RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 EIF4A3P38919 411 aaKnown RBP23■■□□□ 1.27
PTPRF-207ENST00000436724 GNG11P61952 73 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 CBX1P83916 185 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 PPP3CAQ08209 521 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 GRM1Q13255 1194 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 ACVR2BQ13705 512 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 BRDTQ58F21 947 aaPredicted RBP23■■□□□ 1.27
PTPRF-207ENST00000436724 PRAMEF19Q5SWL8 479 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 C1orf220Q5T0J3 134 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 HGSNATQ68CP4 663 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 ERO1AQ96HE7 468 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 CCDC42Q96M95 316 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 ZNF263O14978 683 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 SLU7O95391 586 aaKnown RBP23■■□□□ 1.27
PTPRF-207ENST00000436724 TUBB4AP04350 444 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 EDN1P05305 212 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 ZNF286BP0CG31 522 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 MORN1Q5T089 497 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 SFMBT2Q5VUG0 894 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 C17orf99Q6UX52 265 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 CCDC170Q8IYT3 715 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 ABHD16BQ9H3Z7 469 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 TRIM10Q9UDY6 481 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 ABT1Q9ULW3 272 aaKnown RBP23■■□□□ 1.27
PTPRF-207ENST00000436724 TLL2Q9Y6L7 1015 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 K7ERI5 159 aa22.99■■□□□ 1.27
PTPRF-207ENST00000436724 LRRN2O75325 713 aa22.99■■□□□ 1.27
PTPRF-207ENST00000436724 CYLC1P35663 651 aaPredicted RBP22.99■■□□□ 1.27
PTPRF-207ENST00000436724 ARHGAP25P42331 645 aa22.99■■□□□ 1.27
PTPRF-207ENST00000436724 GCLMP48507 274 aa22.99■■□□□ 1.27
PTPRF-207ENST00000436724 ENOX2Q16206 610 aaKnown RBP22.99■■□□□ 1.27
PTPRF-207ENST00000436724 PPTC7Q8NI37 304 aa22.99■■□□□ 1.27
PTPRF-207ENST00000436724 ERAP1Q9NZ08 941 aa22.99■■□□□ 1.27
PTPRF-207ENST00000436724 FLRT1Q9NZU1 646 aa22.99■■□□□ 1.27
PTPRF-207ENST00000436724 H0YCG3 227 aa22.99■■□□□ 1.27
PTPRF-207ENST00000436724 GJB1P08034 283 aa22.99■■□□□ 1.27
PTPRF-207ENST00000436724 LIG4P49917 911 aa22.99■■□□□ 1.27
PTPRF-207ENST00000436724 SLC26A2P50443 739 aa22.99■■□□□ 1.27
PTPRF-207ENST00000436724 MYL7Q01449 175 aa22.99■■□□□ 1.27
PTPRF-207ENST00000436724 STRN3Q13033 797 aa22.99■■□□□ 1.27
PTPRF-207ENST00000436724 ARHGAP29Q52LW3 1261 aa22.99■■□□□ 1.27
PTPRF-207ENST00000436724 CCDC127Q96BQ5 260 aa22.99■■□□□ 1.27
PTPRF-207ENST00000436724 ZNF668Q96K58 619 aaPredicted RBP22.99■■□□□ 1.27
PTPRF-207ENST00000436724 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.99■■□□□ 1.279e-7■■□□□ 14
PTPRF-207ENST00000436724 V9GYY5 206 aaPredicted RBP22.99■■□□□ 1.27
PTPRF-207ENST00000436724 SPDYE4A6NLX3 237 aa22.98■■□□□ 1.27
PTPRF-207ENST00000436724 IGBP1P78318 339 aa22.98■■□□□ 1.27
PTPRF-207ENST00000436724 MAP2K5Q13163 448 aa22.98■■□□□ 1.27
PTPRF-207ENST00000436724 TDRD12Q587J7 1177 aaKnown RBP22.98■■□□□ 1.27
PTPRF-207ENST00000436724 POP1Q99575 1024 aaKnown RBP22.98■■□□□ 1.27
PTPRF-207ENST00000436724 ZCCHC17Q9NP64 241 aaKnown RBP22.98■■□□□ 1.27
PTPRF-207ENST00000436724 IGKV6-21A0A0C4DH24 114 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 EIF3CLB5ME19 914 aaKnown RBP22.97■■□□□ 1.27
PTPRF-207ENST00000436724 SRGAP2CP0DJJ0 459 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 KIF11P52732 1056 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 DUSP28Q4G0W2 176 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 ZBTB45Q96K62 511 aaPredicted RBP22.97■■□□□ 1.27
PTPRF-207ENST00000436724 EIF3CQ99613 913 aaKnown RBP22.97■■□□□ 1.27
PTPRF-207ENST00000436724 DEF6Q9H4E7 631 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 GPBP1L1Q9HC44 474 aaPredicted RBP22.97■■□□□ 1.27
PTPRF-207ENST00000436724 KCNG1Q9UIX4 513 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 RCCD1A6NED2 376 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 HBP1O60381 514 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 PNMA6AP0CW24 399 aaPredicted RBP22.97■■□□□ 1.27
PTPRF-207ENST00000436724 LAMTOR4Q0VGL1 99 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 CRHR2Q13324 411 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 CCL14Q16627 93 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 IER5Q5VY09 327 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 IQCEQ6IPM2 695 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 SYN2Q92777 582 aaPredicted RBP22.97■■□□□ 1.27
PTPRF-207ENST00000436724 EMID1Q96A84 441 aaPredicted RBP22.97■■□□□ 1.27
PTPRF-207ENST00000436724 SPAG5Q96R06 1193 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 TARS2Q9BW92 718 aaKnown RBP22.97■■□□□ 1.27
PTPRF-207ENST00000436724 HAPLN2Q9GZV7 340 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 ZMYND15Q9H091 742 aa22.97■■□□□ 1.27
PTPRF-207ENST00000436724 NUCKS1Q9H1E3 243 aaKnown RBP22.97■■□□□ 1.27
PTPRF-207ENST00000436724 TTLL13PA6NNM8 815 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 MAPK13O15264 365 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 ADCY3O60266 1144 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 CLCN3P51790 818 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 METTL13Q8N6R0 699 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 FBXL18Q96ME1 805 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 FAM213AQ9BRX8 229 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 INTS2Q9H0H0 1204 aaKnown RBP22.96■■□□□ 1.27
PTPRF-207ENST00000436724 PPME1Q9Y570 386 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 ZNF236Q9UL36 1845 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 PHLPP2Q6ZVD8 1323 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 EVPLQ92817 2033 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 INSRRP14616 1297 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 RHPN2Q8IUC4 686 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 RNF149Q8NC42 400 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 PSPC1Q8WXF1 523 aaKnown RBP22.96■■□□□ 1.27
PTPRF-207ENST00000436724 C16orf70Q9BSU1 422 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 SLC5A4Q9NY91 659 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 AIPL1Q9NZN9 384 aa22.96■■□□□ 1.27
PTPRF-207ENST00000436724 SIP14410 1827 aa22.95■■□□□ 1.26
PTPRF-207ENST00000436724 AKR1B10O60218 316 aa22.95■■□□□ 1.26
PTPRF-207ENST00000436724 CYP2B6P20813 491 aa22.95■■□□□ 1.26
PTPRF-207ENST00000436724 GARTP22102 1010 aa22.95■■□□□ 1.26
PTPRF-207ENST00000436724 INHBEP58166 350 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms