RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 ERMARDQ5T6L9 678 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 ANKRD20A1Q5TYW2 823 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 ANKRD20A3Q5VUR7 823 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 NUGGCQ68CJ6 796 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 MCF2L2Q86YR7 1114 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 SH3TC2Q8TF17 1288 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 WASF1Q92558 559 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 PHKBQ93100 1093 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 SLC26A6Q9BXS9 759 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 BLOC1S6Q9UL45 172 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 PLAAQ9Y263 795 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 GMEB1Q9Y692 573 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 ZSWIM8A7E2V4 1837 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 PLXNB2O15031 1838 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 ZNF236Q9UL36 1845 aa12.42□□□□□ -0.42
TRAPPC3-205ENST00000462715 A0A1W2PQJ5 194 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 H0YGN5 161 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 CES2O00748 559 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 CREB3O43889 395 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 PPP1R11O60927 126 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 LCA5LO95447 670 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 FAM163BP0C2L3 166 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 EEF1GP26641 437 aaKnown RBP12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 ADORA2AP29274 412 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 MXRA7P84157 204 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 PRKCZQ05513 592 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 MORN1Q5T089 497 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 WDR59Q6PJI9 974 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 HEATR3Q7Z4Q2 680 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 TRIM4Q9C037 500 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 NSRP1Q9H0G5 558 aaKnown RBP12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 VCXQ9H320 206 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 NFS1Q9Y697 457 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 hCG_1642624A0A1W2PR95 340 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 PYGLP06737 847 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 CLTAP09496 248 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 SKIV2L2P42285 1042 aaKnown RBP12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 ABL2P42684 1182 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 ATP11AP98196 1134 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 MAP2K5Q13163 448 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 PFKFB3Q16875 520 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 PPP1R18Q6NYC8 613 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 DPP9Q86TI2 863 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 RNF10Q8N5U6 811 aaKnown RBP12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 RAET1EQ8TD07 263 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 FAM129AQ9BZQ8 928 aa12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRAPPC3-205ENST00000462715 TTC26A0AVF1 554 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 LGALS16A8MUM7 142 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 RNF225M0QZC1 329 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 PJA2O43164 708 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 DEXIO95424 95 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 MYBP10242 640 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 SCG2P13521 617 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 TAL1P17542 331 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 FLT3LGP49771 235 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 EIF3BP55884 814 aaKnown RBP12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 ZBED6P86452 979 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 CAP1Q01518 475 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 IRF5Q13568 498 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 SPA17Q15506 151 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 TAF11Q15544 211 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 NSMFQ6X4W1 530 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 CROCCP2Q86T23 111 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 ARHGAP18Q8N392 663 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 NOC3LQ8WTT2 800 aaKnown RBP12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 CLEC4DQ8WXI8 215 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 APBA2Q99767 749 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 ISCUQ9H1K1 167 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 GJD2Q9UKL4 321 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 KCNJ18B7U540 433 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 BHMG1C9JSJ3 638 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 NFIBO00712 420 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 PYGBP11216 843 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 HNRNPH3P31942 346 aaKnown RBP12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 GBP1P32455 592 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 DNM2P50570 870 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 DPYDQ12882 1025 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 KCNJ12Q14500 433 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 RNF207Q6ZRF8 634 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 TRPM8Q7Z2W7 1104 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 SAMD3Q8N6K7 520 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 TBC1D5Q92609 795 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 PPP1R14BQ96C90 147 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 CCDC28BQ9BUN5 200 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 FAM192AQ9GZU8 254 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 ZWILCHQ9H900 591 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 PANK4Q9NVE7 773 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 TMCO1Q9UM00 188 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 PHF24Q9UPV7 400 aa12.4□□□□□ -0.42
TRAPPC3-205ENST00000462715 DPPA5A6NC42 116 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 BMP15O95972 392 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 HOXC6P09630 235 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 XRCC5P13010 732 aaKnown RBP12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 CD44P16070 742 aaKnown RBP12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 ATP6V1C1P21283 382 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 RANBP1P43487 201 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 NAPAP54920 295 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 NLRP5P59047 1200 aa12.39□□□□□ -0.43
TRAPPC3-205ENST00000462715 NOSTRINQ8IVI9 506 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms