RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 C9orf50Q5SZB4 431 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 RTN4RL1Q86UN2 441 aaPredicted RBP14.18□□□□□ -0.14
APTX-201ENST00000309615 LINC01599Q8WXQ3 324 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 CPB2Q96IY4 423 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 UBE2OQ9C0C9 1292 aaKnown RBP14.18□□□□□ -0.14
APTX-201ENST00000309615 EXOC1Q9NV70 894 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 PRMT7Q9NVM4 692 aaPredicted RBP14.18□□□□□ -0.14
APTX-201ENST00000309615 RANBP2P49792 3224 aaKnown RBP14.18□□□□□ -0.14
APTX-201ENST00000309615 H0YCG3 227 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 ACKR2O00590 384 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 GCNT3O95395 438 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 ARF4P18085 180 aaPredicted RBP14.18□□□□□ -0.14
APTX-201ENST00000309615 GTF2BQ00403 316 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 IKBKEQ14164 716 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 DSC3Q14574 896 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 PPP4R3CPQ6ZMV5 832 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 SLC17A8Q8NDX2 589 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 PRIMPOLQ96LW4 560 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 ADAM2Q99965 735 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 STRA6Q9BX79 667 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 CLSTN2Q9H4D0 955 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 ST6GALNAC4Q9H4F1 302 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 CXXC1Q9P0U4 656 aaPredicted RBP14.18□□□□□ -0.14
APTX-201ENST00000309615 TBX20Q9UMR3 447 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 PCDHA5Q9Y5H7 936 aa14.18□□□□□ -0.14
APTX-201ENST00000309615 CNTNAP2Q9UHC6 1331 aa14.17□□□□□ -0.14
APTX-201ENST00000309615 ABHD14A-ACY1A0A1B0GW23 586 aa14.17□□□□□ -0.14
APTX-201ENST00000309615 PPP1R37O75864 691 aa14.17□□□□□ -0.14
APTX-201ENST00000309615 ACTN1P12814 892 aa14.17□□□□□ -0.14
APTX-201ENST00000309615 KCNA1Q09470 495 aa14.17□□□□□ -0.14
APTX-201ENST00000309615 STK4Q13043 487 aa14.17□□□□□ -0.14
APTX-201ENST00000309615 PRPF4BQ13523 1007 aaKnown RBP14.17□□□□□ -0.14
APTX-201ENST00000309615 SHHQ15465 462 aa14.17□□□□□ -0.14
APTX-201ENST00000309615 NT5DC1Q5TFE4 455 aa14.17□□□□□ -0.14
APTX-201ENST00000309615 CDR2LQ86X02 465 aaPredicted RBP14.17□□□□□ -0.14
APTX-201ENST00000309615 SPATA20Q8TB22 786 aa14.17□□□□□ -0.14
APTX-201ENST00000309615 KCNN1Q92952 543 aa14.17□□□□□ -0.14
APTX-201ENST00000309615 FTHL17Q9BXU8 183 aa14.17□□□□□ -0.14
APTX-201ENST00000309615 SLC39A2Q9NP94 309 aa14.17□□□□□ -0.14
APTX-201ENST00000309615 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.16□□□□□ -0.14
APTX-201ENST00000309615 ENPP3O14638 875 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 RHOBTB3O94955 611 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 MBD3O95983 291 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 ZSCAN20P17040 1043 aaPredicted RBP14.16□□□□□ -0.14
APTX-201ENST00000309615 STRN3Q13033 797 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 TWF2Q6IBS0 349 aaKnown RBP14.16□□□□□ -0.14
APTX-201ENST00000309615 CHRDL2Q6WN34 429 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.16□□□□□ -0.14
APTX-201ENST00000309615 HERVK_113Q902F9 699 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 SMARCE1Q969G3 411 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 TSPYL2Q9H2G4 693 aaPredicted RBP14.16□□□□□ -0.14
APTX-201ENST00000309615 CHST12Q9NRB3 414 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 A0A1B0GUA9 196 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 ZBBXA8MT70 800 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 BAIAP3O94812 1187 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 PRPF6O94906 941 aaKnown RBP14.16□□□□□ -0.14
APTX-201ENST00000309615 SMC2O95347 1197 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 SCP2P22307 547 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 SARSP49591 514 aaKnown RBP14.16□□□□□ -0.14
APTX-201ENST00000309615 WDR5P61964 334 aaKnown RBP14.16□□□□□ -0.14
APTX-201ENST00000309615 NCBP1Q09161 790 aaKnown RBP14.16□□□□□ -0.14
APTX-201ENST00000309615 KCNB1Q14721 858 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 TMEM132AQ24JP5 1023 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 NOTUMQ6P988 496 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 KIAA0895Q8NCT3 520 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 TARS2Q9BW92 718 aaKnown RBP14.16□□□□□ -0.14
APTX-201ENST00000309615 MRPL4Q9BYD3 311 aaKnown RBP14.16□□□□□ -0.14
APTX-201ENST00000309615 NUP62CLQ9H1M0 184 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 IKZF4Q9H2S9 585 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 RGS18Q9NS28 235 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 PCDHB13Q9Y5F0 798 aa14.16□□□□□ -0.14
APTX-201ENST00000309615 IBSPP21815 317 aaPredicted RBP14.15□□□□□ -0.14
APTX-201ENST00000309615 AXLP30530 894 aa14.15□□□□□ -0.14
APTX-201ENST00000309615 BMP8BP34820 402 aa14.15□□□□□ -0.14
APTX-201ENST00000309615 DEFB103AP81534 67 aa14.15□□□□□ -0.14
APTX-201ENST00000309615 PSMD2Q13200 908 aa14.15□□□□□ -0.14
APTX-201ENST00000309615 ATF7IP2Q5U623 682 aa14.15□□□□□ -0.14
APTX-201ENST00000309615 EPM2AIP1Q7L775 607 aaPredicted RBP14.15□□□□□ -0.14
APTX-201ENST00000309615 MAP4K3Q8IVH8 894 aa14.15□□□□□ -0.14
APTX-201ENST00000309615 CCDC47Q96A33 483 aaKnown RBP14.15□□□□□ -0.14
APTX-201ENST00000309615 GSDMAQ96QA5 445 aa14.15□□□□□ -0.14
APTX-201ENST00000309615 ACO2Q99798 780 aaKnown RBP14.15□□□□□ -0.14
APTX-201ENST00000309615 PRO3102Q9H379 93 aa14.15□□□□□ -0.14
APTX-201ENST00000309615 PDZD7Q9H5P4 517 aa14.15□□□□□ -0.14
APTX-201ENST00000309615 EFCAB14O75071 495 aa14.14□□□□□ -0.15
APTX-201ENST00000309615 ABCD1P33897 745 aa14.14□□□□□ -0.15
APTX-201ENST00000309615 HOXD13P35453 343 aa14.14□□□□□ -0.15
APTX-201ENST00000309615 ALCAMQ13740 583 aa14.14□□□□□ -0.15
APTX-201ENST00000309615 UBXN11Q5T124 520 aa14.14□□□□□ -0.15
APTX-201ENST00000309615 L1TD1Q5T7N2 865 aaKnown RBP14.14□□□□□ -0.15
APTX-201ENST00000309615 RASIP1Q5U651 963 aa14.14□□□□□ -0.15
APTX-201ENST00000309615 EEF1DP3Q658K8 133 aa14.14□□□□□ -0.15
APTX-201ENST00000309615 ISM2Q6H9L7 571 aa14.14□□□□□ -0.15
APTX-201ENST00000309615 TMCO2Q7Z6W1 182 aaPredicted RBP14.14□□□□□ -0.15
APTX-201ENST00000309615 SCFD1Q8WVM8 642 aa14.14□□□□□ -0.15
APTX-201ENST00000309615 HVCN1Q96D96 273 aa14.14□□□□□ -0.15
APTX-201ENST00000309615 BICD1Q96G01 975 aa14.14□□□□□ -0.15
APTX-201ENST00000309615 RNPC3Q96LT9 517 aaKnown RBP14.14□□□□□ -0.15
APTX-201ENST00000309615 EIF2AQ9BY44 585 aaKnown RBP14.14□□□□□ -0.15
APTX-201ENST00000309615 MAN1B1Q9UKM7 699 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms