RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 MYZAPP0CAP1 466 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 LSP1P33241 339 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 QARSP47897 775 aaKnown RBP15.74■□□□□ 0.11
TDP2-201ENST00000341060 GTF2BQ00403 316 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 TCEAL1Q15170 157 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 C11orf63Q6NUN7 778 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 ILDR2Q71H61 639 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 TMC3Q7Z5M5 1100 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 ARHGEF19Q8IW93 802 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 XXYLT1Q8NBI6 393 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 SLC20A1Q8WUM9 679 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 CLEC4DQ8WXI8 215 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 HSPBP1Q9NZL4 362 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 PIM2Q9P1W9 311 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 UBIAD1Q9Y5Z9 338 aa15.74■□□□□ 0.11
TDP2-201ENST00000341060 GOLGA6L10A0A0M3HER8 536 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 NDUFAB1O14561 156 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 PMM2O15305 246 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 INPP5BP32019 993 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 FLT3P36888 993 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 SNRPFP62306 86 aaKnown RBP15.73■□□□□ 0.11
TDP2-201ENST00000341060 GUCY1A3Q02108 690 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 MAP3K10Q02779 954 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 ZNF844Q08AG5 666 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 C1orf220Q5T0J3 134 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 MCF2L2Q86YR7 1114 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 PRPF38AQ8NAV1 312 aaKnown RBP15.73■□□□□ 0.11
TDP2-201ENST00000341060 MTMR14Q8NCE2 650 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 PSMD1Q99460 953 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 RAB17Q9H0T7 212 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 RABEP2Q9H5N1 569 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 TMEM51Q9NW97 253 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 PGAP2Q9UHJ9 254 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
TDP2-201ENST00000341060 NR2E1Q9Y466 385 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 SAMM50Q9Y512 469 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 SYNGAP1Q96PV0 1343 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 ANKRD65E5RJM6 399 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 MRPS9P82933 396 aaKnown RBP15.73■□□□□ 0.11
TDP2-201ENST00000341060 BIRC3Q13489 604 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 PRPF4BQ13523 1007 aaKnown RBP15.73■□□□□ 0.11
TDP2-201ENST00000341060 MTMR1Q13613 665 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 HAUS6Q7Z4H7 955 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 ALG3Q92685 438 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 TIPINQ9BVW5 301 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 EPN3Q9H201 632 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 USP20Q9Y2K6 914 aa15.73■□□□□ 0.11
TDP2-201ENST00000341060 MIF4GDA9UHW6 222 aaKnown RBP15.72■□□□□ 0.11
TDP2-201ENST00000341060 VCAM1P19320 739 aa15.72■□□□□ 0.11
TDP2-201ENST00000341060 YWHABP31946 246 aaKnown RBP15.72■□□□□ 0.11
TDP2-201ENST00000341060 MDH1P40925 334 aaKnown RBP15.72■□□□□ 0.11
TDP2-201ENST00000341060 GCLMP48507 274 aa15.72■□□□□ 0.11
TDP2-201ENST00000341060 MCCD1P59942 119 aaPredicted RBP15.72■□□□□ 0.11
TDP2-201ENST00000341060 SPP2Q13103 211 aa15.72■□□□□ 0.11
TDP2-201ENST00000341060 RUFY4Q6ZNE9 571 aa15.72■□□□□ 0.11
TDP2-201ENST00000341060 RTKN2Q8IZC4 609 aa15.72■□□□□ 0.11
TDP2-201ENST00000341060 ARFGAP2Q8N6H7 521 aa15.72■□□□□ 0.11
TDP2-201ENST00000341060 OR2W6PQ8NHA6 318 aa15.72■□□□□ 0.11
TDP2-201ENST00000341060 UBLCP1Q8WVY7 318 aaPredicted RBP15.72■□□□□ 0.11
TDP2-201ENST00000341060 PPM1EQ8WY54 764 aa15.72■□□□□ 0.11
TDP2-201ENST00000341060 ZNF341Q9BYN7 854 aa15.72■□□□□ 0.11
TDP2-201ENST00000341060 TBC1D22BQ9NU19 505 aa15.72■□□□□ 0.11
TDP2-201ENST00000341060 FAM169AQ9Y6X4 670 aa15.72■□□□□ 0.11
TDP2-201ENST00000341060 ASTN2O75129 1339 aaPredicted RBP15.72■□□□□ 0.11
TDP2-201ENST00000341060 ATXN2Q99700 1313 aaKnown RBP15.72■□□□□ 0.11
TDP2-201ENST00000341060 SRRM3A6NNA2 597 aaPredicted RBP15.71■□□□□ 0.11
TDP2-201ENST00000341060 WDR46O15213 610 aaKnown RBP15.71■□□□□ 0.11
TDP2-201ENST00000341060 FTLP02792 175 aaPredicted RBP15.71■□□□□ 0.11
TDP2-201ENST00000341060 MXI1P50539 228 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 DR1Q01658 176 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 SPDYCQ5MJ68 293 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 NAA35Q5VZE5 725 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 LARGE2Q8N3Y3 721 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 PLEKHO2Q8TD55 490 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 ATP8B4Q8TF62 1192 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 TRIM51Q9BSJ1 452 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 DPH5Q9H2P9 285 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 ERVK-5Q9HDB9 667 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 ZNF277Q9NRM2 450 aaPredicted RBP15.71■□□□□ 0.11
TDP2-201ENST00000341060 MAP3K20Q9NYL2 800 aaKnown RBP15.71■□□□□ 0.11
TDP2-201ENST00000341060 BCS1LQ9Y276 419 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 ALG6Q9Y672 507 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 COL11A1P12107 1806 aaPredicted RBP15.71■□□□□ 0.11
TDP2-201ENST00000341060 MYO1FO00160 1098 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 NCKAP1LP55160 1127 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 DHX34Q14147 1143 aaKnown RBP15.71■□□□□ 0.11
TDP2-201ENST00000341060 PTGISQ16647 500 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 DALRD3Q5D0E6 543 aaKnown RBP15.71■□□□□ 0.11
TDP2-201ENST00000341060 C4orf19Q8IY42 314 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 RPUSD2Q8IZ73 545 aaKnown RBP15.71■□□□□ 0.11
TDP2-201ENST00000341060 SLC17A8Q8NDX2 589 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 ZSWIM2Q8NEG5 633 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 EPS8L1Q8TE68 723 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 LPAR1Q92633 364 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 IWS1Q96ST2 819 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 FMO2Q99518 471 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 TMEM117Q9H0C3 514 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 CTTNBP2NLQ9P2B4 639 aa15.71■□□□□ 0.11
TDP2-201ENST00000341060 DOCK5Q9H7D0 1870 aa15.7■□□□□ 0.1
TDP2-201ENST00000341060 A0A087WUV0 522 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms