RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 C6orf118Q5T5N4 469 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 RNF43Q68DV7 783 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 FITM2Q8N6M3 262 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 DYDC1Q8WWB3 177 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 UTP4Q969X6 686 aaKnown RBP13.07□□□□□ -0.32
GFAP-228ENST00000638488 TMEM109Q9BVC6 243 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 IQCGQ9H095 443 aaKnown RBP13.07□□□□□ -0.32
GFAP-228ENST00000638488 TMEM60Q9H2L4 133 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 SEC63Q9UGP8 760 aaKnown RBP13.07□□□□□ -0.32
GFAP-228ENST00000638488 PNMA3Q9UL41 463 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 CDK5RAP2Q96SN8 1893 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 KLRG2A4D1S0 409 aaPredicted RBP13.07□□□□□ -0.32
GFAP-228ENST00000638488 SMCO2A6NFE2 343 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 LRRC53A6NM62 1247 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 BTNL10A8MVZ5 291 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 SKIP12755 728 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 TRAPPC10P48553 1259 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 RPS6KA1Q15418 735 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 CNGA2Q16280 664 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 LETM2Q2VYF4 491 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 PDXDC1Q6P996 788 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 NEK9Q8TD19 979 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 BAP1Q92560 729 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 P2RX5Q93086 422 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 NUDCD1Q96RS6 583 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 FMO2Q99518 471 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 PREBQ9HCU5 417 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 GPCPD1Q9NPB8 672 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 SH3GLB2Q9NR46 395 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 PCDHAC2Q9Y5I4 1007 aa13.07□□□□□ -0.32
GFAP-228ENST00000638488 ABCB11O95342 1321 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 MAGEA13PA6NCF6 341 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 NVLO15381 856 aaKnown RBP13.06□□□□□ -0.32
GFAP-228ENST00000638488 CCDC166P0CW27 439 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 PABPC4Q13310 644 aaKnown RBP eCLIP13.06□□□□□ -0.32
GFAP-228ENST00000638488 BTNL9Q6UXG8 535 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 TAOK1Q7L7X3 1001 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 KIAA0825Q8IV33 1275 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 PHC3Q8NDX5 983 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 FBXO41Q8TF61 875 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 INPP5DQ92835 1189 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 GBP5Q96PP8 586 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 PABPC3Q9H361 631 aaKnown RBP13.06□□□□□ -0.32
GFAP-228ENST00000638488 ETNK1Q9HBU6 452 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 LRRC4CQ9HCJ2 640 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 SMAPO00193 183 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 KLRC4O43908 158 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 CCNT1O60563 726 aaKnown RBP13.06□□□□□ -0.32
GFAP-228ENST00000638488 DNA2P51530 1060 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 USP11P51784 963 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 OCRLQ01968 901 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 TCP10Q12799 353 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 MKRN3Q13064 507 aaKnown RBP13.06□□□□□ -0.32
GFAP-228ENST00000638488 ACVR2BQ13705 512 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 TNFAIP8L3Q5GJ75 292 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 SH2D4BQ5SQS7 431 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 SOGA3Q5TF21 947 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 CHADLQ6NUI6 762 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 DTHD1Q6ZMT9 781 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 RRAGAQ7L523 313 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 LONP2Q86WA8 852 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 SYN2Q92777 582 aaPredicted RBP13.06□□□□□ -0.32
GFAP-228ENST00000638488 PPP1R14BQ96C90 147 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.06□□□□□ -0.32
GFAP-228ENST00000638488 STOML1Q9UBI4 398 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 BIN2Q9UBW5 565 aaPredicted RBP13.06□□□□□ -0.32
GFAP-228ENST00000638488 CNOT7Q9UIV1 285 aaKnown RBP13.06□□□□□ -0.32
GFAP-228ENST00000638488 GGT7Q9UJ14 662 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 TRIM33Q9UPN9 1127 aa13.06□□□□□ -0.32
GFAP-228ENST00000638488 UTP11Q9Y3A2 253 aaKnown RBP13.06□□□□□ -0.32
GFAP-228ENST00000638488 FAM196BA6NMK8 535 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 KCNK3O14649 394 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 VHLP40337 213 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 CACNA2D1P54289 1103 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 ZRSR2Q15696 482 aaKnown RBP13.05□□□□□ -0.32
GFAP-228ENST00000638488 HGSNATQ68CP4 663 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 DENND2CQ68D51 928 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 TMC4Q7Z404 712 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 HAPLN3Q96S86 360 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 EPB41L4BQ9H329 900 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 AIPL1Q9NZN9 384 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 ATP8A1Q9Y2Q0 1164 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 SIGLEC16A6NMB1 481 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 EPHB6O15197 1021 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 ECE2O60344 883 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 TMCC1O94876 653 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 LONP1P36776 959 aaKnown RBP13.05□□□□□ -0.32
GFAP-228ENST00000638488 INHBCP55103 352 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 RNASE9P60153 205 aaKnown RBP13.05□□□□□ -0.32
GFAP-228ENST00000638488 NFIAQ12857 509 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 SF3A3Q12874 501 aaKnown RBP eCLIP13.05□□□□□ -0.32
GFAP-228ENST00000638488 GSTA3Q16772 222 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 SLC9C1Q4G0N8 1177 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 VWA3BQ502W6 1294 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 ZNF365Q70YC5 407 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 C4orf32Q8N8J7 132 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 STKLD1Q8NE28 680 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 UCMAQ8WVF2 138 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
GFAP-228ENST00000638488 COA7Q96BR5 231 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms