RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 KCTD19Q17RG1 926 aaPredicted RBP19.79■□□□□ 0.76
SYNE4-204ENST00000465425 FKBP1CQ5VVH2 108 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 TRMT1LQ7Z2T5 733 aaKnown RBP19.79■□□□□ 0.76
SYNE4-204ENST00000465425 HAUS6Q7Z4H7 955 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 TMC3Q7Z5M5 1100 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 C12orf56Q8IXR9 622 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 UBL4BQ8N7F7 174 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 GMLQ99445 158 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 TRIM51Q9BSJ1 452 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 AGO4Q9HCK5 861 aaKnown RBP19.79■□□□□ 0.76
SYNE4-204ENST00000465425 BCCIPQ9P287 314 aaKnown RBP eCLIP19.79■□□□□ 0.76
SYNE4-204ENST00000465425 NFS1Q9Y697 457 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 PFASO15067 1338 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 ZNF536O15090 1300 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 ALAS1P13196 640 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 INPP5BP32019 993 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 DHX9Q08211 1270 aaKnown RBP19.79■□□□□ 0.76
SYNE4-204ENST00000465425 EPC2Q52LR7 807 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 ODF2Q5BJF6 829 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 FAM83AQ86UY5 434 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 RPUSD2Q8IZ73 545 aaKnown RBP19.79■□□□□ 0.76
SYNE4-204ENST00000465425 FMO2Q99518 471 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 SH2D3AQ9BRG2 576 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 HOMER2Q9NSB8 354 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 NR2E1Q9Y466 385 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 ALG6Q9Y672 507 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 SYNGAP1Q96PV0 1343 aa19.78■□□□□ 0.76
SYNE4-204ENST00000465425 MIF4GDA9UHW6 222 aaKnown RBP19.78■□□□□ 0.76
SYNE4-204ENST00000465425 HADHBP55084 474 aaKnown RBP19.78■□□□□ 0.76
SYNE4-204ENST00000465425 GPC5P78333 572 aa19.78■□□□□ 0.76
SYNE4-204ENST00000465425 POU5F1Q01860 360 aaKnown RBP19.78■□□□□ 0.76
SYNE4-204ENST00000465425 PCNX4Q63HM2 1172 aa19.78■□□□□ 0.76
SYNE4-204ENST00000465425 TMEM174Q8WUU8 243 aa19.78■□□□□ 0.76
SYNE4-204ENST00000465425 IWS1Q96ST2 819 aa19.78■□□□□ 0.76
SYNE4-204ENST00000465425 TBC1D22BQ9NU19 505 aa19.78■□□□□ 0.76
SYNE4-204ENST00000465425 TMOD4Q9NZQ9 345 aa19.78■□□□□ 0.76
SYNE4-204ENST00000465425 A0A087WUV0 522 aaPredicted RBP19.77■□□□□ 0.76
SYNE4-204ENST00000465425 C11orf63Q6NUN7 778 aa19.77■□□□□ 0.76
SYNE4-204ENST00000465425 UBIAD1Q9Y5Z9 338 aa19.77■□□□□ 0.76
SYNE4-204ENST00000465425 PEX3P56589 373 aa19.77■□□□□ 0.76
SYNE4-204ENST00000465425 GTF2BQ00403 316 aa19.77■□□□□ 0.76
SYNE4-204ENST00000465425 TADA2BQ86TJ2 420 aa19.77■□□□□ 0.76
SYNE4-204ENST00000465425 RTKN2Q8IZC4 609 aa19.77■□□□□ 0.76
SYNE4-204ENST00000465425 CLEC4DQ8WXI8 215 aa19.77■□□□□ 0.76
SYNE4-204ENST00000465425 ALG3Q92685 438 aa19.77■□□□□ 0.76
SYNE4-204ENST00000465425 RASAL2Q9UJF2 1139 aa19.77■□□□□ 0.76
SYNE4-204ENST00000465425 SLC16A4O15374 487 aa19.76■□□□□ 0.75
SYNE4-204ENST00000465425 RTN2O75298 545 aa19.76■□□□□ 0.75
SYNE4-204ENST00000465425 COPB2P35606 906 aa19.76■□□□□ 0.75
SYNE4-204ENST00000465425 SNRPFP62306 86 aaKnown RBP19.76■□□□□ 0.75
SYNE4-204ENST00000465425 DHX34Q14147 1143 aaKnown RBP19.76■□□□□ 0.75
SYNE4-204ENST00000465425 PTGISQ16647 500 aa19.76■□□□□ 0.75
SYNE4-204ENST00000465425 ZNF746Q6NUN9 644 aaPredicted RBP19.76■□□□□ 0.75
SYNE4-204ENST00000465425 PPM1KQ8N3J5 372 aa19.76■□□□□ 0.75
SYNE4-204ENST00000465425 ERP44Q9BS26 406 aa19.76■□□□□ 0.75
SYNE4-204ENST00000465425 TIPINQ9BVW5 301 aa19.76■□□□□ 0.75
SYNE4-204ENST00000465425 ZNF277Q9NRM2 450 aaPredicted RBP19.76■□□□□ 0.75
SYNE4-204ENST00000465425 TMEM110-MUSTN1A8MSY1 372 aa19.76■□□□□ 0.75
SYNE4-204ENST00000465425 MYO1FO00160 1098 aa19.76■□□□□ 0.75
SYNE4-204ENST00000465425 MAPK13O15264 365 aa19.76■□□□□ 0.75
SYNE4-204ENST00000465425 LYPLA2O95372 231 aa19.76■□□□□ 0.75
SYNE4-204ENST00000465425 MRPS9P82933 396 aaKnown RBP19.76■□□□□ 0.75
SYNE4-204ENST00000465425 IFFO1Q0D2I5 559 aa19.76■□□□□ 0.75
SYNE4-204ENST00000465425 TTC31Q49AM3 519 aaPredicted RBP19.76■□□□□ 0.75
SYNE4-204ENST00000465425 SPATS2Q86XZ4 545 aaKnown RBP19.76■□□□□ 0.75
SYNE4-204ENST00000465425 TMEM117Q9H0C3 514 aa19.76■□□□□ 0.75
SYNE4-204ENST00000465425 ERVK-5Q9HDB9 667 aa19.76■□□□□ 0.75
SYNE4-204ENST00000465425 ATP8A1Q9Y2Q0 1164 aa19.76■□□□□ 0.75
SYNE4-204ENST00000465425 FAM187AA6NFU0 413 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 WDR46O15213 610 aaKnown RBP19.75■□□□□ 0.75
SYNE4-204ENST00000465425 VCAM1P19320 739 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 EIF2AK2P19525 551 aaKnown RBP19.75■□□□□ 0.75
SYNE4-204ENST00000465425 SLC17A8Q8NDX2 589 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 ST6GALNAC4Q9H4F1 302 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 RAVER2Q9HCJ3 691 aaKnown RBP19.75■□□□□ 0.75
SYNE4-204ENST00000465425 GPRC5CQ9NQ84 441 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.75■□□□□ 0.752e-7■■■■■ 181.9
SYNE4-204ENST00000465425 EXOC7Q9UPT5 735 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 TMEM150BA6NC51 233 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 GOLGA8IPA6NC78 632 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 GOLGA8JA6NMD2 632 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 BACH1O14867 736 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 KIAA0754O94854 1291 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 HSPA6P17066 643 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 KRT71Q3SY84 523 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 TBC1D10BQ4KMP7 808 aaPredicted RBP19.75■□□□□ 0.75
SYNE4-204ENST00000465425 C1orf220Q5T0J3 134 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 FAM102BQ5T8I3 360 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 MICALL1Q8N3F8 863 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 TTLL6Q8N841 843 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 ZSWIM2Q8NEG5 633 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 SYTL5Q8TDW5 730 aaPredicted RBP19.75■□□□□ 0.75
SYNE4-204ENST00000465425 EPS8L1Q8TE68 723 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 GLG1Q92896 1179 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 PSMD1Q99460 953 aa19.75■□□□□ 0.75
SYNE4-204ENST00000465425 CTDP1Q9Y5B0 961 aaPredicted RBP19.75■□□□□ 0.75
SYNE4-204ENST00000465425 E7EVH7 732 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 SGPL1O95470 568 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 MYCLP12524 364 aaPredicted RBP19.74■□□□□ 0.75
SYNE4-204ENST00000465425 SMTNP53814 917 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms