RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 PCDH18Q9HCL0 1135 aa17.36■□□□□ 0.37
SOX30-202ENST00000311371 USP40Q9NVE5 1235 aa17.36■□□□□ 0.37
SOX30-202ENST00000311371 SUCLA2Q9P2R7 463 aaPredicted RBP17.36■□□□□ 0.37
SOX30-202ENST00000311371 ADARP55265 1226 aaKnown RBP17.36■□□□□ 0.37
SOX30-202ENST00000311371 BTG3Q14201 252 aaPredicted RBP17.36■□□□□ 0.37
SOX30-202ENST00000311371 IZUMO2Q6UXV1 221 aa17.36■□□□□ 0.37
SOX30-202ENST00000311371 SCUBE1Q8IWY4 988 aa17.36■□□□□ 0.37
SOX30-202ENST00000311371 ST13P4Q8IZP2 240 aaPredicted RBP17.36■□□□□ 0.37
SOX30-202ENST00000311371 C17orf50Q8WW18 174 aa17.36■□□□□ 0.37
SOX30-202ENST00000311371 OLFM3Q96PB7 478 aa17.36■□□□□ 0.37
SOX30-202ENST00000311371 SLCO1B3Q9NPD5 702 aa17.36■□□□□ 0.37
SOX30-202ENST00000311371 RASAL2Q9UJF2 1139 aa17.36■□□□□ 0.37
SOX30-202ENST00000311371 PKD1L3Q7Z443 1732 aa17.36■□□□□ 0.37
SOX30-202ENST00000311371 DDX3XO00571 662 aaKnown RBP eCLIP17.35■□□□□ 0.37
SOX30-202ENST00000311371 RAD21O60216 631 aa17.35■□□□□ 0.37
SOX30-202ENST00000311371 DCTN3O75935 186 aa17.35■□□□□ 0.37
SOX30-202ENST00000311371 ALOX15P16050 662 aaPredicted RBP17.35■□□□□ 0.37
SOX30-202ENST00000311371 TRAPPC10P48553 1259 aa17.35■□□□□ 0.37
SOX30-202ENST00000311371 PPP2R5CQ13362 524 aa17.35■□□□□ 0.37
SOX30-202ENST00000311371 UBE3CQ15386 1083 aa17.35■□□□□ 0.37
SOX30-202ENST00000311371 ALKBH5Q6P6C2 394 aaKnown RBP17.35■□□□□ 0.37
SOX30-202ENST00000311371 SRRM1Q8IYB3 904 aaKnown RBP17.35■□□□□ 0.37
SOX30-202ENST00000311371 SMYD1Q8NB12 490 aa17.35■□□□□ 0.37
SOX30-202ENST00000311371 C8orf37Q96NL8 207 aa17.35■□□□□ 0.37
SOX30-202ENST00000311371 PHTF1Q9UMS5 762 aa17.35■□□□□ 0.37
SOX30-202ENST00000311371 STXBP5LQ9Y2K9 1186 aa17.35■□□□□ 0.37
SOX30-202ENST00000311371 FGFR1OPO95684 399 aaKnown RBP17.35■□□□□ 0.37
SOX30-202ENST00000311371 MAPK7Q13164 816 aa17.35■□□□□ 0.37
SOX30-202ENST00000311371 SLC44A4Q53GD3 710 aa17.35■□□□□ 0.37
SOX30-202ENST00000311371 ZNF496Q96IT1 587 aaPredicted RBP17.35■□□□□ 0.37
SOX30-202ENST00000311371 CDK5RAP3Q96JB5 506 aa17.35■□□□□ 0.37
SOX30-202ENST00000311371 CATSPER2Q96P56 530 aa17.35■□□□□ 0.37
SOX30-202ENST00000311371 AMFRQ9UKV5 643 aa17.35■□□□□ 0.37
SOX30-202ENST00000311371 POTEJP0CG39 1038 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 CCDC92Q53HC0 331 aaPredicted RBP17.34■□□□□ 0.37
SOX30-202ENST00000311371 ARHGEF18Q6ZSZ5 1173 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 DYMQ7RTS9 669 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 LRP10Q7Z4F1 713 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 CABP7Q86V35 215 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 SATL1Q86VE3 508 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 DDX18Q9NVP1 670 aaKnown RBP17.34■□□□□ 0.37
SOX30-202ENST00000311371 ZFP69BQ9UJL9 534 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 FAM187AA6NFU0 413 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 BTNL10A8MVZ5 291 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 STRN3Q13033 797 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 R3HDM1Q15032 1099 aaKnown RBP17.34■□□□□ 0.37
SOX30-202ENST00000311371 DCAF12L1Q5VU92 463 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 AADACL2Q6P093 401 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 SCYL3Q8IZE3 742 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 NME8Q8N427 588 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 SIKE1Q9BRV8 207 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 RANBP17Q9H2T7 1088 aaKnown RBP17.34■□□□□ 0.37
SOX30-202ENST00000311371 DNAJC17Q9NVM6 304 aaKnown RBP17.34■□□□□ 0.37
SOX30-202ENST00000311371 NAGPAQ9UK23 515 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 TDRKHQ9Y2W6 561 aaKnown RBP17.34■□□□□ 0.37
SOX30-202ENST00000311371 LAMB4A4D0S4 1761 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 TRIM43BA6NCK2 446 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 BOLA2-SMG1P6H3BVE0 249 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 EXOC3O60645 756 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 RNASEH1O60930 286 aaKnown RBP17.34■□□□□ 0.37
SOX30-202ENST00000311371 SH3BGRP55822 239 aaPredicted RBP17.34■□□□□ 0.37
SOX30-202ENST00000311371 SH3RF3Q8TEJ3 882 aaPredicted RBP17.34■□□□□ 0.37
SOX30-202ENST00000311371 HES6Q96HZ4 224 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 SYNCQ9H7C4 482 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 METTL14Q9HCE5 456 aaKnown RBP17.34■□□□□ 0.37
SOX30-202ENST00000311371 RPL26L1Q9UNX3 145 aaKnown RBP17.34■□□□□ 0.37
SOX30-202ENST00000311371 PTPN22Q9Y2R2 807 aa17.34■□□□□ 0.37
SOX30-202ENST00000311371 SHANK3Q9BYB0 1731 aa17.33■□□□□ 0.37
SOX30-202ENST00000311371 GSG1L2A8MUP6 293 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 MINDY4BA8MYZ0 360 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 NBPF26B4DH59 902 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 SMIM22K7EJ46 135 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 RARGP13631 454 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 VARSP26640 1264 aaKnown RBP17.33■□□□□ 0.36
SOX30-202ENST00000311371 POLD1P28340 1107 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 MLH1P40692 756 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 PPP1R2P41236 205 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 THOC5Q13769 683 aaKnown RBP17.33■□□□□ 0.36
SOX30-202ENST00000311371 ALX1Q15699 326 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 LRRC55Q6ZSA7 311 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 PALB2Q86YC2 1186 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 GLIS3Q8NEA6 775 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 MCUR1Q96AQ8 359 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 OXCT2Q9BYC2 517 aaPredicted RBP17.33■□□□□ 0.36
SOX30-202ENST00000311371 ROPN1BQ9BZX4 212 aaPredicted RBP17.33■□□□□ 0.36
SOX30-202ENST00000311371 ROPN1Q9HAT0 212 aaPredicted RBP17.33■□□□□ 0.36
SOX30-202ENST00000311371 INIPQ9NRY2 104 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 STX18Q9P2W9 335 aaKnown RBP17.33■□□□□ 0.36
SOX30-202ENST00000311371 PYGMP11217 842 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 ATP5DP30049 168 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 TXNRD1Q16881 649 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 KLC3Q6P597 504 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 OLFML1Q6UWY5 402 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 CATIPQ7Z7H3 387 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 SLF2Q8IX21 1173 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 MAGEB6Q8N7X4 407 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 C7orf25Q9BPX7 421 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 UNC45AQ9H3U1 944 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 OSGEPQ9NPF4 335 aa17.33■□□□□ 0.36
SOX30-202ENST00000311371 STK32BQ9NY57 414 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms