RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 TMEM134Q9H6X4 195 aa26.48■■□□□ 1.83
CPSF4-207ENST00000451876 PIN4Q9Y237 131 aaKnown RBP26.48■■□□□ 1.83
CPSF4-207ENST00000451876 PPP1R37O75864 691 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 FGBP02675 491 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 MYBP10242 640 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 ARF4P18085 180 aaPredicted RBP26.47■■□□□ 1.83
CPSF4-207ENST00000451876 HOXA11P31270 313 aaPredicted RBP26.47■■□□□ 1.83
CPSF4-207ENST00000451876 FAM187BQ17R55 369 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 FAM26FQ5R3K3 315 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 RTN4RL1Q86UN2 441 aaPredicted RBP26.47■■□□□ 1.83
CPSF4-207ENST00000451876 CPB2Q96IY4 423 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 UBE2OQ9C0C9 1292 aaKnown RBP26.47■■□□□ 1.83
CPSF4-207ENST00000451876 ST6GALNAC4Q9H4F1 302 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 CNTNAP2Q9UHC6 1331 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 GCNT3O95395 438 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 GTF2BQ00403 316 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 IKBKEQ14164 716 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 PCBP1Q15365 356 aaKnown RBP eCLIP26.47■■□□□ 1.83
CPSF4-207ENST00000451876 KCNN1Q92952 543 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 PRIMPOLQ96LW4 560 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 STRA6Q9BX79 667 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 EXOC1Q9NV70 894 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 CXXC1Q9P0U4 656 aaPredicted RBP26.47■■□□□ 1.83
CPSF4-207ENST00000451876 HOOK1Q9UJC3 728 aaKnown RBP26.47■■□□□ 1.83
CPSF4-207ENST00000451876 PCDHA5Q9Y5H7 936 aa26.47■■□□□ 1.83
CPSF4-207ENST00000451876 ACKR2O00590 384 aa26.46■■□□□ 1.83
CPSF4-207ENST00000451876 PRPF4BQ13523 1007 aaKnown RBP26.46■■□□□ 1.83
CPSF4-207ENST00000451876 DSC3Q14574 896 aa26.46■■□□□ 1.83
CPSF4-207ENST00000451876 CDR2LQ86X02 465 aaPredicted RBP26.46■■□□□ 1.83
CPSF4-207ENST00000451876 SPATA20Q8TB22 786 aa26.46■■□□□ 1.83
CPSF4-207ENST00000451876 ADAM2Q99965 735 aa26.46■■□□□ 1.83
CPSF4-207ENST00000451876 FTHL17Q9BXU8 183 aa26.46■■□□□ 1.83
CPSF4-207ENST00000451876 SLC39A2Q9NP94 309 aa26.46■■□□□ 1.83
CPSF4-207ENST00000451876 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.45■■□□□ 1.82
CPSF4-207ENST00000451876 H0YCG3 227 aa26.45■■□□□ 1.82
CPSF4-207ENST00000451876 ACTN1P12814 892 aa26.45■■□□□ 1.82
CPSF4-207ENST00000451876 KCNA1Q09470 495 aa26.45■■□□□ 1.82
CPSF4-207ENST00000451876 STK4Q13043 487 aa26.45■■□□□ 1.82
CPSF4-207ENST00000451876 SHHQ15465 462 aa26.45■■□□□ 1.82
CPSF4-207ENST00000451876 NT5DC1Q5TFE4 455 aa26.45■■□□□ 1.82
CPSF4-207ENST00000451876 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.45■■□□□ 1.823e-9■■■■■ 29.7
CPSF4-207ENST00000451876 CLSTN2Q9H4D0 955 aa26.45■■□□□ 1.82
CPSF4-207ENST00000451876 TBX20Q9UMR3 447 aa26.45■■□□□ 1.82
CPSF4-207ENST00000451876 ABHD14A-ACY1A0A1B0GW23 586 aa26.44■■□□□ 1.82
CPSF4-207ENST00000451876 BAIAP3O94812 1187 aa26.44■■□□□ 1.82
CPSF4-207ENST00000451876 RHOBTB3O94955 611 aa26.44■■□□□ 1.82
CPSF4-207ENST00000451876 MBD3O95983 291 aa26.44■■□□□ 1.82
CPSF4-207ENST00000451876 STRN3Q13033 797 aa26.44■■□□□ 1.82
CPSF4-207ENST00000451876 CHRDL2Q6WN34 429 aa26.44■■□□□ 1.82
CPSF4-207ENST00000451876 KIAA0895Q8NCT3 520 aa26.44■■□□□ 1.82
CPSF4-207ENST00000451876 SLC17A8Q8NDX2 589 aa26.44■■□□□ 1.82
CPSF4-207ENST00000451876 TSPYL2Q9H2G4 693 aaPredicted RBP26.44■■□□□ 1.82
CPSF4-207ENST00000451876 IKZF4Q9H2S9 585 aa26.44■■□□□ 1.82
CPSF4-207ENST00000451876 TTC3P53804 2025 aa26.44■■□□□ 1.82
CPSF4-207ENST00000451876 WDR5P61964 334 aaKnown RBP26.43■■□□□ 1.82
CPSF4-207ENST00000451876 KCNB1Q14721 858 aa26.43■■□□□ 1.82
CPSF4-207ENST00000451876 HERVK_113Q902F9 699 aa26.43■■□□□ 1.82
CPSF4-207ENST00000451876 SMARCE1Q969G3 411 aa26.43■■□□□ 1.82
CPSF4-207ENST00000451876 TARS2Q9BW92 718 aaKnown RBP26.43■■□□□ 1.82
CPSF4-207ENST00000451876 PRO3102Q9H379 93 aa26.43■■□□□ 1.82
CPSF4-207ENST00000451876 ZBBXA8MT70 800 aa26.43■■□□□ 1.82
CPSF4-207ENST00000451876 ENPP3O14638 875 aa26.43■■□□□ 1.82
CPSF4-207ENST00000451876 PRPF6O94906 941 aaKnown RBP26.43■■□□□ 1.82
CPSF4-207ENST00000451876 ZSCAN20P17040 1043 aaPredicted RBP26.43■■□□□ 1.82
CPSF4-207ENST00000451876 SARSP49591 514 aaKnown RBP26.43■■□□□ 1.82
CPSF4-207ENST00000451876 DEFB103AP81534 67 aa26.43■■□□□ 1.82
CPSF4-207ENST00000451876 TWF2Q6IBS0 349 aaKnown RBP26.43■■□□□ 1.82
CPSF4-207ENST00000451876 EPM2AIP1Q7L775 607 aaPredicted RBP26.43■■□□□ 1.82
CPSF4-207ENST00000451876 MAP4K3Q8IVH8 894 aa26.43■■□□□ 1.82
CPSF4-207ENST00000451876 NUP62CLQ9H1M0 184 aa26.43■■□□□ 1.82
CPSF4-207ENST00000451876 CHST12Q9NRB3 414 aa26.43■■□□□ 1.82
CPSF4-207ENST00000451876 RGS18Q9NS28 235 aa26.43■■□□□ 1.82
CPSF4-207ENST00000451876 A0A1B0GUA9 196 aa26.42■■□□□ 1.82
CPSF4-207ENST00000451876 SCP2P22307 547 aa26.42■■□□□ 1.82
CPSF4-207ENST00000451876 AXLP30530 894 aa26.42■■□□□ 1.82
CPSF4-207ENST00000451876 BMP8BP34820 402 aa26.42■■□□□ 1.82
CPSF4-207ENST00000451876 NOTUMQ6P988 496 aa26.42■■□□□ 1.82
CPSF4-207ENST00000451876 GSDMAQ96QA5 445 aa26.42■■□□□ 1.82
CPSF4-207ENST00000451876 MRPL4Q9BYD3 311 aaKnown RBP26.42■■□□□ 1.82
CPSF4-207ENST00000451876 PDZD7Q9H5P4 517 aa26.42■■□□□ 1.82
CPSF4-207ENST00000451876 SMC2O95347 1197 aa26.41■■□□□ 1.82
CPSF4-207ENST00000451876 UBXN11Q5T124 520 aa26.41■■□□□ 1.82
CPSF4-207ENST00000451876 ATF7IP2Q5U623 682 aa26.41■■□□□ 1.82
CPSF4-207ENST00000451876 RASIP1Q5U651 963 aa26.41■■□□□ 1.82
CPSF4-207ENST00000451876 EEF1DP3Q658K8 133 aa26.41■■□□□ 1.82
CPSF4-207ENST00000451876 TMCO2Q7Z6W1 182 aaPredicted RBP26.41■■□□□ 1.82
CPSF4-207ENST00000451876 GBF1Q92538 1859 aa26.41■■□□□ 1.82
CPSF4-207ENST00000451876 HVCN1Q96D96 273 aa26.41■■□□□ 1.82
CPSF4-207ENST00000451876 ACO2Q99798 780 aaKnown RBP26.41■■□□□ 1.82
CPSF4-207ENST00000451876 GDAQ9Y2T3 454 aa26.41■■□□□ 1.82
CPSF4-207ENST00000451876 PCDHB13Q9Y5F0 798 aa26.41■■□□□ 1.82
CPSF4-207ENST00000451876 NCBP1Q09161 790 aaKnown RBP26.4■■□□□ 1.82
CPSF4-207ENST00000451876 PSMD2Q13200 908 aa26.4■■□□□ 1.82
CPSF4-207ENST00000451876 TMEM132AQ24JP5 1023 aa26.4■■□□□ 1.82
CPSF4-207ENST00000451876 L1TD1Q5T7N2 865 aaKnown RBP26.4■■□□□ 1.82
CPSF4-207ENST00000451876 SCFD1Q8WVM8 642 aa26.4■■□□□ 1.82
CPSF4-207ENST00000451876 CCDC47Q96A33 483 aaKnown RBP26.4■■□□□ 1.82
CPSF4-207ENST00000451876 RNPC3Q96LT9 517 aaKnown RBP26.4■■□□□ 1.82
CPSF4-207ENST00000451876 EIF2AQ9BY44 585 aaKnown RBP26.4■■□□□ 1.82
CPSF4-207ENST00000451876 ZMYM2Q9UBW7 1377 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms