RNA–Protein interactions for RNA: ENST00000013070.10

UBR7-201, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR7, Length 3,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-201ENST00000013070 PRELID2Q8N945 189 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
UBR7-201ENST00000013070 CEP83Q9Y592 693 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 THAP12O43422 761 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 STX2P32856 288 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 ADCY8P40145 1251 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 KCNJ2P63252 427 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 GABPAQ06546 454 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 ABCB5Q2M3G0 1257 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 C6orf118Q5T5N4 469 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 SYDE2Q5VT97 1194 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 DUPD1Q68J44 220 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 TTC27Q6P3X3 843 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 ZSWIM2Q8NEG5 633 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 ZNF577Q9BSK1 485 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 NUP85Q9BW27 656 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.88□□□□□ -0.19
UBR7-201ENST00000013070 CNTNAP4Q9C0A0 1308 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 TMEM120BA0PK00 339 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 CCT6BQ92526 530 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 SAAL1Q96ER3 474 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 CBWD1Q9BRT8 395 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 GLT8D2Q9H1C3 349 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 TRIM33Q9UPN9 1127 aa13.88□□□□□ -0.19
UBR7-201ENST00000013070 PPFIA2O75334 1257 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 IL1R1P14778 569 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 GPC5P78333 572 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 ELF3P78545 371 aaPredicted RBP13.87□□□□□ -0.19
UBR7-201ENST00000013070 HYIQ5T013 277 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 ARMC9Q7Z3E5 817 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 CPXCR1Q8N123 301 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 RASGEF1CQ8N431 466 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 RSRC1Q96IZ7 334 aaKnown RBP13.87□□□□□ -0.19
UBR7-201ENST00000013070 C9orf72Q96LT7 481 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 HOMER3Q9NSC5 361 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.87□□□□□ -0.19
UBR7-201ENST00000013070 TRPC6Q9Y210 931 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 STXBP5LQ9Y2K9 1186 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 ROBO1Q9Y6N7 1651 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 TOM1O60784 492 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 HIP1RO75146 1068 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 PHF2O75151 1096 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 ECEL1O95672 775 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 BMP3P12645 472 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 NT5C2P49902 561 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 JAM2P57087 298 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 SPIRE1Q08AE8 756 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 BFSP1Q12934 665 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 TRIM68Q6AZZ1 485 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 PRUNE1Q86TP1 453 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 ECT2Q9H8V3 914 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 MYO3BQ8WXR4 1341 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 PASKQ96RG2 1323 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 CES2O00748 559 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 SLITRK3O94933 977 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 ADCY2Q08462 1091 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 AP3B2Q13367 1082 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 DRP2Q13474 957 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 RNF207Q6ZRF8 634 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 SLFN11Q7Z7L1 901 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 SLC47A2Q86VL8 602 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 FAM228AQ86W67 206 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 ZNF564Q8TBZ8 553 aaPredicted RBP13.87□□□□□ -0.19
UBR7-201ENST00000013070 MICAL1Q8TDZ2 1067 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 NSMCE1Q8WV22 266 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 FAM20AQ96MK3 541 aa13.87□□□□□ -0.19
UBR7-201ENST00000013070 SYNGAP1Q96PV0 1343 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 A8MUI8 341 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 PPEF1O14829 653 aaPredicted RBP13.86□□□□□ -0.19
UBR7-201ENST00000013070 ATP6V1G2O95670 118 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 GH1P01241 217 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 SLC8A1P32418 973 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 CRKP46108 304 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 LXNQ9BS40 222 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 TDRD3Q9H7E2 651 aaKnown RBP13.86□□□□□ -0.19
UBR7-201ENST00000013070 ARAP2Q8WZ64 1704 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 A0A1B0GUA9 196 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 BTNL10A8MVZ5 291 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 SLC16A3O15427 465 aaKnown RBP13.86□□□□□ -0.19
UBR7-201ENST00000013070 BRAFP15056 766 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 GAP43P17677 238 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 CHRNA3P32297 505 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 ECE1P42892 770 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 KRT17Q04695 432 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 DDR1Q08345 913 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 KAZNQ674X7 775 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 LLGL2Q6P1M3 1020 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 RHOT2Q8IXI1 618 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 FAM167BQ9BTA0 163 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 PNMA3Q9UL41 463 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 SCAF8Q9UPN6 1271 aaKnown RBP13.86□□□□□ -0.19
UBR7-201ENST00000013070 IGF2BP3O00425 579 aaKnown RBP eCLIP13.86□□□□□ -0.19
UBR7-201ENST00000013070 DIAPH2O60879 1101 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 SPAG7O75391 227 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 RARAP10276 462 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 MXI1P50539 228 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 DHX34Q14147 1143 aaKnown RBP13.86□□□□□ -0.19
UBR7-201ENST00000013070 ZDHHC24Q6UX98 284 aa13.86□□□□□ -0.19
UBR7-201ENST00000013070 DHX38Q92620 1227 aaKnown RBP13.86□□□□□ -0.19
UBR7-201ENST00000013070 ZSWIM1Q9BR11 485 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms