RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 CUL1Q13616 776 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 TNIP1Q15025 636 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 PPP2R5AQ15172 486 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 FAM160B2Q86V87 743 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 C18orf8Q96DM3 657 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 TELO2Q9Y4R8 837 aa15.81■□□□□ 0.12
CNOT3-201ENST00000221232 TLDC2A0PJX2 215 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 E7EVH7 732 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 EGFRP00533 1210 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 QARSP47897 775 aaKnown RBP15.8■□□□□ 0.12
CNOT3-201ENST00000221232 ZNF844Q08AG5 666 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 RASGEF1CQ8N431 466 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 CLEC4DQ8WXI8 215 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 ACCSQ96QU6 501 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 AGO4Q9HCK5 861 aaKnown RBP15.8■□□□□ 0.12
CNOT3-201ENST00000221232 PTPN22Q9Y2R2 807 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 CTDP1Q9Y5B0 961 aaPredicted RBP15.8■□□□□ 0.12
CNOT3-201ENST00000221232 ANKRD62A6NC57 917 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 MYO1FO00160 1098 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 CES2O00748 559 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 PPP1R37O75864 691 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 ADRB2P07550 413 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 RPS6P62753 249 aaKnown RBP15.8■□□□□ 0.12
CNOT3-201ENST00000221232 SKOR1P84550 965 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 C1orf220Q5T0J3 134 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 B3GNT9Q6UX72 402 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 MREGQ8N565 214 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 XXYLT1Q8NBI6 393 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 DHX38Q92620 1227 aaKnown RBP15.8■□□□□ 0.12
CNOT3-201ENST00000221232 SEMA4DQ92854 862 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 RIT2Q99578 217 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 SYT11Q9BT88 431 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 TMEM117Q9H0C3 514 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 TMBIM4Q9HC24 238 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 INTUQ9ULD6 942 aa15.8■□□□□ 0.12
CNOT3-201ENST00000221232 CCDC188H7C350 402 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 CLSTN1O94985 981 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 ICAM1P05362 532 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 MMEP08473 750 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 CCDC172P0C7W6 258 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 DLATP10515 647 aaKnown RBP15.79■□□□□ 0.12
CNOT3-201ENST00000221232 DR1Q01658 176 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 IFFO1Q0D2I5 559 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 CETN1Q12798 172 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 C2CD6Q53TS8 623 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 CHADLQ6NUI6 762 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 SUPT20HQ8NEM7 779 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 LRRC45Q96CN5 670 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 CALR3Q96L12 384 aaKnown RBP15.79■□□□□ 0.12
CNOT3-201ENST00000221232 PI4K2AQ9BTU6 479 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 TCRBV7S2A1N4TA0A589 114 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 PLS3P13797 630 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 SSTR3P32745 418 aaPredicted RBP15.79■□□□□ 0.12
CNOT3-201ENST00000221232 PTGER2P43116 358 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 MAGEA9P43362 315 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 RASA3Q14644 834 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 KRT71Q3SY84 523 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 UBAP2Q5T6F2 1119 aaKnown RBP15.79■□□□□ 0.12
CNOT3-201ENST00000221232 PRAMEF18Q5VWM3 479 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 KDM7AQ6ZMT4 941 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 INTS8Q75QN2 995 aaKnown RBP15.79■□□□□ 0.12
CNOT3-201ENST00000221232 NOP9Q86U38 636 aaKnown RBP15.79■□□□□ 0.12
CNOT3-201ENST00000221232 PACS2Q86VP3 889 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 SYTL5Q8TDW5 730 aaPredicted RBP15.79■□□□□ 0.12
CNOT3-201ENST00000221232 WNK4Q96J92 1243 aa15.79■□□□□ 0.12
CNOT3-201ENST00000221232 H0YGN5 161 aa15.78■□□□□ 0.12
CNOT3-201ENST00000221232 WNT10BO00744 389 aa15.78■□□□□ 0.12
CNOT3-201ENST00000221232 COMTP21964 271 aa15.78■□□□□ 0.12
CNOT3-201ENST00000221232 KCNJ1P48048 391 aa15.78■□□□□ 0.12
CNOT3-201ENST00000221232 MXI1P50539 228 aa15.78■□□□□ 0.12
CNOT3-201ENST00000221232 LMBRD2Q68DH5 695 aaPredicted RBP15.78■□□□□ 0.12
CNOT3-201ENST00000221232 TTLL6Q8N841 843 aa15.78■□□□□ 0.12
CNOT3-201ENST00000221232 PRPF38AQ8NAV1 312 aaKnown RBP15.78■□□□□ 0.12
CNOT3-201ENST00000221232 STRA6Q9BX79 667 aa15.78■□□□□ 0.12
CNOT3-201ENST00000221232 NFS1Q9Y697 457 aa15.78■□□□□ 0.12
CNOT3-201ENST00000221232 MDH1P40925 334 aaKnown RBP15.78■□□□□ 0.12
CNOT3-201ENST00000221232 RMDN3Q96TC7 470 aa15.78■□□□□ 0.12
CNOT3-201ENST00000221232 GMLQ99445 158 aa15.78■□□□□ 0.12
CNOT3-201ENST00000221232 TMEM206Q9H813 350 aa15.78■□□□□ 0.12
CNOT3-201ENST00000221232 CNOT8Q9UFF9 292 aaKnown RBP15.78■□□□□ 0.12
CNOT3-201ENST00000221232 DAAM1Q9Y4D1 1078 aa15.78■□□□□ 0.12
CNOT3-201ENST00000221232 SHBGP04278 402 aa15.77■□□□□ 0.12
CNOT3-201ENST00000221232 ASNSP08243 561 aa15.77■□□□□ 0.12
CNOT3-201ENST00000221232 HSD17B4P51659 736 aa15.77■□□□□ 0.12
CNOT3-201ENST00000221232 MAGOHP61326 146 aaKnown RBP15.77■□□□□ 0.12
CNOT3-201ENST00000221232 KIF22Q14807 665 aa15.77■□□□□ 0.12
CNOT3-201ENST00000221232 TMC3Q7Z5M5 1100 aa15.77■□□□□ 0.12
CNOT3-201ENST00000221232 MDM1Q8TC05 714 aa15.77■□□□□ 0.12
CNOT3-201ENST00000221232 MAGOHBQ96A72 148 aaKnown RBP15.77■□□□□ 0.12
CNOT3-201ENST00000221232 KREMEN1Q96MU8 473 aa15.77■□□□□ 0.12
CNOT3-201ENST00000221232 BRWD3Q6RI45 1802 aa15.77■□□□□ 0.12
CNOT3-201ENST00000221232 CCNE2O96020 404 aa15.77■□□□□ 0.12
CNOT3-201ENST00000221232 ANXA13P27216 316 aa15.77■□□□□ 0.12
CNOT3-201ENST00000221232 NFIL3Q16649 462 aa15.77■□□□□ 0.12
CNOT3-201ENST00000221232 RNF187Q5TA31 235 aaPredicted RBP15.77■□□□□ 0.12
CNOT3-201ENST00000221232 ZDHHC14Q8IZN3 488 aa15.77■□□□□ 0.12
CNOT3-201ENST00000221232 FMO2Q99518 471 aa15.77■□□□□ 0.12
CNOT3-201ENST00000221232 SLITRK6Q9H5Y7 841 aa15.77■□□□□ 0.12
CNOT3-201ENST00000221232 KCND2Q9NZV8 630 aa15.77■□□□□ 0.12
CNOT3-201ENST00000221232 ASTN2O75129 1339 aaPredicted RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms