RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 KIFC3Q9BVG8 833 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 TXLNGYQ9BZA5 131 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 CDC42EP4Q9H3Q1 356 aaKnown RBP10.36□□□□□ -0.75
RPGR-201ENST00000318842 C15orf41Q9Y2V0 281 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 SPDYE5A6NIY4 337 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 NQO1P15559 274 aaKnown RBP10.36□□□□□ -0.75
RPGR-201ENST00000318842 JAM2P57087 298 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 BIRC2Q13490 618 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 AGBL2Q5U5Z8 902 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 LRCH2Q5VUJ6 765 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 LMBRD2Q68DH5 695 aaPredicted RBP10.36□□□□□ -0.75
RPGR-201ENST00000318842 VSTM1Q6UX27 236 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 SLC47A2Q86VL8 602 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 RPUSD2Q8IZ73 545 aaKnown RBP10.36□□□□□ -0.75
RPGR-201ENST00000318842 C4orf33Q8N1A6 199 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 PROM2Q8N271 834 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 UTP4Q969X6 686 aaKnown RBP10.36□□□□□ -0.75
RPGR-201ENST00000318842 CCDC127Q96BQ5 260 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 HAUS1Q96CS2 278 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 SUCLA2Q9P2R7 463 aaPredicted RBP10.36□□□□□ -0.75
RPGR-201ENST00000318842 ASIC3Q9UHC3 531 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 ZNF652Q9Y2D9 606 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.36□□□□□ -0.75
RPGR-201ENST00000318842 LAMA3Q16787 3333 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 C21orf2O43822 256 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 SNX3O60493 162 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 CYP3A4P08684 503 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 FOXN2P32314 431 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 SOX5P35711 763 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 PTGIRP43119 386 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 SOX10P56693 466 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 ZNF543Q08ER8 600 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 OVGP1Q12889 678 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 GALNT17Q6IS24 598 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 SPATS2Q86XZ4 545 aaKnown RBP10.36□□□□□ -0.75
RPGR-201ENST00000318842 ANKS4BQ8N8V4 417 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 GLIS1Q8NBF1 620 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 CEP63Q96MT8 703 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 PI4K2AQ9BTU6 479 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 ETNK1Q9HBU6 452 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 CD209Q9NNX6 404 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 AAASQ9NRG9 546 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 ADAM22Q9P0K1 906 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 ZMYM2Q9UBW7 1377 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 GOLGA8SH3BPF8 625 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 GOLGA8MH3BSY2 632 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 CYP26A1O43174 497 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 SPOPO43791 374 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 TBCAO75347 108 aaKnown RBP10.35□□□□□ -0.75
RPGR-201ENST00000318842 ENTPD5O75356 428 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 ZSCAN5DPP0CG00 497 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 ETS1P14921 441 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 JAG1P78504 1218 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 ARHGAP4P98171 946 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 EMC10Q5UCC4 262 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 SCARA3Q6AZY7 606 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 ZNF804AQ7Z570 1209 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 PIGWQ7Z7B1 504 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 RASGEF1CQ8N431 466 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 PRR11Q96HE9 360 aaPredicted RBP10.35□□□□□ -0.75
RPGR-201ENST00000318842 DYDC2Q96IM9 177 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 INTS2Q9H0H0 1204 aaKnown RBP10.35□□□□□ -0.75
RPGR-201ENST00000318842 DAGLAQ9Y4D2 1042 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 GOLGA8RI6L899 631 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 TP73O15350 636 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 SSR1P43307 286 aaKnown RBP10.35□□□□□ -0.75
RPGR-201ENST00000318842 PPATQ06203 517 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 SPIRE1Q08AE8 756 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 DRP2Q13474 957 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 PDIA5Q14554 519 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 SLFN11Q7Z7L1 901 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 ZNF526Q8TF50 670 aaPredicted RBP10.35□□□□□ -0.75
RPGR-201ENST00000318842 SYN2Q92777 582 aaPredicted RBP10.35□□□□□ -0.75
RPGR-201ENST00000318842 TGS1Q96RS0 853 aaKnown RBP10.35□□□□□ -0.75
RPGR-201ENST00000318842 CBWD1Q9BRT8 395 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 POLLQ9UGP5 575 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 DNM3Q9UQ16 869 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 DLEC1Q9Y238 1755 aa10.35□□□□□ -0.75
RPGR-201ENST00000318842 DDX60LQ5H9U9 1706 aaKnown RBP10.34□□□□□ -0.75
RPGR-201ENST00000318842 PNMA6FA0A0J9YX94 578 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 A0A1B0GVG6 124 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 MSH4O15457 936 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 DNAJC8O75937 253 aaPredicted RBP10.34□□□□□ -0.75
RPGR-201ENST00000318842 FMO5P49326 533 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 PPP3CAQ08209 521 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 MTMR3Q13615 1198 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 FASTKD3Q14CZ7 662 aaKnown RBP10.34□□□□□ -0.75
RPGR-201ENST00000318842 TMED2Q15363 201 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 SMAD1Q15797 465 aaKnown RBP10.34□□□□□ -0.75
RPGR-201ENST00000318842 LACTB2Q53H82 288 aaPredicted RBP10.34□□□□□ -0.75
RPGR-201ENST00000318842 ANKS1BQ7Z6G8 1248 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 LONP2Q86WA8 852 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 ECHDC2Q86YB7 292 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 RFFLQ8WZ73 363 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 SLC5A5Q92911 643 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 L3MBTL3Q96JM7 780 aaPredicted RBP10.34□□□□□ -0.75
RPGR-201ENST00000318842 KDM4CQ9H3R0 1056 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 ATP6V0A4Q9HBG4 840 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 GPRC5CQ9NQ84 441 aa10.34□□□□□ -0.75
RPGR-201ENST00000318842 A1CFQ9NQ94 594 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms