RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 FSCN2O14926 492 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 PBX3P40426 434 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 NRIP1P48552 1158 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 RNASELQ05823 741 aaKnown RBP11.93□□□□□ -0.5
LINC01238-202ENST00000426962 IL17AQ16552 155 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 AMHR2Q16671 573 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 KRT79Q5XKE5 535 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 AGMOQ6ZNB7 445 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 RBM23Q86U06 439 aaKnown RBP11.93□□□□□ -0.5
LINC01238-202ENST00000426962 SLC39A11Q8N1S5 342 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 EFHBQ8N7U6 833 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 SMG8Q8ND04 991 aaKnown RBP11.93□□□□□ -0.5
LINC01238-202ENST00000426962 URGCPQ8TCY9 931 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 SNX29Q8TEQ0 813 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 CPB2Q96IY4 423 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 CDCA3Q99618 268 aaPredicted RBP11.93□□□□□ -0.5
LINC01238-202ENST00000426962 CSRNP2Q9H175 543 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 NRDE2Q9H7Z3 1164 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 RSAD1Q9HA92 442 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 NGRNQ9NPE2 291 aaKnown RBP11.93□□□□□ -0.5
LINC01238-202ENST00000426962 DDX19AQ9NUU7 478 aaKnown RBP11.93□□□□□ -0.5
LINC01238-202ENST00000426962 TBC1D13Q9NVG8 400 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 DNM3Q9UQ16 869 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 FAM50BQ9Y247 325 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 INPP5FQ9Y2H2 1132 aa11.93□□□□□ -0.5
LINC01238-202ENST00000426962 TCF20Q9UGU0 1960 aaKnown RBP11.92□□□□□ -0.5
LINC01238-202ENST00000426962 A0A1B0GUA9 196 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 FSD2A1L4K1 749 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 NT5C1B-RDH14C9J2C7 533 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 PER2O15055 1255 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 LINC01565O15544 149 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 ZC3H11AO75152 810 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC01238-202ENST00000426962 ALDH2P05091 517 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 GALTP07902 379 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 ITGA4P13612 1032 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 ARF4P18085 180 aaPredicted RBP11.92□□□□□ -0.5
LINC01238-202ENST00000426962 ATP2C1P98194 919 aaPredicted RBP11.92□□□□□ -0.5
LINC01238-202ENST00000426962 DLX2Q07687 328 aaPredicted RBP11.92□□□□□ -0.5
LINC01238-202ENST00000426962 BMS1Q14692 1282 aaKnown RBP11.92□□□□□ -0.5
LINC01238-202ENST00000426962 FAM187BQ17R55 369 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 ARL6IP4Q66PJ3 421 aaKnown RBP11.92□□□□□ -0.5
LINC01238-202ENST00000426962 TMC7Q7Z402 723 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 ZBTB8OSQ8IWT0 167 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 FAM178BQ8IXR5 827 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 PRIMPOLQ96LW4 560 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 TCF25Q9BQ70 676 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 EIF2AQ9BY44 585 aaKnown RBP11.92□□□□□ -0.5
LINC01238-202ENST00000426962 C2orf40Q9H1Z8 148 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 BHMT2Q9H2M3 363 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 FZD8Q9H461 694 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 PRMT7Q9NVM4 692 aaPredicted RBP11.92□□□□□ -0.5
LINC01238-202ENST00000426962 IPPQ9Y573 584 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 PCDHGC5Q9Y5F6 944 aa11.92□□□□□ -0.5
LINC01238-202ENST00000426962 MYO7AQ13402 2215 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 EYA4O95677 639 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 IL9P15248 144 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 CDC25AP30304 524 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 NAMPTP43490 491 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 NDUFV1P49821 464 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 PPP2R5AQ15172 486 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 CDCA2Q69YH5 1023 aaPredicted RBP11.91□□□□□ -0.5
LINC01238-202ENST00000426962 SLC27A1Q6PCB7 646 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 PPP4R3CPQ6ZMV5 832 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 ZNF280BQ86YH2 543 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 HACE1Q8IYU2 909 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 KCTD17Q8N5Z5 321 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 MRPL43Q8N983 215 aaKnown RBP11.91□□□□□ -0.5
LINC01238-202ENST00000426962 KIFAP3Q92845 792 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 TMEM169Q96HH4 297 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 IFT74Q96LB3 600 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 FAM193BQ96PV7 902 aaPredicted RBP11.91□□□□□ -0.5
LINC01238-202ENST00000426962 TRIM6Q9C030 488 aaPredicted RBP11.91□□□□□ -0.5
LINC01238-202ENST00000426962 ENTPD7Q9NQZ7 604 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 CD207Q9UJ71 328 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 GIT1Q9Y2X7 761 aa11.91□□□□□ -0.5
LINC01238-202ENST00000426962 KIAA1671Q9BY89 1806 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 PP2D1A8MPX8 630 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 E9PMD0 336 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 B4GALT5O43286 388 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 MBTPS2O43462 519 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 TBX10O75333 385 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 DDHD2O94830 711 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 CXCL14O95715 111 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 POMCP01189 267 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 PDCP20941 246 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 AFF1P51825 1210 aaKnown RBP11.9□□□□□ -0.5
LINC01238-202ENST00000426962 SMC1AQ14683 1233 aaKnown RBP11.9□□□□□ -0.5
LINC01238-202ENST00000426962 MAPK6Q16659 721 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 DUSP6Q16828 381 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 PLPP4Q5VZY2 271 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 TMEM184AQ6ZMB5 413 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 BRAPQ7Z569 592 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 DDX53Q86TM3 631 aaKnown RBP11.9□□□□□ -0.5
LINC01238-202ENST00000426962 VPS52Q8N1B4 723 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 DEPTORQ8TB45 409 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 BSNDQ8WZ55 320 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 IGSF21Q96ID5 467 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 MSLNLQ96KJ4 702 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 TMEM175Q9BSA9 504 aa11.9□□□□□ -0.5
LINC01238-202ENST00000426962 MMTAG2Q9BU76 263 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms