RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 SH3TC2Q8TF17 1288 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 FAM167AQ96KS9 214 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 MED15Q96RN5 788 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 FGFBP2Q9BYJ0 223 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 RBCK1Q9BYM8 510 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 DHX33Q9H6R0 707 aaKnown RBP7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 SLC39A2Q9NP94 309 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 GPRC5CQ9NQ84 441 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 XPNPEP3Q9NQH7 507 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 XPNPEP1Q9NQW7 623 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 EXOC1Q9NV70 894 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 DDX20Q9UHI6 824 aaKnown RBP7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 ODF2LQ9ULJ1 636 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 IGKV6-21A0A0C4DH24 114 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 HAS3O00219 553 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 TBCAO75347 108 aaKnown RBP7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 MAFO75444 373 aaPredicted RBP7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 DGAT1O75907 488 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 F2P00734 622 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 MYL3P08590 195 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 C6orf222P0C671 652 aaPredicted RBP7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 INSRRP14616 1297 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 GAP43P17677 238 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 PRCPP42785 496 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 ZNF165P49910 485 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 CASP5P51878 434 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 PURAQ00577 322 aaKnown RBP7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 MTMR3Q13615 1198 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 NAA30Q147X3 362 aaPredicted RBP7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 EMC2Q15006 297 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 IQCB1Q15051 598 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 LRRC41Q15345 812 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 COBLL1Q53SF7 1204 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 ZNF484Q5JVG2 852 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 GNASQ5JWF2 1037 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 FAM26FQ5R3K3 315 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 MARCH8Q5T0T0 291 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 C16orf46Q6P387 395 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 ADSSL1Q8N142 457 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 MYCT1Q8N699 235 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 KIAA0895Q8NCT3 520 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 RNF214Q8ND24 703 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 KLHDC9Q8NEP7 349 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 TRAPPC12Q8WVT3 735 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 BSNDQ8WZ55 320 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 CCDC47Q96A33 483 aaKnown RBP7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 ZBTB10Q96DT7 871 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 CCDC43Q96MW1 224 aaKnown RBP7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 CITED4Q96RK1 184 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 FIZ1Q96SL8 496 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 TIPINQ9BVW5 301 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 TSPAN10Q9H1Z9 355 aaPredicted RBP7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 ZHX3Q9H4I2 956 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 ETNK1Q9HBU6 452 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 CBX8Q9HC52 389 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 TMPRSS4Q9NRS4 437 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 TBC1D7Q9P0N9 293 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 MAPK8IP1Q9UQF2 711 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 PPME1Q9Y570 386 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 COL4A3BPQ9Y5P4 624 aa7.77□□□□□ -1.17
LSM3P3-201ENST00000436601 NDUFB5O43674 189 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 KPNA6O60684 536 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 LILRA1O75019 489 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 C22orf31O95567 290 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 CAVIN2O95810 425 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 ADH1CP00326 375 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 HSPA1AP0DMV8 641 aaKnown RBP7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 HSPA1BP0DMV9 641 aaKnown RBP7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 MYBP10242 640 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 PLS3P13797 630 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 KLRC1P26715 233 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 CST5P28325 142 aaPredicted RBP7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 ERCC5P28715 1186 aaPredicted RBP7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 NMT1P30419 496 aaKnown RBP7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 ARL2P36404 184 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 LBX1P52954 281 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 POLGP54098 1239 aaPredicted RBP7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 RTP1P59025 263 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 FOXK2Q01167 660 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 DRP2Q13474 957 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 NCAPHQ15003 741 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 MTFR1Q15390 333 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 KIAA0753Q2KHM9 967 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 BRDTQ58F21 947 aaPredicted RBP7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 CT47A1Q5JQC4 288 aaPredicted RBP7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 ODR4Q5SWX8 454 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 FAM102BQ5T8I3 360 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 CXCL17Q6UXB2 119 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 EPM2AIP1Q7L775 607 aaPredicted RBP7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 ZNF720Q7Z2F6 126 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 LUZP1Q86V48 1076 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 DHX40Q8IX18 779 aaKnown RBP7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 MCPH1Q8NEM0 835 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 PPP1R13LQ8WUF5 828 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 SCFD1Q8WVM8 642 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 SLC7A3Q8WY07 619 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 TMEM143Q96AN5 459 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 DRC1Q96MC2 740 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 BPIFA3Q9BQP9 254 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 NTPCRQ9BSD7 190 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms