RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 PHLPP2Q6ZVD8 1323 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 K7ENM7 598 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 ENPP3O14638 875 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 TSPAN1O60635 241 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 PPP1R37O75864 691 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 SMC2O95347 1197 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 CASP5P51878 434 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 STK4Q13043 487 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 IKBKEQ14164 716 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 FAM26FQ5R3K3 315 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 TMEM240Q5SV17 173 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 NT5DC1Q5TFE4 455 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 GSDMAQ96QA5 445 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.02■□□□□ 0.321e-9■■■■□ 25.1
PDGFB-202ENST00000381551 FTHL17Q9BXU8 183 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 FGFBP2Q9BYJ0 223 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 AGPAT5Q9NUQ2 364 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 TBX20Q9UMR3 447 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 PCDHB13Q9Y5F0 798 aa17.02■□□□□ 0.32
PDGFB-202ENST00000381551 CEP290O15078 2479 aa17.02■□□□□ 0.31
PDGFB-202ENST00000381551 A0A1B0GUA9 196 aa17.01■□□□□ 0.31
PDGFB-202ENST00000381551 TTLL13PA6NNM8 815 aa17.01■□□□□ 0.31
PDGFB-202ENST00000381551 B4GALT5O43286 388 aa17.01■□□□□ 0.31
PDGFB-202ENST00000381551 ERLIN2O94905 339 aa17.01■□□□□ 0.31
PDGFB-202ENST00000381551 RHOBTB3O94955 611 aa17.01■□□□□ 0.31
PDGFB-202ENST00000381551 EDN1P05305 212 aa17.01■□□□□ 0.31
PDGFB-202ENST00000381551 PRKCBP05771 671 aa17.01■□□□□ 0.31
PDGFB-202ENST00000381551 ARF4P18085 180 aaPredicted RBP17.01■□□□□ 0.31
PDGFB-202ENST00000381551 PTMSP20962 102 aa17.01■□□□□ 0.31
PDGFB-202ENST00000381551 ABCD1P33897 745 aa17.01■□□□□ 0.31
PDGFB-202ENST00000381551 NCBP1Q09161 790 aaKnown RBP17.01■□□□□ 0.31
PDGFB-202ENST00000381551 PRPF4BQ13523 1007 aaKnown RBP17.01■□□□□ 0.31
PDGFB-202ENST00000381551 DSC3Q14574 896 aa17.01■□□□□ 0.31
PDGFB-202ENST00000381551 PRPF38BQ5VTL8 546 aaKnown RBP17.01■□□□□ 0.31
PDGFB-202ENST00000381551 EPM2AIP1Q7L775 607 aaPredicted RBP17.01■□□□□ 0.31
PDGFB-202ENST00000381551 GLIS3Q8NEA6 775 aa17.01■□□□□ 0.31
PDGFB-202ENST00000381551 SMARCE1Q969G3 411 aa17.01■□□□□ 0.31
PDGFB-202ENST00000381551 CCDC47Q96A33 483 aaKnown RBP17.01■□□□□ 0.31
PDGFB-202ENST00000381551 SLC39A2Q9NP94 309 aa17.01■□□□□ 0.31
PDGFB-202ENST00000381551 EXOC1Q9NV70 894 aa17.01■□□□□ 0.31
PDGFB-202ENST00000381551 USP20Q9Y2K6 914 aa17.01■□□□□ 0.31
PDGFB-202ENST00000381551 ABHD14A-ACY1A0A1B0GW23 586 aa17■□□□□ 0.31
PDGFB-202ENST00000381551 MGEA5O60502 916 aa17■□□□□ 0.31
PDGFB-202ENST00000381551 GCNT3O95395 438 aa17■□□□□ 0.31
PDGFB-202ENST00000381551 MYBP10242 640 aa17■□□□□ 0.31
PDGFB-202ENST00000381551 ACTN1P12814 892 aa17■□□□□ 0.31
PDGFB-202ENST00000381551 ZSCAN20P17040 1043 aaPredicted RBP17■□□□□ 0.31
PDGFB-202ENST00000381551 AXLP30530 894 aa17■□□□□ 0.31
PDGFB-202ENST00000381551 STRN3Q13033 797 aa17■□□□□ 0.31
PDGFB-202ENST00000381551 ALCAMQ13740 583 aa17■□□□□ 0.31
PDGFB-202ENST00000381551 PSRC1Q6PGN9 363 aaPredicted RBP17■□□□□ 0.31
PDGFB-202ENST00000381551 OTOP2Q7RTS6 562 aa17■□□□□ 0.31
PDGFB-202ENST00000381551 ZNF507Q8TCN5 953 aa17■□□□□ 0.31
PDGFB-202ENST00000381551 NUP62CLQ9H1M0 184 aa17■□□□□ 0.31
PDGFB-202ENST00000381551 TSPYL2Q9H2G4 693 aaPredicted RBP17■□□□□ 0.31
PDGFB-202ENST00000381551 RGS18Q9NS28 235 aa17■□□□□ 0.31
PDGFB-202ENST00000381551 RMND1Q9NWS8 449 aa17■□□□□ 0.31
PDGFB-202ENST00000381551 KIAA1468Q9P260 1216 aa17■□□□□ 0.31
PDGFB-202ENST00000381551 CNTNAP2Q9UHC6 1331 aa16.99■□□□□ 0.31
PDGFB-202ENST00000381551 PRPF6O94906 941 aaKnown RBP16.99■□□□□ 0.31
PDGFB-202ENST00000381551 BMP8BP34820 402 aa16.99■□□□□ 0.31
PDGFB-202ENST00000381551 HOXD13P35453 343 aa16.99■□□□□ 0.31
PDGFB-202ENST00000381551 FAM189BP81408 668 aa16.99■□□□□ 0.31
PDGFB-202ENST00000381551 KCNA1Q09470 495 aa16.99■□□□□ 0.31
PDGFB-202ENST00000381551 KIAA0895Q8NCT3 520 aa16.99■□□□□ 0.31
PDGFB-202ENST00000381551 SCFD1Q8WVM8 642 aa16.99■□□□□ 0.31
PDGFB-202ENST00000381551 LINC01599Q8WXQ3 324 aa16.99■□□□□ 0.31
PDGFB-202ENST00000381551 HERVK_113Q902F9 699 aa16.99■□□□□ 0.31
PDGFB-202ENST00000381551 HVCN1Q96D96 273 aa16.99■□□□□ 0.31
PDGFB-202ENST00000381551 CPB2Q96IY4 423 aa16.99■□□□□ 0.31
PDGFB-202ENST00000381551 ACO2Q99798 780 aaKnown RBP16.99■□□□□ 0.31
PDGFB-202ENST00000381551 ADAM2Q99965 735 aa16.99■□□□□ 0.31
PDGFB-202ENST00000381551 TARS2Q9BW92 718 aaKnown RBP16.99■□□□□ 0.31
PDGFB-202ENST00000381551 TRAIPQ9BWF2 469 aa16.99■□□□□ 0.31
PDGFB-202ENST00000381551 MRPL4Q9BYD3 311 aaKnown RBP16.99■□□□□ 0.31
PDGFB-202ENST00000381551 PIN4Q9Y237 131 aaKnown RBP16.99■□□□□ 0.31
PDGFB-202ENST00000381551 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.98■□□□□ 0.31
PDGFB-202ENST00000381551 EFCAB14O75071 495 aa16.98■□□□□ 0.31
PDGFB-202ENST00000381551 BAIAP3O94812 1187 aa16.98■□□□□ 0.31
PDGFB-202ENST00000381551 NFKBIBQ15653 356 aa16.98■□□□□ 0.31
PDGFB-202ENST00000381551 C9orf50Q5SZB4 431 aa16.98■□□□□ 0.31
PDGFB-202ENST00000381551 UBXN11Q5T124 520 aa16.98■□□□□ 0.31
PDGFB-202ENST00000381551 L1TD1Q5T7N2 865 aaKnown RBP16.98■□□□□ 0.31
PDGFB-202ENST00000381551 RASIP1Q5U651 963 aa16.98■□□□□ 0.31
PDGFB-202ENST00000381551 NOTUMQ6P988 496 aa16.98■□□□□ 0.31
PDGFB-202ENST00000381551 ZPBP2Q6X784 338 aa16.98■□□□□ 0.31
PDGFB-202ENST00000381551 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.98■□□□□ 0.31
PDGFB-202ENST00000381551 STXBP4Q6ZWJ1 553 aa16.98■□□□□ 0.31
PDGFB-202ENST00000381551 SLC24A5Q71RS6 500 aa16.98■□□□□ 0.31
PDGFB-202ENST00000381551 MAP4K3Q8IVH8 894 aa16.98■□□□□ 0.31
PDGFB-202ENST00000381551 ACCSQ96QU6 501 aa16.98■□□□□ 0.31
PDGFB-202ENST00000381551 UBE2OQ9C0C9 1292 aaKnown RBP16.98■□□□□ 0.31
PDGFB-202ENST00000381551 PTPRHQ9HD43 1115 aa16.98■□□□□ 0.31
PDGFB-202ENST00000381551 MAN1B1Q9UKM7 699 aa16.98■□□□□ 0.31
PDGFB-202ENST00000381551 TNFSF13BQ9Y275 285 aa16.98■□□□□ 0.31
PDGFB-202ENST00000381551 C9IYK1 514 aa16.97■□□□□ 0.31
PDGFB-202ENST00000381551 EIF3DO15371 548 aaKnown RBP eCLIP16.97■□□□□ 0.31
PDGFB-202ENST00000381551 PIGRP01833 764 aa16.97■□□□□ 0.31
PDGFB-202ENST00000381551 SHHQ15465 462 aa16.97■□□□□ 0.31
PDGFB-202ENST00000381551 BMT2Q1RMZ1 405 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms