RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CCDC36Q8IYA8 594 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 BSNDQ8WZ55 320 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ASB2Q96Q27 587 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ATP11BQ9Y2G3 1177 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 TSC22D4Q9Y3Q8 395 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 MED12Q93074 2177 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 PVALEFA0A1B0GWK0 134 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 A0A1W2PQJ5 194 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 COPEO14579 308 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ALOX5P09917 674 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 S100A1P23297 94 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ELF1P32519 619 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 TALDO1P37837 337 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 SERPINH1P50454 418 aaKnown RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 KRT74Q7RTS7 529 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 CCDC8Q9H0W5 538 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 PHF11Q9UIL8 331 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 PRG3Q9Y2Y8 225 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 H3BQF6 201 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ADCY6O43306 1168 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 PFKFB1P16118 471 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 OCRLQ01968 901 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 MIS18BP1Q6P0N0 1132 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 CC2D1AQ6P1N0 951 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 TTC30AQ86WT1 665 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 TTC30BQ8N4P2 665 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ATP8B4Q8TF62 1192 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 P2RX5Q93086 422 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 OTULINQ96BN8 352 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 VPS50Q96JG6 964 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 OSBPL10Q9BXB5 764 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 NEUROG2Q9H2A3 272 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 CLEC4MQ9H2X3 399 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 HMG20AQ9NP66 347 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 DISC1Q9NRI5 854 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 STAP1Q9ULZ2 295 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 SUGT1Q9Y2Z0 365 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 CKAP5Q14008 2032 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 SMIM31A0A1B0GVY4 71 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 IFNB1P01574 187 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ARHGAP44Q17R89 818 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 SKAP1Q86WV1 359 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 TP53INP1Q96A56 240 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 SCN3BQ9NY72 215 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 TMCO1Q9UM00 188 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 MAGEA13PA6NCF6 341 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 PDE8AO60658 829 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 RASA1P20936 1047 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 DCTN2Q13561 401 aaKnown RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 SPATA5Q8NB90 893 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 RFWD2Q8NHY2 731 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 MLPHQ9BV36 600 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 UBP1Q9NZI7 540 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ZNF229Q9UJW7 825 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 KPNA4O00629 521 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 CAPN9O14815 690 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ZBTB7BO15156 539 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 BAG2O95816 211 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 FAM69CQ0P6D2 419 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 LONRF3Q496Y0 759 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 XRRA1Q6P2D8 792 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 KCNV1Q6PIU1 500 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ZNF398Q8TD17 642 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 CASP10Q92851 521 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 USP15Q9Y4E8 981 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 PZPP20742 1482 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 GTPBP10A4D1E9 387 aaKnown RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 FAM47DPA6NHR8 397 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ANGPT2O15123 496 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 UFL1O94874 794 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 IFNA14P01570 189 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 RPS6KA3P51812 740 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 PTK2BQ14289 1009 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 KRT40Q6A162 431 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 BBS7Q8IWZ6 715 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 LRRC43Q8N309 656 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 DEPTORQ8TB45 409 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 RASSF5Q8WWW0 418 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ZSCAN10Q96SZ4 725 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 AMNQ9BXJ7 453 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 FAM124BQ9H5Z6 455 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ZNF556Q9HAH1 456 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 SUCLA2Q9P2R7 463 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 HSPA4LO95757 839 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 OATP04181 439 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 DNAJB7Q7Z6W7 309 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 LINC00523Q86TU6 105 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 NOA1Q8NC60 698 aaKnown RBP5.52□□□□□ -1.53
CSMD3-204ENST00000455883 CNGB3Q9NQW8 809 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 DIP2AQ14689 1571 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 SMIM23A6NLE4 172 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 VPS4BO75351 444 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 CCNE1P24864 410 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 ALDH1B1P30837 517 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 COPZ1P61923 177 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 TNFAIP2Q03169 654 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 TFCP2Q12800 502 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 MDH1BQ5I0G3 518 aa5.52□□□□□ -1.53
CSMD3-204ENST00000455883 SDE2Q6IQ49 451 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms