RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 PTGER2P43116 358 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 HSD17B4P51659 736 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 PEX3P56589 373 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 TKFCQ3LXA3 575 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 CPNE8Q86YQ8 564 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 CD302Q8IX05 232 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 RPUSD2Q8IZ73 545 aaKnown RBP13.94□□□□□ -0.18
HIF3A-204ENST00000300862 SUPT20HQ8NEM7 779 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 KRT35Q92764 455 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 MYCBPQ99417 103 aaPredicted RBP13.94□□□□□ -0.18
HIF3A-204ENST00000300862 CTTNBP2NLQ9P2B4 639 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 NFS1Q9Y697 457 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 LOC102724159A0A0B4J2E5 919 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 SGPL1O95470 568 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 ICAM1P05362 532 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 MYCLP12524 364 aaPredicted RBP13.94□□□□□ -0.18
HIF3A-204ENST00000300862 LSP1P33241 339 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 ZNF844Q08AG5 666 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 KIF22Q14807 665 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 PWP2Q15269 919 aaKnown RBP13.94□□□□□ -0.18
HIF3A-204ENST00000300862 LLGL1Q15334 1064 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 KDM7AQ6ZMT4 941 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 SLC9A9Q8IVB4 645 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 CCDC26Q8TAB7 109 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 CCDC127Q96BQ5 260 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 FAM84AQ96KN4 292 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 CEP89Q96ST8 783 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 TMBIM4Q9HC24 238 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 HSPBP1Q9NZL4 362 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 ALG6Q9Y672 507 aa13.94□□□□□ -0.18
HIF3A-204ENST00000300862 ANKRD62A6NC57 917 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 BACH1O14867 736 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 ATP9AO75110 1047 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 BCRP11274 1271 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 MUTP22033 750 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 DHX9Q08211 1270 aaKnown RBP13.93□□□□□ -0.18
HIF3A-204ENST00000300862 MTMR1Q13613 665 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 HAUS6Q7Z4H7 955 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 SAAL1Q96ER3 474 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 TAAR1Q96RJ0 339 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 POP1Q99575 1024 aaKnown RBP13.93□□□□□ -0.18
HIF3A-204ENST00000300862 SLITRK6Q9H5Y7 841 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 AGO4Q9HCK5 861 aaKnown RBP13.93□□□□□ -0.18
HIF3A-204ENST00000300862 UTP11Q9Y3A2 253 aaKnown RBP13.93□□□□□ -0.18
HIF3A-204ENST00000300862 COL2A1P02458 1487 aaPredicted RBP13.93□□□□□ -0.18
HIF3A-204ENST00000300862 GOLGA6L10A6NI86 522 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 MYO1FO00160 1098 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 CCDC172P0C7W6 258 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 MYZAPP0CAP1 466 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 PLS3P13797 630 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 HMGB2P26583 209 aaKnown RBP13.93□□□□□ -0.18
HIF3A-204ENST00000300862 YWHABP31946 246 aaKnown RBP13.93□□□□□ -0.18
HIF3A-204ENST00000300862 QARSP47897 775 aaKnown RBP13.93□□□□□ -0.18
HIF3A-204ENST00000300862 SOX10P56693 466 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 POU5F1Q01860 360 aaKnown RBP13.93□□□□□ -0.18
HIF3A-204ENST00000300862 MAP2K1Q02750 393 aaPredicted RBP13.93□□□□□ -0.18
HIF3A-204ENST00000300862 INTS8Q75QN2 995 aaKnown RBP13.93□□□□□ -0.18
HIF3A-204ENST00000300862 CBWD2Q8IUF1 395 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 BTBD6Q96KE9 485 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 ACCSQ96QU6 501 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 PCDHB18PQ96TA0 734 aa13.93□□□□□ -0.18
HIF3A-204ENST00000300862 DCDC2CA8MYV0 355 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 BHMG1C9JSJ3 638 aaPredicted RBP13.92□□□□□ -0.18
HIF3A-204ENST00000300862 ADRB2P07550 413 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 MESDQ14696 234 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 FAM102BQ5T8I3 360 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 PPM1KQ8N3J5 372 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 XXYLT1Q8NBI6 393 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 LRRC45Q96CN5 670 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 TMEM117Q9H0C3 514 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 ATP8A1Q9Y2Q0 1164 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 COL4A5P29400 1685 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 CCDC169A6NNP5 214 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 CYP26A1O43174 497 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 CALCAP01258 141 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 TNIP1Q15025 636 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 EPC2Q52LR7 807 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 TMC3Q7Z5M5 1100 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 SLC47A2Q86VL8 602 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 SYTL5Q8TDW5 730 aaPredicted RBP13.92□□□□□ -0.18
HIF3A-204ENST00000300862 ATP8B4Q8TF62 1192 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 SEMA4DQ92854 862 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 TMEM206Q9H813 350 aa13.92□□□□□ -0.18
HIF3A-204ENST00000300862 HMGB1P1B2RPK0 211 aaPredicted RBP13.91□□□□□ -0.18
HIF3A-204ENST00000300862 ANKRD63C9JTQ0 380 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 ASNSP08243 561 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 TMOD1P28289 359 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 RPS6P62753 249 aaKnown RBP13.91□□□□□ -0.18
HIF3A-204ENST00000300862 DR1Q01658 176 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 MKRN4PQ13434 485 aaPredicted RBP13.91□□□□□ -0.18
HIF3A-204ENST00000300862 NOP9Q86U38 636 aaKnown RBP13.91□□□□□ -0.18
HIF3A-204ENST00000300862 PRPF38AQ8NAV1 312 aaKnown RBP13.91□□□□□ -0.18
HIF3A-204ENST00000300862 C18orf8Q96DM3 657 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 PPANQ9NQ55 473 aaKnown RBP13.91□□□□□ -0.18
HIF3A-204ENST00000300862 TOPORSQ9NS56 1045 aaPredicted RBP13.91□□□□□ -0.18
HIF3A-204ENST00000300862 ATP8B3O60423 1300 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 ASTN2O75129 1339 aaPredicted RBP13.91□□□□□ -0.18
HIF3A-204ENST00000300862 ATXN2Q99700 1313 aaKnown RBP13.91□□□□□ -0.18
HIF3A-204ENST00000300862 WNT10BO00744 389 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 SORBS3O60504 671 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms