RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 KMT5BQ4FZB7 885 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 ZC2HC1CQ53FD0 456 aaPredicted RBP14.34□□□□□ -0.11
VPS33A-202ENST00000451053 C9orf50Q5SZB4 431 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 PPP4R3CPQ6ZMV5 832 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 RBM43Q6ZSC3 357 aaKnown RBP14.34□□□□□ -0.11
VPS33A-202ENST00000451053 ZNF720Q7Z2F6 126 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 RTN4RL1Q86UN2 441 aaPredicted RBP14.34□□□□□ -0.11
VPS33A-202ENST00000451053 GLIS3Q8NEA6 775 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 CPB2Q96IY4 423 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 GZF1Q9H116 711 aaPredicted RBP14.34□□□□□ -0.11
VPS33A-202ENST00000451053 TMEM134Q9H6X4 195 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 MRPL44Q9H9J2 332 aaKnown RBP14.34□□□□□ -0.11
VPS33A-202ENST00000451053 OLFML3Q9NRN5 406 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 AGPAT5Q9NUQ2 364 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 PRMT7Q9NVM4 692 aaPredicted RBP14.34□□□□□ -0.11
VPS33A-202ENST00000451053 KCNG1Q9UIX4 513 aa14.34□□□□□ -0.11
VPS33A-202ENST00000451053 PIN4Q9Y237 131 aaKnown RBP14.34□□□□□ -0.11
VPS33A-202ENST00000451053 H0YCG3 227 aa14.33□□□□□ -0.12
VPS33A-202ENST00000451053 SMC2O95347 1197 aa14.33□□□□□ -0.12
VPS33A-202ENST00000451053 MYBP10242 640 aa14.33□□□□□ -0.12
VPS33A-202ENST00000451053 ACTN1P12814 892 aa14.33□□□□□ -0.12
VPS33A-202ENST00000451053 ARF4P18085 180 aaPredicted RBP14.33□□□□□ -0.12
VPS33A-202ENST00000451053 HOXA11P31270 313 aaPredicted RBP14.33□□□□□ -0.12
VPS33A-202ENST00000451053 IKBKEQ14164 716 aa14.33□□□□□ -0.12
VPS33A-202ENST00000451053 PCBP1Q15365 356 aaKnown RBP eCLIP14.33□□□□□ -0.12
VPS33A-202ENST00000451053 FAM26FQ5R3K3 315 aa14.33□□□□□ -0.12
VPS33A-202ENST00000451053 NT5DC1Q5TFE4 455 aa14.33□□□□□ -0.12
VPS33A-202ENST00000451053 HERVK_113Q902F9 699 aa14.33□□□□□ -0.12
VPS33A-202ENST00000451053 ADAM2Q99965 735 aa14.33□□□□□ -0.12
VPS33A-202ENST00000451053 STRA6Q9BX79 667 aa14.33□□□□□ -0.12
VPS33A-202ENST00000451053 ST6GALNAC4Q9H4F1 302 aa14.33□□□□□ -0.12
VPS33A-202ENST00000451053 EXOC1Q9NV70 894 aa14.33□□□□□ -0.12
VPS33A-202ENST00000451053 CXXC1Q9P0U4 656 aaPredicted RBP14.33□□□□□ -0.12
VPS33A-202ENST00000451053 CNTNAP2Q9UHC6 1331 aa14.33□□□□□ -0.12
VPS33A-202ENST00000451053 TNRC18O15417 2968 aaPredicted RBP14.33□□□□□ -0.12
VPS33A-202ENST00000451053 ABHD14A-ACY1A0A1B0GW23 586 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.32□□□□□ -0.12
VPS33A-202ENST00000451053 SYCE3A1L190 88 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 ZBBXA8MT70 800 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 ACKR2O00590 384 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 PPP1R37O75864 691 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 BAIAP3O94812 1187 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 GCNT3O95395 438 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 WDR5P61964 334 aaKnown RBP14.32□□□□□ -0.12
VPS33A-202ENST00000451053 GTF2BQ00403 316 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 PRPF4BQ13523 1007 aaKnown RBP14.32□□□□□ -0.12
VPS33A-202ENST00000451053 SHHQ15465 462 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 SASS6Q6UVJ0 657 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 CHRDL2Q6WN34 429 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.32□□□□□ -0.12
VPS33A-202ENST00000451053 CDR2LQ86X02 465 aaPredicted RBP14.32□□□□□ -0.12
VPS33A-202ENST00000451053 SLC17A8Q8NDX2 589 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 KCNN1Q92952 543 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 CCDC47Q96A33 483 aaKnown RBP14.32□□□□□ -0.12
VPS33A-202ENST00000451053 PRIMPOLQ96LW4 560 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 FTHL17Q9BXU8 183 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 TSPYL2Q9H2G4 693 aaPredicted RBP14.32□□□□□ -0.12
VPS33A-202ENST00000451053 SLC39A2Q9NP94 309 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 CHST12Q9NRB3 414 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 KIAA1468Q9P260 1216 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 TBX20Q9UMR3 447 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 PCDHA5Q9Y5H7 936 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 MICAL3Q7RTP6 2002 aa14.32□□□□□ -0.12
VPS33A-202ENST00000451053 ENPP3O14638 875 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 PRPF6O94906 941 aaKnown RBP14.31□□□□□ -0.12
VPS33A-202ENST00000451053 RHOBTB3O94955 611 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 CCDC192P0DO97 292 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 ZSCAN20P17040 1043 aaPredicted RBP14.31□□□□□ -0.12
VPS33A-202ENST00000451053 AXLP30530 894 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 BMP8BP34820 402 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 ZNF445P59923 1031 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 DEFB103AP81534 67 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 KCNA1Q09470 495 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 STRN3Q13033 797 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 STK4Q13043 487 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 UBXN11Q5T124 520 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 RASIP1Q5U651 963 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 EEF1DP3Q658K8 133 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 MAP4K3Q8IVH8 894 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 KIAA0895Q8NCT3 520 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 SPATA20Q8TB22 786 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 SMARCE1Q969G3 411 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 RNPC3Q96LT9 517 aaKnown RBP14.31□□□□□ -0.12
VPS33A-202ENST00000451053 TARS2Q9BW92 718 aaKnown RBP14.31□□□□□ -0.12
VPS33A-202ENST00000451053 IKZF4Q9H2S9 585 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 PRO3102Q9H379 93 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 PDZD7Q9H5P4 517 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 RGS18Q9NS28 235 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 RMND1Q9NWS8 449 aa14.31□□□□□ -0.12
VPS33A-202ENST00000451053 PDE4DIPQ5VU43 2346 aa14.3□□□□□ -0.12
VPS33A-202ENST00000451053 A0A1B0GUA9 196 aa14.3□□□□□ -0.12
VPS33A-202ENST00000451053 C9IYK1 514 aa14.3□□□□□ -0.12
VPS33A-202ENST00000451053 IBSPP21815 317 aaPredicted RBP14.3□□□□□ -0.12
VPS33A-202ENST00000451053 SCP2P22307 547 aa14.3□□□□□ -0.12
VPS33A-202ENST00000451053 SARSP49591 514 aaKnown RBP14.3□□□□□ -0.12
VPS33A-202ENST00000451053 NCBP1Q09161 790 aaKnown RBP14.3□□□□□ -0.12
VPS33A-202ENST00000451053 ALCAMQ13740 583 aa14.3□□□□□ -0.12
VPS33A-202ENST00000451053 KCNB1Q14721 858 aa14.3□□□□□ -0.12
VPS33A-202ENST00000451053 TMEM132AQ24JP5 1023 aa14.3□□□□□ -0.12
VPS33A-202ENST00000451053 L1TD1Q5T7N2 865 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms