RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 ZNF365Q70YC5 407 aa16.66■□□□□ 0.26
SNRNP27-202ENST00000409116 OTOP2Q7RTS6 562 aa16.66■□□□□ 0.26
SNRNP27-202ENST00000409116 LINC01599Q8WXQ3 324 aa16.66■□□□□ 0.26
SNRNP27-202ENST00000409116 CPB2Q96IY4 423 aa16.66■□□□□ 0.26
SNRNP27-202ENST00000409116 GDF15Q99988 308 aa16.66■□□□□ 0.26
SNRNP27-202ENST00000409116 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.66■□□□□ 0.261e-8■■□□□ 13.2
SNRNP27-202ENST00000409116 TMEM134Q9H6X4 195 aa16.66■□□□□ 0.26
SNRNP27-202ENST00000409116 SLC39A2Q9NP94 309 aa16.66■□□□□ 0.26
SNRNP27-202ENST00000409116 AGPAT5Q9NUQ2 364 aa16.66■□□□□ 0.26
SNRNP27-202ENST00000409116 PCDHA5Q9Y5H7 936 aa16.66■□□□□ 0.26
SNRNP27-202ENST00000409116 CNTNAP2Q9UHC6 1331 aa16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 H0YCG3 227 aa16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 SMC2O95347 1197 aa16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 FGBP02675 491 aa16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 PRPF4BQ13523 1007 aaKnown RBP16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 DSC3Q14574 896 aa16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 FAM187BQ17R55 369 aa16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 TMEM132AQ24JP5 1023 aa16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 NT5DC1Q5TFE4 455 aa16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 PSRC1Q6PGN9 363 aaPredicted RBP16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 ZNF720Q7Z2F6 126 aa16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 ELOA2Q8IYF1 753 aaPredicted RBP16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 APBB2Q92870 758 aa16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 SMARCE1Q969G3 411 aa16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 UBE2OQ9C0C9 1292 aaKnown RBP16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 NUP62CLQ9H1M0 184 aa16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 KCNG1Q9UIX4 513 aa16.65■□□□□ 0.26
SNRNP27-202ENST00000409116 ACKR2O00590 384 aa16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 PPP1R37O75864 691 aa16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 ACTN1P12814 892 aa16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 ARF4P18085 180 aaPredicted RBP16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 IBSPP21815 317 aaPredicted RBP16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 HOXA11P31270 313 aaPredicted RBP16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 GTF2BQ00403 316 aa16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 KCNA1Q09470 495 aa16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 STRN3Q13033 797 aa16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 IKBKEQ14164 716 aa16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 C9orf50Q5SZB4 431 aa16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 RTN4RL1Q86UN2 441 aaPredicted RBP16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 CDR2LQ86X02 465 aaPredicted RBP16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 SPATA20Q8TB22 786 aa16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 CCDC47Q96A33 483 aaKnown RBP16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 ADAM2Q99965 735 aa16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 TARS2Q9BW92 718 aaKnown RBP16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 STRA6Q9BX79 667 aa16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 IKZF4Q9H2S9 585 aa16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 ST6GALNAC4Q9H4F1 302 aa16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 TBX20Q9UMR3 447 aa16.64■□□□□ 0.25
SNRNP27-202ENST00000409116 ZBBXA8MT70 800 aa16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 BIN1O00499 593 aa16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 PRPF6O94906 941 aaKnown RBP16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 RHOBTB3O94955 611 aa16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 NCBP1Q09161 790 aaKnown RBP16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 STK4Q13043 487 aa16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 KCNB1Q14721 858 aa16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 ISM2Q6H9L7 571 aa16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 TWF2Q6IBS0 349 aaKnown RBP16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 KIAA0895Q8NCT3 520 aa16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 SLC17A8Q8NDX2 589 aa16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 BICD1Q96G01 975 aa16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 PRIMPOLQ96LW4 560 aa16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 MRPL4Q9BYD3 311 aaKnown RBP16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 CXXC1Q9P0U4 656 aaPredicted RBP16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 GDAQ9Y2T3 454 aa16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 PCDHB13Q9Y5F0 798 aa16.63■□□□□ 0.25
SNRNP27-202ENST00000409116 ABHD14A-ACY1A0A1B0GW23 586 aa16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 SARSP49591 514 aaKnown RBP16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 PCBP1Q15365 356 aaKnown RBP eCLIP16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 SHHQ15465 462 aa16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 L1TD1Q5T7N2 865 aaKnown RBP16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 ATF7IP2Q5U623 682 aa16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 EEF1DP3Q658K8 133 aa16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 NOTUMQ6P988 496 aa16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 EPM2AIP1Q7L775 607 aaPredicted RBP16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 MAP4K3Q8IVH8 894 aa16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 SMYD4Q8IYR2 804 aaPredicted RBP16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 KCNN1Q92952 543 aa16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 HVCN1Q96D96 273 aa16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 GSDMAQ96QA5 445 aa16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 ACO2Q99798 780 aaKnown RBP16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 FTHL17Q9BXU8 183 aa16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 TSPYL2Q9H2G4 693 aaPredicted RBP16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 PDZD7Q9H5P4 517 aa16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 RMND1Q9NWS8 449 aa16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 MAN1B1Q9UKM7 699 aa16.62■□□□□ 0.25
SNRNP27-202ENST00000409116 TISP43B9A030 160 aa16.61■□□□□ 0.25
SNRNP27-202ENST00000409116 ENPP3O14638 875 aa16.61■□□□□ 0.25
SNRNP27-202ENST00000409116 BAIAP3O94812 1187 aa16.61■□□□□ 0.25
SNRNP27-202ENST00000409116 ZSCAN20P17040 1043 aaPredicted RBP16.61■□□□□ 0.25
SNRNP27-202ENST00000409116 SCP2P22307 547 aa16.61■□□□□ 0.25
SNRNP27-202ENST00000409116 AXLP30530 894 aa16.61■□□□□ 0.25
SNRNP27-202ENST00000409116 HOXD13P35453 343 aa16.61■□□□□ 0.25
SNRNP27-202ENST00000409116 WDR5P61964 334 aaKnown RBP16.61■□□□□ 0.25
SNRNP27-202ENST00000409116 DEFB103AP81534 67 aa16.61■□□□□ 0.25
SNRNP27-202ENST00000409116 PSMD2Q13200 908 aa16.61■□□□□ 0.25
SNRNP27-202ENST00000409116 ALCAMQ13740 583 aa16.61■□□□□ 0.25
SNRNP27-202ENST00000409116 NFKBIBQ15653 356 aa16.61■□□□□ 0.25
SNRNP27-202ENST00000409116 CHRDL2Q6WN34 429 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms