RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 PLEKHG4Q58EX7 1191 aa16.73■□□□□ 0.27
LSM5-207ENST00000410044 FAM228AQ86W67 206 aa16.73■□□□□ 0.27
LSM5-207ENST00000410044 MAP4K3Q8IVH8 894 aa16.73■□□□□ 0.27
LSM5-207ENST00000410044 MYOCDQ8IZQ8 938 aa16.73■□□□□ 0.27
LSM5-207ENST00000410044 TMEM206Q9H813 350 aa16.73■□□□□ 0.27
LSM5-207ENST00000410044 ST3GAL5Q9UNP4 418 aa16.73■□□□□ 0.27
LSM5-207ENST00000410044 GDAQ9Y2T3 454 aa16.73■□□□□ 0.27
LSM5-207ENST00000410044 SCN5AQ14524 2016 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 CSDE1O75534 798 aaKnown RBP16.72■□□□□ 0.27
LSM5-207ENST00000410044 PRPF6O94906 941 aaKnown RBP16.72■□□□□ 0.27
LSM5-207ENST00000410044 PRKCBP05771 671 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 HOXA11P31270 313 aaPredicted RBP16.72■□□□□ 0.27
LSM5-207ENST00000410044 PRCPP42785 496 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 CCL23P55773 120 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 SNRPFP62306 86 aaKnown RBP16.72■□□□□ 0.27
LSM5-207ENST00000410044 STRN3Q13033 797 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 CT47A1Q5JQC4 288 aaPredicted RBP16.72■□□□□ 0.27
LSM5-207ENST00000410044 ZPBP2Q6X784 338 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 C7orf61Q8IZ16 206 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 ADSSL1Q8N142 457 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 TMEM199Q8N511 208 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 MLKLQ8NB16 471 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 DPF3Q92784 378 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 VWCEQ96DN2 955 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 ACCSQ96QU6 501 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 PRDM5Q9NQX1 630 aaPredicted RBP16.72■□□□□ 0.27
LSM5-207ENST00000410044 CHST12Q9NRB3 414 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 PRKAG2Q9UGJ0 569 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 PADI3Q9ULW8 664 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 EXOC7Q9UPT5 735 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 TET1Q8NFU7 2136 aa16.72■□□□□ 0.27
LSM5-207ENST00000410044 A0A1B0GUA9 196 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 PPP1R3GB7ZBB8 358 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 BIN1O00499 593 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 TSPAN1O60635 241 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 EDN1P05305 212 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 GHRP10912 638 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 KCNA1Q09470 495 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 KNOP1Q1ED39 458 aaKnown RBP16.71■□□□□ 0.27
LSM5-207ENST00000410044 ISM2Q6H9L7 571 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 SASS6Q6UVJ0 657 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 CATSPER4Q7RTX7 472 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 TMEM174Q8WUU8 243 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 APBB2Q92870 758 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 SCLYQ96I15 445 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 ACO2Q99798 780 aaKnown RBP16.71■□□□□ 0.27
LSM5-207ENST00000410044 MRPL4Q9BYD3 311 aaKnown RBP16.71■□□□□ 0.27
LSM5-207ENST00000410044 PTPRHQ9HD43 1115 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 AGPAT5Q9NUQ2 364 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 TNFSF13BQ9Y275 285 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 STYXL1Q9Y6J8 313 aa16.71■□□□□ 0.27
LSM5-207ENST00000410044 CNTNAP2Q9UHC6 1331 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 MKI67P46013 3256 aaKnown RBP16.7■□□□□ 0.26
LSM5-207ENST00000410044 ERLIN2O94905 339 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 PFKMP08237 780 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 ARF4P18085 180 aaPredicted RBP16.7■□□□□ 0.26
LSM5-207ENST00000410044 FGFR4P22455 802 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 PROZP22891 400 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 CD52P31358 61 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 NCBP1Q09161 790 aaKnown RBP16.7■□□□□ 0.26
LSM5-207ENST00000410044 PAK2Q13177 524 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 PRPF4BQ13523 1007 aaKnown RBP16.7■□□□□ 0.26
LSM5-207ENST00000410044 DSC3Q14574 896 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 ZSCAN23Q3MJ62 389 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 CENPPQ6IPU0 288 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 FOXR2Q6PJQ5 311 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 RPUSD2Q8IZ73 545 aaKnown RBP16.7■□□□□ 0.26
LSM5-207ENST00000410044 DHTKD1Q96HY7 919 aaPredicted RBP16.7■□□□□ 0.26
LSM5-207ENST00000410044 FUCA2Q9BTY2 467 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 TRAIPQ9BWF2 469 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 KCTD10Q9H3F6 313 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 CGNQ9P2M7 1197 aaKnown RBP16.7■□□□□ 0.26
LSM5-207ENST00000410044 NR2E3Q9Y5X4 410 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 LTBP2Q14767 1821 aa16.7■□□□□ 0.26
LSM5-207ENST00000410044 TTLL13PA6NNM8 815 aa16.69■□□□□ 0.26
LSM5-207ENST00000410044 PDXKO00764 312 aa16.69■□□□□ 0.26
LSM5-207ENST00000410044 TGFB1I1O43294 461 aa16.69■□□□□ 0.26
LSM5-207ENST00000410044 CD44P16070 742 aaKnown RBP16.69■□□□□ 0.26
LSM5-207ENST00000410044 NFX1Q12986 1120 aaKnown RBP16.69■□□□□ 0.26
LSM5-207ENST00000410044 STIM1Q13586 685 aa16.69■□□□□ 0.26
LSM5-207ENST00000410044 SMYD4Q8IYR2 804 aaPredicted RBP16.69■□□□□ 0.26
LSM5-207ENST00000410044 DBF4BQ8NFT6 615 aa16.69■□□□□ 0.26
LSM5-207ENST00000410044 SEPT8Q92599 483 aa16.69■□□□□ 0.26
LSM5-207ENST00000410044 CCDC51Q96ER9 411 aa16.69■□□□□ 0.26
LSM5-207ENST00000410044 TARS2Q9BW92 718 aaKnown RBP16.69■□□□□ 0.26
LSM5-207ENST00000410044 FTHL17Q9BXU8 183 aa16.69■□□□□ 0.26
LSM5-207ENST00000410044 IFIH1Q9BYX4 1025 aaKnown RBP16.69■□□□□ 0.26
LSM5-207ENST00000410044 GBP3Q9H0R5 595 aa16.69■□□□□ 0.26
LSM5-207ENST00000410044 TMX1Q9H3N1 280 aa16.69■□□□□ 0.26
LSM5-207ENST00000410044 TRAF3IP3Q9Y228 551 aa16.69■□□□□ 0.26
LSM5-207ENST00000410044 ABLIM1O14639 778 aa16.68■□□□□ 0.26
LSM5-207ENST00000410044 B4GALT5O43286 388 aa16.68■□□□□ 0.26
LSM5-207ENST00000410044 TOM1L1O75674 476 aa16.68■□□□□ 0.26
LSM5-207ENST00000410044 CSF2RAP15509 400 aa16.68■□□□□ 0.26
LSM5-207ENST00000410044 NFIL3Q16649 462 aa16.68■□□□□ 0.26
LSM5-207ENST00000410044 ATF7IP2Q5U623 682 aa16.68■□□□□ 0.26
LSM5-207ENST00000410044 SLFN12LQ6IEE8 588 aa16.68■□□□□ 0.26
LSM5-207ENST00000410044 SLC39A4Q6P5W5 647 aa16.68■□□□□ 0.26
LSM5-207ENST00000410044 NOTUMQ6P988 496 aa16.68■□□□□ 0.26
LSM5-207ENST00000410044 RTN4RL1Q86UN2 441 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms