RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 CPB2Q96IY4 423 aa29.32■■■□□ 2.28
STUB1-201ENST00000219548 TMEM134Q9H6X4 195 aa29.32■■■□□ 2.28
STUB1-201ENST00000219548 AGPAT5Q9NUQ2 364 aa29.32■■■□□ 2.28
STUB1-201ENST00000219548 GCNT3O95395 438 aa29.31■■■□□ 2.28
STUB1-201ENST00000219548 MYBP10242 640 aa29.31■■■□□ 2.28
STUB1-201ENST00000219548 PPP4R3CPQ6ZMV5 832 aa29.31■■■□□ 2.28
STUB1-201ENST00000219548 LINC01599Q8WXQ3 324 aa29.31■■■□□ 2.28
STUB1-201ENST00000219548 UBE2OQ9C0C9 1292 aaKnown RBP29.31■■■□□ 2.28
STUB1-201ENST00000219548 CLSTN2Q9H4D0 955 aa29.31■■■□□ 2.28
STUB1-201ENST00000219548 H0YCG3 227 aa29.3■■■□□ 2.28
STUB1-201ENST00000219548 MBD3O95983 291 aa29.3■■■□□ 2.28
STUB1-201ENST00000219548 IKBKEQ14164 716 aa29.3■■■□□ 2.28
STUB1-201ENST00000219548 FAM187BQ17R55 369 aa29.3■■■□□ 2.28
STUB1-201ENST00000219548 C9orf50Q5SZB4 431 aa29.3■■■□□ 2.28
STUB1-201ENST00000219548 PRIMPOLQ96LW4 560 aa29.3■■■□□ 2.28
STUB1-201ENST00000219548 SLC39A2Q9NP94 309 aa29.3■■■□□ 2.28
STUB1-201ENST00000219548 PCDHA5Q9Y5H7 936 aa29.3■■■□□ 2.28
STUB1-201ENST00000219548 ACKR2O00590 384 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 PPP1R37O75864 691 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 ACTN1P12814 892 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 ARF4P18085 180 aaPredicted RBP29.29■■■□□ 2.28
STUB1-201ENST00000219548 HOXA11P31270 313 aaPredicted RBP29.29■■■□□ 2.28
STUB1-201ENST00000219548 GTF2BQ00403 316 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 STRN3Q13033 797 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 PRPF4BQ13523 1007 aaKnown RBP29.29■■■□□ 2.28
STUB1-201ENST00000219548 PCBP1Q15365 356 aaKnown RBP eCLIP29.29■■■□□ 2.28
STUB1-201ENST00000219548 RTN4RL1Q86UN2 441 aaPredicted RBP29.29■■■□□ 2.28
STUB1-201ENST00000219548 SLC17A8Q8NDX2 589 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 SMARCE1Q969G3 411 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 ADAM2Q99965 735 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 FTHL17Q9BXU8 183 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 ST6GALNAC4Q9H4F1 302 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 TBX20Q9UMR3 447 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 CNTNAP2Q9UHC6 1331 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 TTC3P53804 2025 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 DSC3Q14574 896 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 NT5DC1Q5TFE4 455 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 CDR2LQ86X02 465 aaPredicted RBP29.29■■■□□ 2.28
STUB1-201ENST00000219548 CCDC47Q96A33 483 aaKnown RBP29.29■■■□□ 2.28
STUB1-201ENST00000219548 NUP62CLQ9H1M0 184 aa29.29■■■□□ 2.28
STUB1-201ENST00000219548 LAMA3Q16787 3333 aa29.28■■■□□ 2.28
STUB1-201ENST00000219548 SMC2O95347 1197 aa29.28■■■□□ 2.28
STUB1-201ENST00000219548 ZSCAN20P17040 1043 aaPredicted RBP29.28■■■□□ 2.28
STUB1-201ENST00000219548 KCNA1Q09470 495 aa29.28■■■□□ 2.28
STUB1-201ENST00000219548 STK4Q13043 487 aa29.28■■■□□ 2.28
STUB1-201ENST00000219548 TMEM132AQ24JP5 1023 aa29.28■■■□□ 2.28
STUB1-201ENST00000219548 KCNN1Q92952 543 aa29.28■■■□□ 2.28
STUB1-201ENST00000219548 STRA6Q9BX79 667 aa29.28■■■□□ 2.28
STUB1-201ENST00000219548 CXXC1Q9P0U4 656 aaPredicted RBP29.28■■■□□ 2.28
STUB1-201ENST00000219548 ZBBXA8MT70 800 aa29.27■■■□□ 2.28
STUB1-201ENST00000219548 PRPF6O94906 941 aaKnown RBP29.27■■■□□ 2.28
STUB1-201ENST00000219548 RHOBTB3O94955 611 aa29.27■■■□□ 2.28
STUB1-201ENST00000219548 KCNB1Q14721 858 aa29.27■■■□□ 2.28
STUB1-201ENST00000219548 SHHQ15465 462 aa29.27■■■□□ 2.28
STUB1-201ENST00000219548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.27■■■□□ 2.282e-7■■□□□ 13.5
STUB1-201ENST00000219548 KIAA0895Q8NCT3 520 aa29.27■■■□□ 2.28
STUB1-201ENST00000219548 SPATA20Q8TB22 786 aa29.27■■■□□ 2.28
STUB1-201ENST00000219548 TARS2Q9BW92 718 aaKnown RBP29.27■■■□□ 2.28
STUB1-201ENST00000219548 ABHD14A-ACY1A0A1B0GW23 586 aa29.26■■■□□ 2.27
STUB1-201ENST00000219548 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.26■■■□□ 2.27
STUB1-201ENST00000219548 BAIAP3O94812 1187 aa29.26■■■□□ 2.27
STUB1-201ENST00000219548 IBSPP21815 317 aaPredicted RBP29.26■■■□□ 2.27
STUB1-201ENST00000219548 NCBP1Q09161 790 aaKnown RBP29.26■■■□□ 2.27
STUB1-201ENST00000219548 TWF2Q6IBS0 349 aaKnown RBP29.26■■■□□ 2.27
STUB1-201ENST00000219548 CHRDL2Q6WN34 429 aa29.26■■■□□ 2.27
STUB1-201ENST00000219548 MAP4K3Q8IVH8 894 aa29.26■■■□□ 2.27
STUB1-201ENST00000219548 HERVK_113Q902F9 699 aa29.26■■■□□ 2.27
STUB1-201ENST00000219548 MRPL4Q9BYD3 311 aaKnown RBP29.26■■■□□ 2.27
STUB1-201ENST00000219548 TSPYL2Q9H2G4 693 aaPredicted RBP29.26■■■□□ 2.27
STUB1-201ENST00000219548 IKZF4Q9H2S9 585 aa29.26■■■□□ 2.27
STUB1-201ENST00000219548 CHST12Q9NRB3 414 aa29.26■■■□□ 2.27
STUB1-201ENST00000219548 ENPP3O14638 875 aa29.25■■■□□ 2.27
STUB1-201ENST00000219548 SCP2P22307 547 aa29.25■■■□□ 2.27
STUB1-201ENST00000219548 AXLP30530 894 aa29.25■■■□□ 2.27
STUB1-201ENST00000219548 WDR5P61964 334 aaKnown RBP29.25■■■□□ 2.27
STUB1-201ENST00000219548 NOTUMQ6P988 496 aa29.25■■■□□ 2.27
STUB1-201ENST00000219548 EPM2AIP1Q7L775 607 aaPredicted RBP29.25■■■□□ 2.27
STUB1-201ENST00000219548 BICD1Q96G01 975 aa29.25■■■□□ 2.27
STUB1-201ENST00000219548 GSDMAQ96QA5 445 aa29.25■■■□□ 2.27
STUB1-201ENST00000219548 PDZD7Q9H5P4 517 aa29.25■■■□□ 2.27
STUB1-201ENST00000219548 GDAQ9Y2T3 454 aa29.25■■■□□ 2.27
STUB1-201ENST00000219548 PCDHB13Q9Y5F0 798 aa29.25■■■□□ 2.27
STUB1-201ENST00000219548 SARSP49591 514 aaKnown RBP29.24■■■□□ 2.27
STUB1-201ENST00000219548 DEFB103AP81534 67 aa29.24■■■□□ 2.27
STUB1-201ENST00000219548 PSMD2Q13200 908 aa29.24■■■□□ 2.27
STUB1-201ENST00000219548 ALCAMQ13740 583 aa29.24■■■□□ 2.27
STUB1-201ENST00000219548 L1TD1Q5T7N2 865 aaKnown RBP29.24■■■□□ 2.27
STUB1-201ENST00000219548 ATF7IP2Q5U623 682 aa29.24■■■□□ 2.27
STUB1-201ENST00000219548 EEF1DP3Q658K8 133 aa29.24■■■□□ 2.27
STUB1-201ENST00000219548 HVCN1Q96D96 273 aa29.24■■■□□ 2.27
STUB1-201ENST00000219548 ACO2Q99798 780 aaKnown RBP29.24■■■□□ 2.27
STUB1-201ENST00000219548 RGS18Q9NS28 235 aa29.24■■■□□ 2.27
STUB1-201ENST00000219548 A0A1B0GUA9 196 aa29.23■■■□□ 2.27
STUB1-201ENST00000219548 ABCD1P33897 745 aa29.23■■■□□ 2.27
STUB1-201ENST00000219548 ISM2Q6H9L7 571 aa29.23■■■□□ 2.27
STUB1-201ENST00000219548 STXBP4Q6ZWJ1 553 aa29.23■■■□□ 2.27
STUB1-201ENST00000219548 SCFD1Q8WVM8 642 aa29.23■■■□□ 2.27
STUB1-201ENST00000219548 EIF2AQ9BY44 585 aaKnown RBP29.23■■■□□ 2.27
STUB1-201ENST00000219548 RMND1Q9NWS8 449 aa29.23■■■□□ 2.27
STUB1-201ENST00000219548 MAN1B1Q9UKM7 699 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms