RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 STRN3Q13033 797 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 ADAM9Q13443 819 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 KRT31Q15323 416 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 SARM1Q6SZW1 724 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 IFNLR1Q8IU57 520 aaPredicted RBP10.61□□□□□ -0.71
RIF1-202ENST00000414861 ZBTB8OSQ8IWT0 167 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 U2AF1L4Q8WU68 220 aaKnown RBP10.61□□□□□ -0.71
RIF1-202ENST00000414861 BICD1Q96G01 975 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 SCLT1Q96NL6 688 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 OSMRQ99650 979 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 TARS2Q9BW92 718 aaKnown RBP10.61□□□□□ -0.71
RIF1-202ENST00000414861 INO80BQ9C086 356 aaPredicted RBP10.61□□□□□ -0.71
RIF1-202ENST00000414861 HAPLN2Q9GZV7 340 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 CRISPLD2Q9H0B8 497 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 C2orf40Q9H1Z8 148 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 PCIF1Q9H4Z3 704 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 INTS13Q9NVM9 706 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 KCNG1Q9UIX4 513 aa10.61□□□□□ -0.71
RIF1-202ENST00000414861 AKAP3O75969 853 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 CDK11BP21127 795 aaKnown RBP10.6□□□□□ -0.71
RIF1-202ENST00000414861 PTGISQ16647 500 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 NFIL3Q16649 462 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 MAPK6Q16659 721 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 PTPN21Q16825 1174 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 TAF2Q6P1X5 1199 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 ZNF410Q86VK4 478 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 CREBRFQ8IUR6 639 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 SLC43A3Q8NBI5 491 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 NOC3LQ8WTT2 800 aaKnown RBP10.6□□□□□ -0.71
RIF1-202ENST00000414861 TMEM40Q8WWA1 233 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 DHX38Q92620 1227 aaKnown RBP10.6□□□□□ -0.71
RIF1-202ENST00000414861 ZBTB45Q96K62 511 aaPredicted RBP10.6□□□□□ -0.71
RIF1-202ENST00000414861 NAP1L5Q96NT1 182 aaPredicted RBP10.6□□□□□ -0.71
RIF1-202ENST00000414861 DMAC2Q9NW81 257 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 TAB2Q9NYJ8 693 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 IFNKQ9P0W0 207 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 EXOC7Q9UPT5 735 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 ADCY5O95622 1261 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 PIGRP01833 764 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 FGFR4P22455 802 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 LIG4P49917 911 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 POU5F1BQ06416 359 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 AMHR2Q16671 573 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 CEP135Q66GS9 1140 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 ARMCX5Q6P1M9 558 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 DIS3LQ8TF46 1054 aaKnown RBP10.6□□□□□ -0.71
RIF1-202ENST00000414861 CEP63Q96MT8 703 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 TRIM5Q9C035 493 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 XPO4Q9C0E2 1151 aaKnown RBP10.6□□□□□ -0.71
RIF1-202ENST00000414861 FZD8Q9H461 694 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 HSPBP1Q9NZL4 362 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 ANKFY1Q9P2R3 1169 aa10.6□□□□□ -0.71
RIF1-202ENST00000414861 A0A0U1RQG5 324 aaPredicted RBP10.59□□□□□ -0.71
RIF1-202ENST00000414861 CETN3O15182 167 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 B4GALT4O60513 344 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 SGPL1O95470 568 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 SERPINC1P01008 464 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 CTSHP09668 335 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 ZNF75DP51815 510 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 CDR2LQ86X02 465 aaPredicted RBP10.59□□□□□ -0.71
RIF1-202ENST00000414861 C12orf56Q8IXR9 622 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 GOLGA5Q8TBA6 731 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 SAAL1Q96ER3 474 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 TRPV6Q9H1D0 765 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 LIMA1Q9UHB6 759 aaKnown RBP10.59□□□□□ -0.71
RIF1-202ENST00000414861 ACKR2O00590 384 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 ABLIM1O14639 778 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 SCP2P22307 547 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 EEF1GP26641 437 aaKnown RBP10.59□□□□□ -0.71
RIF1-202ENST00000414861 ABCD1P33897 745 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 SNX17Q15036 470 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 FILIP1Q7Z7B0 1213 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 SLC9A9Q8IVB4 645 aa10.59□□□□□ -0.71
RIF1-202ENST00000414861 ACO2Q99798 780 aaKnown RBP10.59□□□□□ -0.71
RIF1-202ENST00000414861 MRPL4Q9BYD3 311 aaKnown RBP10.59□□□□□ -0.71
RIF1-202ENST00000414861 GOLGA8IPA6NC78 632 aa10.58□□□□□ -0.72
RIF1-202ENST00000414861 GOLGA8JA6NMD2 632 aa10.58□□□□□ -0.72
RIF1-202ENST00000414861 ARVCFO00192 962 aa10.58□□□□□ -0.72
RIF1-202ENST00000414861 FGFR1OPO95684 399 aaKnown RBP10.58□□□□□ -0.72
RIF1-202ENST00000414861 ADRB2P07550 413 aa10.58□□□□□ -0.72
RIF1-202ENST00000414861 DARSP14868 501 aaKnown RBP10.58□□□□□ -0.72
RIF1-202ENST00000414861 RPL13P26373 211 aaKnown RBP10.58□□□□□ -0.72
RIF1-202ENST00000414861 COPB1P53618 953 aaKnown RBP10.58□□□□□ -0.72
RIF1-202ENST00000414861 MRPS6P82932 125 aaKnown RBP10.58□□□□□ -0.72
RIF1-202ENST00000414861 PTPN11Q06124 597 aaPredicted RBP10.58□□□□□ -0.72
RIF1-202ENST00000414861 SPAG1Q07617 926 aa10.58□□□□□ -0.72
RIF1-202ENST00000414861 PRPF4BQ13523 1007 aaKnown RBP10.58□□□□□ -0.72
RIF1-202ENST00000414861 FAM187BQ17R55 369 aa10.58□□□□□ -0.72
RIF1-202ENST00000414861 TRIM71Q2Q1W2 868 aaKnown RBP10.58□□□□□ -0.72
RIF1-202ENST00000414861 CCDC40Q4G0X9 1142 aa10.58□□□□□ -0.72
RIF1-202ENST00000414861 MIIPQ5JXC2 388 aa10.58□□□□□ -0.72
RIF1-202ENST00000414861 ZBTB41Q5SVQ8 909 aa10.58□□□□□ -0.72
RIF1-202ENST00000414861 EEF1DP3Q658K8 133 aa10.58□□□□□ -0.72
RIF1-202ENST00000414861 FAM114A1Q8IWE2 563 aa10.58□□□□□ -0.72
RIF1-202ENST00000414861 TMEM174Q8WUU8 243 aa10.58□□□□□ -0.72
RIF1-202ENST00000414861 POMGNT1Q8WZA1 660 aa10.58□□□□□ -0.72
RIF1-202ENST00000414861 TUBGCP2Q9BSJ2 902 aa10.58□□□□□ -0.72
RIF1-202ENST00000414861 OSBPL7Q9BZF2 842 aa10.58□□□□□ -0.72
RIF1-202ENST00000414861 PRMT7Q9NVM4 692 aaPredicted RBP10.58□□□□□ -0.72
RIF1-202ENST00000414861 MAGEC2Q9UBF1 373 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms