RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 PLS3P13797 630 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 RFX1P22670 979 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 MTMR1Q13613 665 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 ARHGEF19Q8IW93 802 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 CD302Q8IX05 232 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 ZSWIM2Q8NEG5 633 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 SYTL5Q8TDW5 730 aaPredicted RBP16.31■□□□□ 0.2
CCDC116-201ENST00000292779 SLC20A1Q8WUM9 679 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 LPAR1Q92633 364 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 AGPAT1Q99943 283 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 SLC38A10Q9HBR0 1119 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 GRIN2DO15399 1336 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 DDX3YO15523 660 aaKnown RBP16.31■□□□□ 0.2
CCDC116-201ENST00000292779 EIF2AK2P19525 551 aaKnown RBP16.31■□□□□ 0.2
CCDC116-201ENST00000292779 GCLMP48507 274 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 RPS6P62753 249 aaKnown RBP16.31■□□□□ 0.2
CCDC116-201ENST00000292779 SKOR1P84550 965 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 ALCAMQ13740 583 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 DCAF12L1Q5VU92 463 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 TRMT1LQ7Z2T5 733 aaKnown RBP16.31■□□□□ 0.2
CCDC116-201ENST00000292779 TAAR1Q96RJ0 339 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 KIAA1683Q9H0B3 1180 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 NEUROG2Q9H2A3 272 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 GGA3Q9NZ52 723 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 COG5Q9UP83 839 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 PLAAQ9Y263 795 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 EIF3HO15372 352 aaKnown RBP eCLIP16.3■□□□□ 0.2
CCDC116-201ENST00000292779 FGGP02679 453 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 YWHABP31946 246 aaKnown RBP16.3■□□□□ 0.2
CCDC116-201ENST00000292779 UGCGQ16739 394 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 C1orf220Q5T0J3 134 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 HAUS6Q7Z4H7 955 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 SLITRK6Q9H5Y7 841 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 HSPBP1Q9NZL4 362 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 ANKRD62A6NC57 917 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 TRIM66O15016 1216 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 TTI1O43156 1089 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 GHRHRQ02643 423 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 EPC2Q52LR7 807 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 C12orf56Q8IXR9 622 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 XXYLT1Q8NBI6 393 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 PLEKHO2Q8TD55 490 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 TMEM174Q8WUU8 243 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 GPRC5CQ9NQ84 441 aa16.3■□□□□ 0.2
CCDC116-201ENST00000292779 TTC7AQ9ULT0 858 aaPredicted RBP16.3■□□□□ 0.2
CCDC116-201ENST00000292779 BACH1O14867 736 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 SLC16A4O15374 487 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 LYPLA2O95372 231 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 HSD17B3P37058 310 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 ATP1A2P50993 1020 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 GTF2BQ00403 316 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 CETN1Q12798 172 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 NAA35Q5VZE5 725 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 MAATS1Q7Z4T9 603 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 CCDC26Q8TAB7 109 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 CELF4Q9BZC1 486 aaKnown RBP16.29■□□□□ 0.2
CCDC116-201ENST00000292779 RABEP2Q9H5N1 569 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 FEZ2Q9UHY8 353 aaPredicted RBP16.29■□□□□ 0.2
CCDC116-201ENST00000292779 NR2E1Q9Y466 385 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 DAPK3O43293 454 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 MYCLP12524 364 aaPredicted RBP16.29■□□□□ 0.2
CCDC116-201ENST00000292779 VCAM1P19320 739 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 PEX3P56589 373 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 PRPF4BQ13523 1007 aaKnown RBP16.29■□□□□ 0.2
CCDC116-201ENST00000292779 MTMR2Q13614 643 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 PGM5Q15124 567 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 C10orf67Q8IYJ2 551 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 TBC1D22BQ9NU19 505 aa16.29■□□□□ 0.2
CCDC116-201ENST00000292779 SSC5DA1L4H1 1573 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 P4HA2O15460 535 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 ATP9AO75110 1047 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 PDCLQ13371 301 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 UAP1Q16222 522 aaPredicted RBP16.28■□□□□ 0.2
CCDC116-201ENST00000292779 CEP85LQ5SZL2 805 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 BCAS4Q8TDM0 211 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 KAT5Q92993 513 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 RNPC3Q96LT9 517 aaKnown RBP16.28■□□□□ 0.2
CCDC116-201ENST00000292779 WDR81Q562E7 1941 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 GOLGA8IPA6NC78 632 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 GOLGA8JA6NMD2 632 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 CTNND1O60716 968 aaKnown RBP16.28■□□□□ 0.2
CCDC116-201ENST00000292779 FTLP02792 175 aaPredicted RBP16.28■□□□□ 0.2
CCDC116-201ENST00000292779 FLT3P36888 993 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 TNFAIP1Q13829 316 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 KDM7AQ6ZMT4 941 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 ADAT2Q7Z6V5 191 aaKnown RBP16.28■□□□□ 0.2
CCDC116-201ENST00000292779 RPUSD2Q8IZ73 545 aaKnown RBP16.28■□□□□ 0.2
CCDC116-201ENST00000292779 ATP6V1G3Q96LB4 118 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 TMEM117Q9H0C3 514 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 CARD9Q9H257 536 aa16.28■□□□□ 0.2
CCDC116-201ENST00000292779 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.28■□□□□ 0.2
CCDC116-201ENST00000292779 DIS3Q9Y2L1 958 aaKnown RBP16.28■□□□□ 0.2
CCDC116-201ENST00000292779 ADRB2P07550 413 aa16.27■□□□□ 0.2
CCDC116-201ENST00000292779 USP8P40818 1118 aa16.27■□□□□ 0.2
CCDC116-201ENST00000292779 CCT5P48643 541 aa16.27■□□□□ 0.2
CCDC116-201ENST00000292779 POU5F1Q01860 360 aaKnown RBP16.27■□□□□ 0.2
CCDC116-201ENST00000292779 ZNF211Q13398 564 aaPredicted RBP16.27■□□□□ 0.2
CCDC116-201ENST00000292779 PLA2G4FQ68DD2 849 aa16.27■□□□□ 0.2
CCDC116-201ENST00000292779 ZNF746Q6NUN9 644 aaPredicted RBP16.27■□□□□ 0.2
CCDC116-201ENST00000292779 RHOT2Q8IXI1 618 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms