□□ 0.63
SSBP1-207ENST00000468267 MICAL1Q8TDZ2 1067 aa18.96■□□□□ 0.63
SSBP1-207ENST00000468267 MRPS27Q92552 414 aaKnown RBP18.96■□□□□ 0.63
SSBP1-207ENST00000468267 CCDC51Q96ER9 411 aa18.96■□□□□ 0.63
SSBP1-207ENST00000468267 PUF60Q9UHX1 559 aaKnown RBP18.96■□□□□ 0.63
SSBP1-207ENST00000468267 KIAA1024Q9UPX6 916 aa18.96■□□□□ 0.63
SSBP1-207ENST00000468267 PCDHGC5Q9Y5F6 944 aa18.96■□□□□ 0.63
SSBP1-207ENST00000468267 GRXCR2A6NFK2 248 aa18.95■□□□□ 0.62
SSBP1-207ENST00000468267 FSCN2O14926 492 aa18.95■□□□□ 0.62
SSBP1-207ENST00000468267 NCLP19338 710 aaKnown RBP18.95■□□□□ 0.62
SSBP1-207ENST00000468267 ALDH7A1P49419 539 aaKnown RBP18.95■□□□□ 0.62
SSBP1-207ENST00000468267 BCAR1P56945 870 aa18.95■□□□□ 0.62
SSBP1-207ENST00000468267 ATP2C1P98194 919 aaPredicted RBP18.95■□□□□ 0.62
SSBP1-207ENST00000468267 KRT17Q04695 432 aa18.95■□□□□ 0.62
SSBP1-207ENST00000468267 PTCRAQ6ISU1 281 aaPredicted RBP18.95■□□□□ 0.62
SSBP1-207ENST00000468267 NOTUMQ6P988 496 aa18.95■□□□□ 0.62
SSBP1-207ENST00000468267 SLC39A11Q8N1S5 342 aa18.95■□□□□ 0.62
SSBP1-207ENST00000468267 CNNM3Q8NE01 707 aa18.95■□□□□ 0.62
SSBP1-207ENST00000468267 SNX29Q8TEQ0 813 aa18.95■□□□□ 0.62
SSBP1-207ENST00000468267 CPB2Q96IY4 423 aa18.95■□□□□ 0.62
SSBP1-207ENST00000468267 TBC1D13Q9NVG8 400 aa18.95■□□□□ 0.62
SSBP1-207ENST00000468267 CNTNAP2Q9UHC6 1331 aa18.95■□□□□ 0.62
SSBP1-207ENST00000468267 LRRIQ4A6NIV6 560 aa18.94■□□□□ 0.62
SSBP1-207ENST00000468267 PP2D1A8MPX8 630 aa18.94■□□□□ 0.62
SSBP1-207ENST00000468267 LINC01565O15544 149 aa18.94■□□□□ 0.62
SSBP1-207ENST00000468267 NRIP1P48552 1158 aa18.94■□□□□ 0.62
SSBP1-207ENST00000468267 DLX2Q07687 328 aaPredicted RBP18.94■□□□□ 0.62
SSBP1-207ENST00000468267 KRT79Q5XKE5 535 aa18.94■□□□□ 0.62
SSBP1-207ENST00000468267 CDCA2Q69YH5 1023 aaPredicted RBP18.94■□□□□ 0.62
SSBP1-207ENST00000468267 EFHBQ8N7U6 833 aa18.94■□□□□ 0.62
SSBP1-207ENST00000468267 SMG8Q8ND04 991 aaKnown RBP18.94■□□□□ 0.62
SSBP1-207ENST00000468267 EIF2AQ9BY44 585 aaKnown RBP18.94■□□□□ 0.62
SSBP1-207ENST00000468267 CSRNP2Q9H175 543 aa18.94■□□□□ 0.62
SSBP1-207ENST00000468267 BHMT2Q9H2M3 363 aa18.94■□□□□ 0.62
SSBP1-207ENST00000468267 TLE6Q9H808 572 aa18.94■□□□□ 0.62
SSBP1-207ENST00000468267 DDX19AQ9NUU7 478 aaKnown RBP18.94■□□□□ 0.62
SSBP1-207ENST00000468267 INPP5FQ9Y2H2 1132 aa18.94■□□□□ 0.62
SSBP1-207ENST00000468267 CARNS1A5YM72 827 aa18.93■□□□□ 0.62
SSBP1-207ENST00000468267 ARF4P18085 180 aaPredicted RBP18.93■□□□□ 0.62
SSBP1-207ENST00000468267 CDC25AP30304 524 aa18.93■□□□□ 0.62
SSBP1-207ENST00000468267 RNASELQ05823 741 aaKnown RBP18.93■□□□□ 0.62
SSBP1-207ENST00000468267 RBM23Q86U06 439 aaKnown RBP18.93■□□□□ 0.62
SSBP1-207ENST00000468267 URGCPQ8TCY9 931 aa18.93■□□□□ 0.62
SSBP1-207ENST00000468267 BSNDQ8WZ55 320 aa18.93■□□□□ 0.62
SSBP1-207ENST00000468267 MMTAG2Q9BU76 263 aaKnown RBP18.93■□□□□ 0.62
SSBP1-207ENST00000468267 NRDE2Q9H7Z3 1164 aa18.93■□□□□ 0.62
SSBP1-207ENST00000468267 RSAD1Q9HA92 442 aa18.93■□□□□ 0.62
SSBP1-207ENST00000468267 UBN1Q9NPG3 1134 aa18.93■□□□□ 0.62
SSBP1-207ENST00000468267 DNM3Q9UQ16 869 aa18.93■□□□□ 0.62
SSBP1-207ENST00000468267 IPPQ9Y573 584 aa18.93■□□□□ 0.62
SSBP1-207ENST00000468267 A0A1B0GUA9 196 aa18.92■□□□□ 0.62
SSBP1-207ENST00000468267 NT5C1B-RDH14C9J2C7 533 aa18.92■□□□□ 0.62
SSBP1-207ENST00000468267 B4GALT5O43286 388 aa18.92■□□□□ 0.62
SSBP1-207ENST00000468267 ZC3H11AO75152 810 aaKnown RBP eCLIP18.92■□□□□ 0.62
SSBP1-207ENST00000468267 TBX10O75333 385 aa18.92■□□□□ 0.62
SSBP1-207ENST00000468267 EYA4O95677 639 aa18.92■□□□□ 0.62
SSBP1-207ENST00000468267 ITGA4P13612 1032 aa18.92■□□□□ 0.62
SSBP1-207ENST00000468267 FAM187BQ17R55 369 aa18.92■□□□□ 0.62
SSBP1-207ENST00000468267 ARL6IP4Q66PJ3 421 aaKnown RBP18.92■□□□□ 0.62
SSBP1-207ENST00000468267 ZBTB8OSQ8IWT0 167 aa18.92■□□□□ 0.62
SSBP1-207ENST00000468267 PRIMPOLQ96LW4 560 aa18.92■□□□□ 0.62
SSBP1-207ENST00000468267 TCF25Q9BQ70 676 aa18.92■□□□□ 0.62
SSBP1-207ENST00000468267 C2orf40Q9H1Z8 148 aa18.92■□□□□ 0.62
SSBP1-207ENST00000468267 FZD8Q9H461 694 aa18.92■□□□□ 0.62
SSBP1-207ENST00000468267 NGRNQ9NPE2 291 aaKnown RBP18.92■□□□□ 0.62
SSBP1-207ENST00000468267 KANSL3Q9P2N6 904 aa18.92■□□□□ 0.62
SSBP1-207ENST00000468267 TRIOO75962 3097 aa18.91■□□□□ 0.62
SSBP1-207ENST00000468267 PER2O15055 1255 aa18.91■□□□□ 0.62
SSBP1-207ENST00000468267 GALTP07902 379 aa18.91■□□□□ 0.62
SSBP1-207ENST00000468267 IL9P15248 144 aa18.91■□□□□ 0.62
SSBP1-207ENST00000468267 NAMPTP43490 491 aa18.91■□□□□ 0.62
SSBP1-207ENST00000468267 AFF1P51825 1210 aaKnown RBP18.91■□□□□ 0.62
SSBP1-207ENST00000468267 PLPP4Q5VZY2 271 aa18.91■□□□□ 0.62
SSBP1-207ENST00000468267 BRAPQ7Z569 592 aa18.91■□□□□ 0.62
SSBP1-207ENST00000468267 ZNF280BQ86YH2 543 aa18.91■□□□□ 0.62
SSBP1-207ENST00000468267 FAM178BQ8IXR5 827 aa18.91■□□□□ 0.62
SSBP1-207ENST00000468267 KIFAP3Q92845 792 aa18.91■□□□□ 0.62
SSBP1-207ENST00000468267 CDCA3Q99618 268 aaPredicted RBP18.91■□□□□ 0.62
SSBP1-207ENST00000468267 GBP3Q9H0R5 595 aa18.91■□□□□ 0.62
SSBP1-207ENST00000468267 POLD4Q9HCU8 107 aa18.91■□□□□ 0.62
SSBP1-207ENST00000468267 ENTPD7Q9NQZ7 604 aa18.91■□□□□ 0.62
SSBP1-207ENST00000468267 PRMT7Q9NVM4 692 aaPredicted RBP18.91■□□□□ 0.62
SSBP1-207ENST00000468267 DNAJB4Q9UDY4 337 aa18.91■□□□□ 0.62
SSBP1-207ENST00000468267 FAM50BQ9Y247 325 aa18.91■□□□□ 0.62
SSBP1-207ENST00000468267 TDRD15B5MCY1 1934 aaKnown RBP18.9■□□□□ 0.62
SSBP1-207ENST00000468267 FSD2A1L4K1 749 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 VWA3AA6NCI4 1184 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 E9PMD0 336 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 INPPL1O15357 1258 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 B4GALT3O60512 393 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 PDCP20941 246 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 NDUFV1P49821 464 aa18.9■□□□□ 0.62
SSBP1-207ENST00000468267 PPP2R5AQ15172 486 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms