RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 IGKV6-21A0A0C4DH24 114 aa14.8□□□□□ -0.04
CDC42-202ENST00000344548 CCP110O43303 1012 aa14.8□□□□□ -0.04
CDC42-202ENST00000344548 RFC5P40937 340 aa14.8□□□□□ -0.04
CDC42-202ENST00000344548 PPP2R5AQ15172 486 aa14.8□□□□□ -0.04
CDC42-202ENST00000344548 ZBTB41Q5SVQ8 909 aa14.8□□□□□ -0.04
CDC42-202ENST00000344548 LRRN4CLQ8ND94 238 aa14.8□□□□□ -0.04
CDC42-202ENST00000344548 MYRIPQ8NFW9 859 aa14.8□□□□□ -0.04
CDC42-202ENST00000344548 KIF18AQ8NI77 898 aa14.8□□□□□ -0.04
CDC42-202ENST00000344548 HVCN1Q96D96 273 aa14.8□□□□□ -0.04
CDC42-202ENST00000344548 IQCDQ96DY2 449 aa14.8□□□□□ -0.04
CDC42-202ENST00000344548 PRIMPOLQ96LW4 560 aa14.8□□□□□ -0.04
CDC42-202ENST00000344548 C16orf70Q9BSU1 422 aa14.8□□□□□ -0.04
CDC42-202ENST00000344548 SMARCAD1Q9H4L7 1026 aa14.8□□□□□ -0.04
CDC42-202ENST00000344548 EVPLQ92817 2033 aa14.79□□□□□ -0.04
CDC42-202ENST00000344548 SLC15A5A6NIM6 579 aa14.79□□□□□ -0.04
CDC42-202ENST00000344548 GH1P01241 217 aa14.79□□□□□ -0.04
CDC42-202ENST00000344548 SRGAP2CP0DJJ0 459 aa14.79□□□□□ -0.04
CDC42-202ENST00000344548 IGBP1P78318 339 aa14.79□□□□□ -0.04
CDC42-202ENST00000344548 GFPT1Q06210 699 aaPredicted RBP14.79□□□□□ -0.04
CDC42-202ENST00000344548 LAMC2Q13753 1193 aa14.79□□□□□ -0.04
CDC42-202ENST00000344548 BRDTQ58F21 947 aaPredicted RBP14.79□□□□□ -0.04
CDC42-202ENST00000344548 PHLDB3Q6NSJ2 640 aa14.79□□□□□ -0.04
CDC42-202ENST00000344548 IRF2BP2Q7Z5L9 587 aa14.79□□□□□ -0.04
CDC42-202ENST00000344548 SLC17A8Q8NDX2 589 aa14.79□□□□□ -0.04
CDC42-202ENST00000344548 DEPTORQ8TB45 409 aa14.79□□□□□ -0.04
CDC42-202ENST00000344548 CCDC42Q96M95 316 aa14.79□□□□□ -0.04
CDC42-202ENST00000344548 FBXL18Q96ME1 805 aa14.79□□□□□ -0.04
CDC42-202ENST00000344548 EXOC7Q9UPT5 735 aa14.79□□□□□ -0.04
CDC42-202ENST00000344548 TLL2Q9Y6L7 1015 aa14.79□□□□□ -0.04
CDC42-202ENST00000344548 GTPBP10A4D1E9 387 aaKnown RBP14.78□□□□□ -0.04
CDC42-202ENST00000344548 EIF3CLB5ME19 914 aaKnown RBP14.78□□□□□ -0.04
CDC42-202ENST00000344548 K7ERI5 159 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 KIF3CO14782 793 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 INSRRP14616 1297 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 CYP2C19P33261 490 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 CLCN3P51790 818 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 KIF11P52732 1056 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 CRHR2Q13324 411 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 NAA30Q147X3 362 aaPredicted RBP14.78□□□□□ -0.04
CDC42-202ENST00000344548 SEZ6Q53EL9 994 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 SFMBT2Q5VUG0 894 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 INTS8Q75QN2 995 aaKnown RBP14.78□□□□□ -0.04
CDC42-202ENST00000344548 DNAAF5Q86Y56 855 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 BICD1Q96G01 975 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 EIF3CQ99613 913 aaKnown RBP14.78□□□□□ -0.04
CDC42-202ENST00000344548 FAM213AQ9BRX8 229 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 GPR88Q9GZN0 384 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 TMEM117Q9H0C3 514 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 CGNQ9P2M7 1197 aaKnown RBP14.78□□□□□ -0.04
CDC42-202ENST00000344548 PAXBP1Q9Y5B6 917 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 HTTP42858 3142 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 LRRIQ3A6PVS8 624 aaPredicted RBP14.78□□□□□ -0.04
CDC42-202ENST00000344548 ADCY3O60266 1144 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 JAM2P57087 298 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 MYL7Q01449 175 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 LAMTOR4Q0VGL1 99 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 SCARA3Q6AZY7 606 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 CCDC170Q8IYT3 715 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 PPTC7Q8NI37 304 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 PARD3BQ8TEW8 1205 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 FAM167AQ96KS9 214 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 ABHD16BQ9H3Z7 469 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 AIPL1Q9NZN9 384 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 GUCA1BQ9UMX6 200 aa14.78□□□□□ -0.04
CDC42-202ENST00000344548 KRT13P13646 458 aa14.77□□□□□ -0.04
CDC42-202ENST00000344548 CYP2B6P20813 491 aa14.77□□□□□ -0.04
CDC42-202ENST00000344548 ACOT2P49753 483 aa14.77□□□□□ -0.04
CDC42-202ENST00000344548 NLRP11P59045 1033 aaKnown RBP14.77□□□□□ -0.04
CDC42-202ENST00000344548 SNRPFP62306 86 aaKnown RBP14.77□□□□□ -0.04
CDC42-202ENST00000344548 MAP2K5Q13163 448 aa14.77□□□□□ -0.04
CDC42-202ENST00000344548 DUSP28Q4G0W2 176 aa14.77□□□□□ -0.04
CDC42-202ENST00000344548 CRELD2Q6UXH1 353 aaPredicted RBP14.77□□□□□ -0.04
CDC42-202ENST00000344548 RHPN2Q8IUC4 686 aa14.77□□□□□ -0.04
CDC42-202ENST00000344548 RNF149Q8NC42 400 aa14.77□□□□□ -0.04
CDC42-202ENST00000344548 SEMA4DQ92854 862 aa14.77□□□□□ -0.04
CDC42-202ENST00000344548 INTS2Q9H0H0 1204 aaKnown RBP14.77□□□□□ -0.04
CDC42-202ENST00000344548 ERAP1Q9NZ08 941 aa14.77□□□□□ -0.04
CDC42-202ENST00000344548 ABT1Q9ULW3 272 aaKnown RBP14.77□□□□□ -0.04
CDC42-202ENST00000344548 GOLGA6L9A6NEM1 432 aa14.77□□□□□ -0.05
CDC42-202ENST00000344548 KIF2AO00139 706 aaPredicted RBP14.77□□□□□ -0.05
CDC42-202ENST00000344548 CSDE1O75534 798 aaKnown RBP14.77□□□□□ -0.05
CDC42-202ENST00000344548 TFRCP02786 760 aaKnown RBP14.77□□□□□ -0.05
CDC42-202ENST00000344548 CYLC1P35663 651 aaPredicted RBP14.77□□□□□ -0.05
CDC42-202ENST00000344548 LIG4P49917 911 aa14.77□□□□□ -0.05
CDC42-202ENST00000344548 CAP1Q01518 475 aa14.77□□□□□ -0.05
CDC42-202ENST00000344548 TDRD12Q587J7 1177 aaKnown RBP14.77□□□□□ -0.05
CDC42-202ENST00000344548 ZNF569Q5MCW4 686 aa14.77□□□□□ -0.05
CDC42-202ENST00000344548 LMBRD2Q68DH5 695 aaPredicted RBP14.77□□□□□ -0.05
CDC42-202ENST00000344548 EFCAB12Q6NXP0 572 aa14.77□□□□□ -0.05
CDC42-202ENST00000344548 ARHGEF19Q8IW93 802 aa14.77□□□□□ -0.05
CDC42-202ENST00000344548 METTL13Q8N6R0 699 aa14.77□□□□□ -0.05
CDC42-202ENST00000344548 USP6NLQ92738 828 aa14.77□□□□□ -0.05
CDC42-202ENST00000344548 SYN2Q92777 582 aaPredicted RBP14.77□□□□□ -0.05
CDC42-202ENST00000344548 KAT5Q92993 513 aa14.77□□□□□ -0.05
CDC42-202ENST00000344548 MFSD14AQ96MC6 490 aa14.77□□□□□ -0.05
CDC42-202ENST00000344548 PPP1R16BQ96T49 567 aa14.77□□□□□ -0.05
CDC42-202ENST00000344548 HAUS4Q9H6D7 363 aa14.77□□□□□ -0.05
CDC42-202ENST00000344548 GJD2Q9UKL4 321 aa14.77□□□□□ -0.05
CDC42-202ENST00000344548 PHLPP2Q6ZVD8 1323 aa14.77□□□□□ -0.05
CDC42-202ENST00000344548 ZSWIM8A7E2V4 1837 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms