RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 PRKCBP05771 671 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 MYBP10242 640 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 HOXA11P31270 313 aaPredicted RBP13.94□□□□□ -0.18
SMN1-202ENST00000380707 SARSP49591 514 aaKnown RBP13.94□□□□□ -0.18
SMN1-202ENST00000380707 GTF2BQ00403 316 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 STK4Q13043 487 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 NFKBIBQ15653 356 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 MAPK6Q16659 721 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 FAM187BQ17R55 369 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 FAM26FQ5R3K3 315 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 SLC17A8Q8NDX2 589 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 SEPT8Q92599 483 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 SMARCE1Q969G3 411 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 NUP62CLQ9H1M0 184 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 ST6GALNAC4Q9H4F1 302 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 SLC39A2Q9NP94 309 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 PRMT7Q9NVM4 692 aaPredicted RBP13.94□□□□□ -0.18
SMN1-202ENST00000380707 TBX20Q9UMR3 447 aa13.94□□□□□ -0.18
SMN1-202ENST00000380707 H0YCG3 227 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 ACKR2O00590 384 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 MGEA5O60502 916 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 PPP1R37O75864 691 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 ERLIN2O94905 339 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 GCNT3O95395 438 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 KCNA1Q09470 495 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 PSMD2Q13200 908 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 KCNB1Q14721 858 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 PCBP1Q15365 356 aaKnown RBP eCLIP13.93□□□□□ -0.18
SMN1-202ENST00000380707 NT5DC1Q5TFE4 455 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 EPM2AIP1Q7L775 607 aaPredicted RBP13.93□□□□□ -0.18
SMN1-202ENST00000380707 KCNN1Q92952 543 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 CPB2Q96IY4 423 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 PRIMPOLQ96LW4 560 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 GSDMAQ96QA5 445 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 AGPAT5Q9NUQ2 364 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 KIAA1468Q9P260 1216 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 PHLPP2Q6ZVD8 1323 aa13.93□□□□□ -0.18
SMN1-202ENST00000380707 PFKMP08237 780 aa13.92□□□□□ -0.18
SMN1-202ENST00000380707 ARF4P18085 180 aaPredicted RBP13.92□□□□□ -0.18
SMN1-202ENST00000380707 PTMSP20962 102 aa13.92□□□□□ -0.18
SMN1-202ENST00000380707 SCP2P22307 547 aa13.92□□□□□ -0.18
SMN1-202ENST00000380707 STRN3Q13033 797 aa13.92□□□□□ -0.18
SMN1-202ENST00000380707 PRPF4BQ13523 1007 aaKnown RBP13.92□□□□□ -0.18
SMN1-202ENST00000380707 TMEM240Q5SV17 173 aa13.92□□□□□ -0.18
SMN1-202ENST00000380707 CNKSR3Q6P9H4 555 aa13.92□□□□□ -0.18
SMN1-202ENST00000380707 ZNF365Q70YC5 407 aa13.92□□□□□ -0.18
SMN1-202ENST00000380707 RTN4RL1Q86UN2 441 aaPredicted RBP13.92□□□□□ -0.18
SMN1-202ENST00000380707 KIAA0895Q8NCT3 520 aa13.92□□□□□ -0.18
SMN1-202ENST00000380707 LINC01599Q8WXQ3 324 aa13.92□□□□□ -0.18
SMN1-202ENST00000380707 APBB2Q92870 758 aa13.92□□□□□ -0.18
SMN1-202ENST00000380707 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.92□□□□□ -0.18
SMN1-202ENST00000380707 PIN4Q9Y237 131 aaKnown RBP13.92□□□□□ -0.18
SMN1-202ENST00000380707 PCDHB13Q9Y5F0 798 aa13.92□□□□□ -0.18
SMN1-202ENST00000380707 PRPF6O94906 941 aaKnown RBP13.91□□□□□ -0.18
SMN1-202ENST00000380707 FGBP02675 491 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 HOXD13P35453 343 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 IKBKEQ14164 716 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 DSC3Q14574 896 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 KLHL40Q2TBA0 621 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 ISM2Q6H9L7 571 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 OTOP2Q7RTS6 562 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 CDR2LQ86X02 465 aaPredicted RBP13.91□□□□□ -0.18
SMN1-202ENST00000380707 MAP4K3Q8IVH8 894 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 SCFD1Q8WVM8 642 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 CCDC47Q96A33 483 aaKnown RBP13.91□□□□□ -0.18
SMN1-202ENST00000380707 ADAM2Q99965 735 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 GDF15Q99988 308 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 TARS2Q9BW92 718 aaKnown RBP13.91□□□□□ -0.18
SMN1-202ENST00000380707 IKZF4Q9H2S9 585 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 CHST12Q9NRB3 414 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 RMND1Q9NWS8 449 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 TMEM63CQ9P1W3 806 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 MAN1B1Q9UKM7 699 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 GDAQ9Y2T3 454 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 CNTNAP2Q9UHC6 1331 aa13.91□□□□□ -0.18
SMN1-202ENST00000380707 A0A1B0GUA9 196 aa13.9□□□□□ -0.18
SMN1-202ENST00000380707 BIN1O00499 593 aa13.9□□□□□ -0.18
SMN1-202ENST00000380707 ENPP3O14638 875 aa13.9□□□□□ -0.18
SMN1-202ENST00000380707 BMP6P22004 513 aa13.9□□□□□ -0.18
SMN1-202ENST00000380707 ABCD1P33897 745 aa13.9□□□□□ -0.18
SMN1-202ENST00000380707 NCBP1Q09161 790 aaKnown RBP13.9□□□□□ -0.18
SMN1-202ENST00000380707 ALCAMQ13740 583 aa13.9□□□□□ -0.18
SMN1-202ENST00000380707 L1TD1Q5T7N2 865 aaKnown RBP13.9□□□□□ -0.18
SMN1-202ENST00000380707 PSRC1Q6PGN9 363 aaPredicted RBP13.9□□□□□ -0.18
SMN1-202ENST00000380707 CHRDL2Q6WN34 429 aa13.9□□□□□ -0.18
SMN1-202ENST00000380707 SMYD4Q8IYR2 804 aaPredicted RBP13.9□□□□□ -0.18
SMN1-202ENST00000380707 ZNF507Q8TCN5 953 aa13.9□□□□□ -0.18
SMN1-202ENST00000380707 ACO2Q99798 780 aaKnown RBP13.9□□□□□ -0.18
SMN1-202ENST00000380707 FTHL17Q9BXU8 183 aa13.9□□□□□ -0.18
SMN1-202ENST00000380707 MRPL4Q9BYD3 311 aaKnown RBP13.9□□□□□ -0.18
SMN1-202ENST00000380707 TSPYL2Q9H2G4 693 aaPredicted RBP13.9□□□□□ -0.18
SMN1-202ENST00000380707 CHD9Q3L8U1 2897 aa13.9□□□□□ -0.18
SMN1-202ENST00000380707 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.9□□□□□ -0.19
SMN1-202ENST00000380707 EIF3DO15371 548 aaKnown RBP eCLIP13.9□□□□□ -0.19
SMN1-202ENST00000380707 ZSCAN20P17040 1043 aaPredicted RBP13.9□□□□□ -0.19
SMN1-202ENST00000380707 AXLP30530 894 aa13.9□□□□□ -0.19
SMN1-202ENST00000380707 MORC3Q14149 939 aa13.9□□□□□ -0.19
SMN1-202ENST00000380707 CCDC183Q5T5S1 534 aa13.9□□□□□ -0.19
SMN1-202ENST00000380707 ATF7IP2Q5U623 682 aa13.9□□□□□ -0.19
SMN1-202ENST00000380707 TWF2Q6IBS0 349 aaKnown RBP13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms